RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 ZNF75DP51815 510 aa5.36□□□□□ -1.55
PTCD3-205ENST00000464541 CDH13P55290 713 aa5.36□□□□□ -1.55
PTCD3-205ENST00000464541 CALD1Q05682 793 aaKnown RBP5.36□□□□□ -1.55
PTCD3-205ENST00000464541 GPR17Q13304 367 aa5.36□□□□□ -1.55
PTCD3-205ENST00000464541 BECN1Q14457 450 aa5.36□□□□□ -1.55
PTCD3-205ENST00000464541 BMP2KLQ5H9B9 411 aa5.36□□□□□ -1.55
PTCD3-205ENST00000464541 DCAF10Q5QP82 559 aa5.36□□□□□ -1.55
PTCD3-205ENST00000464541 NUDT13Q86X67 352 aa5.36□□□□□ -1.55
PTCD3-205ENST00000464541 DNAJC22Q8N4W6 341 aa5.36□□□□□ -1.55
PTCD3-205ENST00000464541 CFAP61Q8NHU2 1237 aa5.36□□□□□ -1.55
PTCD3-205ENST00000464541 FGFBP3Q8TAT2 258 aa5.36□□□□□ -1.55
PTCD3-205ENST00000464541 IRGQQ8WZA9 623 aa5.36□□□□□ -1.55
PTCD3-205ENST00000464541 WBP2Q969T9 261 aa5.36□□□□□ -1.55
PTCD3-205ENST00000464541 DHX58Q96C10 678 aa5.36□□□□□ -1.55
PTCD3-205ENST00000464541 SEPHS2Q99611 448 aa5.36□□□□□ -1.55
PTCD3-205ENST00000464541 CCDC106Q9BWC9 280 aa5.36□□□□□ -1.55
PTCD3-205ENST00000464541 ANKZF1Q9H8Y5 726 aa5.36□□□□□ -1.55
PTCD3-205ENST00000464541 PIH1D3Q9NQM4 214 aaKnown RBP5.36□□□□□ -1.55
PTCD3-205ENST00000464541 TUBE1Q9UJT0 475 aa5.36□□□□□ -1.55
PTCD3-205ENST00000464541 MTUS1Q9ULD2 1270 aa5.36□□□□□ -1.55
PTCD3-205ENST00000464541 MAGED1Q9Y5V3 778 aaPredicted RBP5.36□□□□□ -1.55
PTCD3-205ENST00000464541 FAM169AQ9Y6X4 670 aa5.36□□□□□ -1.55
PTCD3-205ENST00000464541 STK36Q9NRP7 1315 aa5.35□□□□□ -1.55
PTCD3-205ENST00000464541 ZG16O60844 167 aa5.35□□□□□ -1.55
PTCD3-205ENST00000464541 TOMM70O94826 608 aa5.35□□□□□ -1.55
PTCD3-205ENST00000464541 IGLV1-44P01699 117 aa5.35□□□□□ -1.55
PTCD3-205ENST00000464541 APOHP02749 345 aaPredicted RBP5.35□□□□□ -1.55
PTCD3-205ENST00000464541 CD48P09326 243 aa5.35□□□□□ -1.55
PTCD3-205ENST00000464541 CA4P22748 312 aa5.35□□□□□ -1.55
PTCD3-205ENST00000464541 TPD52P55327 224 aaPredicted RBP5.35□□□□□ -1.55
PTCD3-205ENST00000464541 ITGA9Q13797 1035 aa5.35□□□□□ -1.55
PTCD3-205ENST00000464541 ELFN2Q5R3F8 820 aa5.35□□□□□ -1.55
PTCD3-205ENST00000464541 FAM198BQ6UWH4 519 aa5.35□□□□□ -1.55
PTCD3-205ENST00000464541 CLEC4GQ6UXB4 293 aa5.35□□□□□ -1.55
PTCD3-205ENST00000464541 ZNF383Q8NA42 475 aa5.35□□□□□ -1.55
PTCD3-205ENST00000464541 OR13J1Q8NGT2 312 aa5.35□□□□□ -1.55
PTCD3-205ENST00000464541 ZFAND2BQ8WV99 257 aa5.35□□□□□ -1.55
PTCD3-205ENST00000464541 KLHL4Q9C0H6 718 aa5.35□□□□□ -1.55
PTCD3-205ENST00000464541 LAT2Q9GZY6 243 aa5.35□□□□□ -1.55
PTCD3-205ENST00000464541 OPA3Q9H6K4 179 aa5.35□□□□□ -1.55
PTCD3-205ENST00000464541 SCRT2Q9NQ03 307 aa5.35□□□□□ -1.55
PTCD3-205ENST00000464541 SERINC1Q9NRX5 453 aa5.35□□□□□ -1.55
PTCD3-205ENST00000464541 B3GAT1Q9P2W7 334 aa5.35□□□□□ -1.55
PTCD3-205ENST00000464541 SWAP70Q9UH65 585 aa5.35□□□□□ -1.55
PTCD3-205ENST00000464541 ZHX1Q9UKY1 873 aaPredicted RBP5.35□□□□□ -1.55
PTCD3-205ENST00000464541 FEZF1A0PJY2 475 aa5.34□□□□□ -1.55
PTCD3-205ENST00000464541 LDHCP07864 332 aa5.34□□□□□ -1.55
PTCD3-205ENST00000464541 WNT5AP41221 380 aa5.34□□□□□ -1.55
PTCD3-205ENST00000464541 HERV-K104P61576 105 aa5.34□□□□□ -1.55
PTCD3-205ENST00000464541 TEAD2Q15562 447 aa5.34□□□□□ -1.55
PTCD3-205ENST00000464541 KRT74Q7RTS7 529 aa5.34□□□□□ -1.55
PTCD3-205ENST00000464541 ZNF595Q8IYB9 648 aa5.34□□□□□ -1.55
PTCD3-205ENST00000464541 SPDL1Q96EA4 605 aa5.34□□□□□ -1.55
PTCD3-205ENST00000464541 SFXN2Q96NB2 322 aa5.34□□□□□ -1.55
PTCD3-205ENST00000464541 FNBP1Q96RU3 617 aa5.34□□□□□ -1.55
PTCD3-205ENST00000464541 TBC1D17Q9HA65 648 aa5.34□□□□□ -1.55
PTCD3-205ENST00000464541 SDR39U1Q9NRG7 319 aaPredicted RBP5.34□□□□□ -1.55
PTCD3-205ENST00000464541 LRWD1Q9UFC0 647 aa5.34□□□□□ -1.55
PTCD3-205ENST00000464541 TTLL3Q9Y4R7 772 aa5.34□□□□□ -1.55
PTCD3-205ENST00000464541 SMCHD1A6NHR9 2005 aa5.33□□□□□ -1.56
PTCD3-205ENST00000464541 IL11P20809 199 aa5.33□□□□□ -1.56
PTCD3-205ENST00000464541 ALDH4A1P30038 563 aa5.33□□□□□ -1.56
PTCD3-205ENST00000464541 SNTB1Q13884 538 aaKnown RBP5.33□□□□□ -1.56
PTCD3-205ENST00000464541 IL11RAQ14626 422 aa5.33□□□□□ -1.56
PTCD3-205ENST00000464541 P2RY6Q15077 328 aa5.33□□□□□ -1.56
PTCD3-205ENST00000464541 GTDC1Q4AE62 458 aa5.33□□□□□ -1.56
PTCD3-205ENST00000464541 NAA16Q6N069 864 aaPredicted RBP5.33□□□□□ -1.56
PTCD3-205ENST00000464541 NOTCH2NLQ7Z3S9 236 aa5.33□□□□□ -1.56
PTCD3-205ENST00000464541 CFAP206Q8IYR0 622 aa5.33□□□□□ -1.56
PTCD3-205ENST00000464541 MAML2Q8IZL2 1156 aaPredicted RBP5.33□□□□□ -1.56
PTCD3-205ENST00000464541 ARHGAP24Q8N264 748 aa5.33□□□□□ -1.56
PTCD3-205ENST00000464541 MARVELD2Q8N4S9 558 aa5.33□□□□□ -1.56
PTCD3-205ENST00000464541 POGLUT1Q8NBL1 392 aa5.33□□□□□ -1.56
PTCD3-205ENST00000464541 ADAD2Q8NCV1 583 aaKnown RBP5.33□□□□□ -1.56
PTCD3-205ENST00000464541 NPEPL1Q8NDH3 523 aa5.33□□□□□ -1.56
PTCD3-205ENST00000464541 SSMEM1Q8WWF3 244 aa5.33□□□□□ -1.56
PTCD3-205ENST00000464541 ZNF830Q96NB3 372 aaPredicted RBP5.33□□□□□ -1.56
PTCD3-205ENST00000464541 NOL11Q9H8H0 719 aaKnown RBP5.33□□□□□ -1.56
PTCD3-205ENST00000464541 A4GALTQ9NPC4 353 aa5.33□□□□□ -1.56
PTCD3-205ENST00000464541 FGF21Q9NSA1 209 aa5.33□□□□□ -1.56
PTCD3-205ENST00000464541 HAO2Q9NYQ3 351 aa5.33□□□□□ -1.56
PTCD3-205ENST00000464541 TRIM17Q9Y577 477 aa5.33□□□□□ -1.56
PTCD3-205ENST00000464541 DISP3Q9P2K9 1392 aa5.32□□□□□ -1.56
PTCD3-205ENST00000464541 KLF11O14901 512 aa5.32□□□□□ -1.56
PTCD3-205ENST00000464541 AP2A2O94973 939 aa5.32□□□□□ -1.56
PTCD3-205ENST00000464541 TRUB2O95900 331 aaKnown RBP5.32□□□□□ -1.56
PTCD3-205ENST00000464541 CEACAM1P13688 526 aa5.32□□□□□ -1.56
PTCD3-205ENST00000464541 AKR1B1P15121 316 aa5.32□□□□□ -1.56
PTCD3-205ENST00000464541 DNASE1P24855 282 aa5.32□□□□□ -1.56
PTCD3-205ENST00000464541 MAP2K2P36507 400 aa5.32□□□□□ -1.56
PTCD3-205ENST00000464541 RAD52P43351 418 aa5.32□□□□□ -1.56
PTCD3-205ENST00000464541 CCR3P51677 355 aa5.32□□□□□ -1.56
PTCD3-205ENST00000464541 MAT1AQ00266 395 aaKnown RBP5.32□□□□□ -1.56
PTCD3-205ENST00000464541 DMPKQ09013 629 aa5.32□□□□□ -1.56
PTCD3-205ENST00000464541 ALCAMQ13740 583 aa5.32□□□□□ -1.56
PTCD3-205ENST00000464541 TUBB2AQ13885 445 aa5.32□□□□□ -1.56
PTCD3-205ENST00000464541 PDLIM3Q53GG5 364 aaPredicted RBP5.32□□□□□ -1.56
PTCD3-205ENST00000464541 C9orf152Q5JTZ5 239 aa5.32□□□□□ -1.56
PTCD3-205ENST00000464541 SLC16A9Q7RTY1 509 aa5.32□□□□□ -1.56
PTCD3-205ENST00000464541 CAMKMTQ7Z624 323 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms