RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 CCDC81Q6ZN84 652 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 USP43Q70EL4 1123 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 SNX20Q7Z614 316 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 TSPYL5Q86VY4 417 aaPredicted RBP7.15□□□□□ -1.26
USP48-206ENST00000464577 CYP4Z1Q86W10 505 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 METTL23Q86XA0 190 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 C3orf58Q8NDZ4 430 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 OR52B6Q8NGF0 335 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 LILRB4Q8NHJ6 448 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 SCAMP5Q8TAC9 235 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 HTRA1Q92743 480 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 PROX1Q92786 737 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 CEP295NLQ96MC4 621 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 TRIB3Q96RU7 358 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 SEMA3CQ99985 751 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 OR2B2Q9GZK3 357 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 TP63Q9H3D4 680 aaPredicted RBP7.15□□□□□ -1.26
USP48-206ENST00000464577 RIBC2Q9H4K1 309 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 IKZF5Q9H5V7 419 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 TM9SF3Q9HD45 589 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 C1orf109Q9NX04 203 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 VNN3Q9NY84 501 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 EVLQ9UI08 416 aaPredicted RBP7.15□□□□□ -1.26
USP48-206ENST00000464577 SLCO3A1Q9UIG8 710 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 INVSQ9Y283 1065 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 TLR6Q9Y2C9 796 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 ASB1Q9Y576 335 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 GMPPBQ9Y5P6 360 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 COMMD10Q9Y6G5 202 aa7.15□□□□□ -1.26
USP48-206ENST00000464577 ANKRD34BA5PLL1 514 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 SLC28A1O00337 649 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 OR7A17O14581 309 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 TNFRSF10BO14763 440 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 HAT1O14929 419 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 TBX1O43435 398 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 RGS14O43566 566 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 SEC22BO75396 215 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 ERN1O75460 977 aaKnown RBP7.15□□□□□ -1.27
USP48-206ENST00000464577 OTCP00480 354 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 THP07101 528 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 SERPINF2P08697 491 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 FPR1P21462 350 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 ETV6P41212 452 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 DGCR6Q14129 220 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 GALNT3Q14435 633 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 PTPRNQ16849 979 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 PROX2Q3B8N5 592 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 FAM174BQ3ZCQ3 159 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 RFTN2Q52LD8 501 aaPredicted RBP7.15□□□□□ -1.27
USP48-206ENST00000464577 TIGD5Q53EQ6 642 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 COLEC12Q5KU26 742 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 LRIF1Q5T3J3 769 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 GOLGA7Q7Z5G4 137 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 ELMOD1Q8N336 334 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 AMER2Q8N7J2 671 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 ZNF540Q8NDQ6 660 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 KBTBD8Q8NFY9 601 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 OR4F6Q8NGB9 312 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 CD200R1Q8TD46 325 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 CAPSLQ8WWF8 208 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 KCNJ9Q92806 393 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 RPL3LQ92901 407 aaKnown RBP7.15□□□□□ -1.27
USP48-206ENST00000464577 LINGO1Q96FE5 620 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 TBCDQ9BTW9 1192 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 DPY30Q9C005 99 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 CLMPQ9H6B4 373 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 NEK6Q9HC98 313 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 TMLHEQ9NVH6 421 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 CACNG4Q9UBN1 327 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 NUDT5Q9UKK9 219 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 SAMD4AQ9UPU9 718 aaKnown RBP7.15□□□□□ -1.27
USP48-206ENST00000464577 MAN2B2Q9Y2E5 1009 aa7.15□□□□□ -1.27
USP48-206ENST00000464577 A0A096LPI6 279 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 ZBBXA8MT70 800 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 A8MU76 341 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 WNT9AO14904 365 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 MUSKO15146 869 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 RAD51BO15315 384 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 AIREO43918 545 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 PRAMEF11O60813 436 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 RAMP2O60895 175 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 WDR47O94967 919 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 PGRP06401 933 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 PRSS56P0CW18 603 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 SLC2A4P14672 509 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 SPNP16150 400 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 POLR2EP19388 210 aaKnown RBP7.14□□□□□ -1.27
USP48-206ENST00000464577 PAX3P23760 479 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 DNAJA1P31689 397 aaKnown RBP7.14□□□□□ -1.27
USP48-206ENST00000464577 KRT20P35900 424 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 NR4A2P43354 598 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 TRPC1P48995 793 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 CLK1P49759 484 aaKnown RBP7.14□□□□□ -1.27
USP48-206ENST00000464577 DAPP51397 102 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 CLCN4P51793 760 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 ARHGDIAP52565 204 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 YBEYP58557 167 aaPredicted RBP7.14□□□□□ -1.27
USP48-206ENST00000464577 DEFA1P59665 94 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 DEFA3P59666 94 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 RPL38P63173 70 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms