RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 FASLGP48023 281 aa10.85□□□□□ -0.67
VCP-204ENST00000466100 GLRBP48167 497 aa10.85□□□□□ -0.67
VCP-204ENST00000466100 MAZP56270 477 aaKnown RBP10.85□□□□□ -0.67
VCP-204ENST00000466100 N4BP2L1Q5TBK1 243 aaPredicted RBP10.85□□□□□ -0.67
VCP-204ENST00000466100 C16orf46Q6P387 395 aa10.85□□□□□ -0.67
VCP-204ENST00000466100 UBE2R2Q712K3 238 aaPredicted RBP10.85□□□□□ -0.67
VCP-204ENST00000466100 DCUN1D3Q8IWE4 304 aa10.85□□□□□ -0.67
VCP-204ENST00000466100 SLC35F3Q8IY50 421 aa10.85□□□□□ -0.67
VCP-204ENST00000466100 TBC1D21Q8IYX1 336 aa10.85□□□□□ -0.67
VCP-204ENST00000466100 ARL10Q8N8L6 244 aa10.85□□□□□ -0.67
VCP-204ENST00000466100 FAM181AQ8N9Y4 354 aa10.85□□□□□ -0.67
VCP-204ENST00000466100 PHC3Q8NDX5 983 aa10.85□□□□□ -0.67
VCP-204ENST00000466100 FOPNLQ96NB1 174 aa10.85□□□□□ -0.67
VCP-204ENST00000466100 TWSG1Q9GZX9 223 aa10.85□□□□□ -0.67
VCP-204ENST00000466100 MVB12BQ9H7P6 319 aa10.85□□□□□ -0.67
VCP-204ENST00000466100 RDH14Q9HBH5 336 aa10.85□□□□□ -0.67
VCP-204ENST00000466100 PARVBQ9HBI1 364 aa10.85□□□□□ -0.67
VCP-204ENST00000466100 SLC40A1Q9NP59 571 aa10.85□□□□□ -0.67
VCP-204ENST00000466100 POT1Q9NUX5 634 aa10.85□□□□□ -0.67
VCP-204ENST00000466100 IMP3Q9NV31 184 aaKnown RBP10.85□□□□□ -0.67
VCP-204ENST00000466100 XPR1Q9UBH6 696 aa10.85□□□□□ -0.67
VCP-204ENST00000466100 CPNE7Q9UBL6 633 aa10.85□□□□□ -0.67
VCP-204ENST00000466100 DCDC2Q9UHG0 476 aa10.85□□□□□ -0.67
VCP-204ENST00000466100 DOLKQ9UPQ8 538 aa10.85□□□□□ -0.67
VCP-204ENST00000466100 ASF1AQ9Y294 204 aa10.85□□□□□ -0.67
VCP-204ENST00000466100 BTBD3Q9Y2F9 522 aa10.85□□□□□ -0.67
VCP-204ENST00000466100 PLLPQ9Y342 182 aa10.85□□□□□ -0.67
VCP-204ENST00000466100 OARD1Q9Y530 152 aa10.85□□□□□ -0.67
VCP-204ENST00000466100 HEBP2Q9Y5Z4 205 aa10.85□□□□□ -0.67
VCP-204ENST00000466100 CNOT1A5YKK6 2376 aaKnown RBP10.85□□□□□ -0.67
VCP-204ENST00000466100 SIGLEC6O43699 453 aa10.84□□□□□ -0.67
VCP-204ENST00000466100 ERGP11308 486 aa10.84□□□□□ -0.67
VCP-204ENST00000466100 CD59P13987 128 aa10.84□□□□□ -0.67
VCP-204ENST00000466100 ETV4P43268 484 aa10.84□□□□□ -0.67
VCP-204ENST00000466100 CCT5P48643 541 aa10.84□□□□□ -0.67
VCP-204ENST00000466100 KPNA2P52292 529 aaKnown RBP10.84□□□□□ -0.67
VCP-204ENST00000466100 SLC18A1P54219 525 aa10.84□□□□□ -0.67
VCP-204ENST00000466100 ATXN3P54252 364 aaPredicted RBP10.84□□□□□ -0.67
VCP-204ENST00000466100 CDKL1Q00532 357 aa10.84□□□□□ -0.67
VCP-204ENST00000466100 PROX2Q3B8N5 592 aa10.84□□□□□ -0.67
VCP-204ENST00000466100 C14orf28Q4W4Y0 310 aa10.84□□□□□ -0.67
VCP-204ENST00000466100 ZCCHC8Q6NZY4 707 aaKnown RBP10.84□□□□□ -0.67
VCP-204ENST00000466100 KLC3Q6P597 504 aa10.84□□□□□ -0.67
VCP-204ENST00000466100 ZNF438Q7Z4V0 828 aa10.84□□□□□ -0.67
VCP-204ENST00000466100 ARL14Q8N4G2 192 aa10.84□□□□□ -0.67
VCP-204ENST00000466100 PDPRQ8NCN5 879 aa10.84□□□□□ -0.67
VCP-204ENST00000466100 CFAP61Q8NHU2 1237 aa10.84□□□□□ -0.67
VCP-204ENST00000466100 STAG3L4Q8TBR4 150 aa10.84□□□□□ -0.67
VCP-204ENST00000466100 MAPK15Q8TD08 544 aa10.84□□□□□ -0.67
VCP-204ENST00000466100 TCP10LQ8TDR4 215 aa10.84□□□□□ -0.67
VCP-204ENST00000466100 DENND1AQ8TEH3 1009 aa10.84□□□□□ -0.67
VCP-204ENST00000466100 SKA2Q8WVK7 121 aaPredicted RBP10.84□□□□□ -0.67
VCP-204ENST00000466100 CAMK1GQ96NX5 476 aa10.84□□□□□ -0.67
VCP-204ENST00000466100 NRTNQ99748 197 aa10.84□□□□□ -0.67
VCP-204ENST00000466100 MRPL57Q9BQC6 102 aaKnown RBP10.84□□□□□ -0.67
VCP-204ENST00000466100 HGH1Q9BTY7 390 aa10.84□□□□□ -0.67
VCP-204ENST00000466100 DUSP23Q9BVJ7 150 aa10.84□□□□□ -0.67
VCP-204ENST00000466100 MRPL46Q9H2W6 279 aaKnown RBP10.84□□□□□ -0.67
VCP-204ENST00000466100 TRIT1Q9H3H1 467 aaKnown RBP10.84□□□□□ -0.67
VCP-204ENST00000466100 KIR3DX1Q9H7L2 352 aa10.84□□□□□ -0.67
VCP-204ENST00000466100 MED4Q9NPJ6 270 aa10.84□□□□□ -0.67
VCP-204ENST00000466100 TMEM9BQ9NQ34 198 aa10.84□□□□□ -0.67
VCP-204ENST00000466100 SIRPGQ9P1W8 387 aa10.84□□□□□ -0.67
VCP-204ENST00000466100 SLC17A7Q9P2U7 560 aa10.84□□□□□ -0.67
VCP-204ENST00000466100 DCHS1Q96JQ0 3298 aa10.84□□□□□ -0.67
VCP-204ENST00000466100 TRBV23OR9-2A0A075B6M9 112 aa10.83□□□□□ -0.68
VCP-204ENST00000466100 UBXN8O00124 270 aa10.83□□□□□ -0.68
VCP-204ENST00000466100 PPM1DO15297 605 aa10.83□□□□□ -0.68
VCP-204ENST00000466100 KLK8O60259 260 aa10.83□□□□□ -0.68
VCP-204ENST00000466100 FOXD2O60548 495 aaPredicted RBP10.83□□□□□ -0.68
VCP-204ENST00000466100 RPN2P04844 631 aa10.83□□□□□ -0.68
VCP-204ENST00000466100 RBP1P09455 135 aa10.83□□□□□ -0.68
VCP-204ENST00000466100 ALPPL2P10696 532 aa10.83□□□□□ -0.68
VCP-204ENST00000466100 CYP2A7P20853 494 aa10.83□□□□□ -0.68
VCP-204ENST00000466100 NDUFS1P28331 727 aa10.83□□□□□ -0.68
VCP-204ENST00000466100 RPA3P35244 121 aaPredicted RBP10.83□□□□□ -0.68
VCP-204ENST00000466100 AP1S2P56377 157 aa10.83□□□□□ -0.68
VCP-204ENST00000466100 SLC14A1Q13336 389 aa10.83□□□□□ -0.68
VCP-204ENST00000466100 GPR18Q14330 331 aa10.83□□□□□ -0.68
VCP-204ENST00000466100 NR1D2Q14995 579 aa10.83□□□□□ -0.68
VCP-204ENST00000466100 TGFBIQ15582 683 aa10.83□□□□□ -0.68
VCP-204ENST00000466100 ZXDCQ2QGD7 858 aaPredicted RBP10.83□□□□□ -0.68
VCP-204ENST00000466100 CCDC153Q494R4 210 aa10.83□□□□□ -0.68
VCP-204ENST00000466100 CDKL4Q5MAI5 379 aa10.83□□□□□ -0.68
VCP-204ENST00000466100 MBOAT1Q6ZNC8 495 aa10.83□□□□□ -0.68
VCP-204ENST00000466100 SLC9B2Q86UD5 537 aa10.83□□□□□ -0.68
VCP-204ENST00000466100 GPSM1Q86YR5 675 aa10.83□□□□□ -0.68
VCP-204ENST00000466100 RBM12BQ8IXT5 1001 aaKnown RBP10.83□□□□□ -0.68
VCP-204ENST00000466100 GOLGA6L1Q8N7Z2 621 aa10.83□□□□□ -0.68
VCP-204ENST00000466100 AVL9Q8NBF6 648 aa10.83□□□□□ -0.68
VCP-204ENST00000466100 OR52E1Q8NGJ3 308 aa10.83□□□□□ -0.68
VCP-204ENST00000466100 OR9A1PQ8NGU1 263 aa10.83□□□□□ -0.68
VCP-204ENST00000466100 BAHD1Q8TBE0 780 aaPredicted RBP10.83□□□□□ -0.68
VCP-204ENST00000466100 ZFPM2Q8WW38 1151 aa10.83□□□□□ -0.68
VCP-204ENST00000466100 CXorf40BQ96DE9 158 aa10.83□□□□□ -0.68
VCP-204ENST00000466100 APOLD1Q96LR9 279 aa10.83□□□□□ -0.68
VCP-204ENST00000466100 TSNARE1Q96NA8 513 aa10.83□□□□□ -0.68
VCP-204ENST00000466100 FAM111AQ96PZ2 611 aa10.83□□□□□ -0.68
VCP-204ENST00000466100 FERD3LQ96RJ6 166 aa10.83□□□□□ -0.68
VCP-204ENST00000466100 PKP4Q99569 1192 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms