RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 WDR70Q9NW82 654 aa16.56■□□□□ 0.24
VPS52-215ENST00000464425 FOXJ2Q9P0K8 574 aa16.56■□□□□ 0.24
VPS52-215ENST00000464425 CDYLQ9Y232 598 aa16.56■□□□□ 0.24
VPS52-215ENST00000464425 TDRKHQ9Y2W6 561 aaKnown RBP16.56■□□□□ 0.24
VPS52-215ENST00000464425 A0A087WV48 116 aa16.55■□□□□ 0.24
VPS52-215ENST00000464425 NVLO15381 856 aaKnown RBP16.55■□□□□ 0.24
VPS52-215ENST00000464425 SLCO2B1O94956 709 aa16.55■□□□□ 0.24
VPS52-215ENST00000464425 ESR1P03372 595 aa16.55■□□□□ 0.24
VPS52-215ENST00000464425 ANKRD34CP0C6C1 535 aa16.55■□□□□ 0.24
VPS52-215ENST00000464425 PKMP14618 531 aaKnown RBP16.55■□□□□ 0.24
VPS52-215ENST00000464425 MPP1Q00013 466 aa16.55■□□□□ 0.24
VPS52-215ENST00000464425 MGAT5Q09328 741 aa16.55■□□□□ 0.24
VPS52-215ENST00000464425 TEDDM1Q5T9Z0 273 aa16.55■□□□□ 0.24
VPS52-215ENST00000464425 TRMT10BQ6PF06 316 aaKnown RBP16.55■□□□□ 0.24
VPS52-215ENST00000464425 KIAA0408Q6ZU52 694 aa16.55■□□□□ 0.24
VPS52-215ENST00000464425 GALNT7Q86SF2 657 aa16.55■□□□□ 0.24
VPS52-215ENST00000464425 BMPERQ8N8U9 685 aa16.55■□□□□ 0.24
VPS52-215ENST00000464425 KCNE4Q8WWG9 221 aa16.55■□□□□ 0.24
VPS52-215ENST00000464425 CTRCQ99895 268 aa16.55■□□□□ 0.24
VPS52-215ENST00000464425 TFB2MQ9H5Q4 396 aaKnown RBP16.55■□□□□ 0.24
VPS52-215ENST00000464425 PPANQ9NQ55 473 aaKnown RBP16.55■□□□□ 0.24
VPS52-215ENST00000464425 GALPQ9UBC7 116 aa16.55■□□□□ 0.24
VPS52-215ENST00000464425 TSR3Q9UJK0 312 aaKnown RBP16.55■□□□□ 0.24
VPS52-215ENST00000464425 FBXO5Q9UKT4 447 aa16.55■□□□□ 0.24
VPS52-215ENST00000464425 PLAGL1Q9UM63 463 aa16.55■□□□□ 0.24
VPS52-215ENST00000464425 B3GALT1Q9Y5Z6 326 aa16.55■□□□□ 0.24
VPS52-215ENST00000464425 LAMA5O15230 3695 aa16.55■□□□□ 0.24
VPS52-215ENST00000464425 IGHV5-51A0A0C4DH38 117 aa16.54■□□□□ 0.24
VPS52-215ENST00000464425 TCRBV9S1A1TA0A576 114 aa16.54■□□□□ 0.24
VPS52-215ENST00000464425 B4E171 279 aa16.54■□□□□ 0.24
VPS52-215ENST00000464425 H3BMM5 538 aa16.54■□□□□ 0.24
VPS52-215ENST00000464425 BTN3A3O00478 584 aa16.54■□□□□ 0.24
VPS52-215ENST00000464425 KPNA5O15131 536 aa16.54■□□□□ 0.24
VPS52-215ENST00000464425 TOX3O15405 576 aaPredicted RBP16.54■□□□□ 0.24
VPS52-215ENST00000464425 KRT37O76014 449 aa16.54■□□□□ 0.24
VPS52-215ENST00000464425 HAUS5O94927 633 aa16.54■□□□□ 0.24
VPS52-215ENST00000464425 TSPAN7P41732 249 aa16.54■□□□□ 0.24
VPS52-215ENST00000464425 MC2RQ01718 297 aa16.54■□□□□ 0.24
VPS52-215ENST00000464425 PRKAA1Q13131 559 aa16.54■□□□□ 0.24
VPS52-215ENST00000464425 KYNUQ16719 465 aa16.54■□□□□ 0.24
VPS52-215ENST00000464425 ANKS6Q68DC2 871 aa16.54■□□□□ 0.24
VPS52-215ENST00000464425 FBXO38Q6PIJ6 1188 aa16.54■□□□□ 0.24
VPS52-215ENST00000464425 PRSS42Q7Z5A4 293 aa16.54■□□□□ 0.24
VPS52-215ENST00000464425 AMIGO1Q86WK6 493 aa16.54■□□□□ 0.24
VPS52-215ENST00000464425 ZFAND4Q86XD8 727 aa16.54■□□□□ 0.24
VPS52-215ENST00000464425 SPACA3Q8IXA5 215 aa16.54■□□□□ 0.24
VPS52-215ENST00000464425 TBC1D21Q8IYX1 336 aa16.54■□□□□ 0.24
VPS52-215ENST00000464425 C2CD4AQ8NCU7 369 aaPredicted RBP16.54■□□□□ 0.24
VPS52-215ENST00000464425 OR5K2Q8NHB8 316 aa16.54■□□□□ 0.24
VPS52-215ENST00000464425 SKA2Q8WVK7 121 aaPredicted RBP16.54■□□□□ 0.24
VPS52-215ENST00000464425 PPM1MQ96MI6 270 aa16.54■□□□□ 0.24
VPS52-215ENST00000464425 MAP3K3Q99759 626 aa16.54■□□□□ 0.24
VPS52-215ENST00000464425 TXLNGYQ9BZA5 131 aa16.54■□□□□ 0.24
VPS52-215ENST00000464425 ZNF768Q9H5H4 540 aaKnown RBP16.54■□□□□ 0.24
VPS52-215ENST00000464425 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.54■□□□□ 0.24
VPS52-215ENST00000464425 CIDEBQ9UHD4 219 aa16.54■□□□□ 0.24
VPS52-215ENST00000464425 V9GYY5 206 aaPredicted RBP16.54■□□□□ 0.24
VPS52-215ENST00000464425 AHCTF1Q8WYP5 2266 aa16.53■□□□□ 0.24
VPS52-215ENST00000464425 PKD1L2Q7Z442 2459 aa16.53■□□□□ 0.24
VPS52-215ENST00000464425 GSAPA4D1B5 854 aa16.53■□□□□ 0.24
VPS52-215ENST00000464425 E5RI56 91 aa16.53■□□□□ 0.24
VPS52-215ENST00000464425 KLK10O43240 276 aa16.53■□□□□ 0.24
VPS52-215ENST00000464425 FAM153BP0C7A2 387 aa16.53■□□□□ 0.24
VPS52-215ENST00000464425 TPBGLP0DKB5 382 aa16.53■□□□□ 0.24
VPS52-215ENST00000464425 MYBL2P10244 700 aa16.53■□□□□ 0.24
VPS52-215ENST00000464425 PHBP35232 272 aa16.53■□□□□ 0.24
VPS52-215ENST00000464425 KPNA2P52292 529 aaKnown RBP16.53■□□□□ 0.24
VPS52-215ENST00000464425 VSNL1P62760 191 aa16.53■□□□□ 0.24
VPS52-215ENST00000464425 SH3BP2P78314 561 aa16.53■□□□□ 0.24
VPS52-215ENST00000464425 FOXM1Q08050 763 aa16.53■□□□□ 0.24
VPS52-215ENST00000464425 FAM153CQ494X1 144 aa16.53■□□□□ 0.24
VPS52-215ENST00000464425 DCAF12Q5T6F0 453 aa16.53■□□□□ 0.24
VPS52-215ENST00000464425 ZNF549Q6P9A3 640 aa16.53■□□□□ 0.24
VPS52-215ENST00000464425 CNSTQ6PJW8 725 aa16.53■□□□□ 0.24
VPS52-215ENST00000464425 TRMT10CQ7L0Y3 403 aaKnown RBP16.53■□□□□ 0.24
VPS52-215ENST00000464425 SPNS2Q8IVW8 549 aa16.53■□□□□ 0.24
VPS52-215ENST00000464425 KLHL6Q8WZ60 621 aa16.53■□□□□ 0.24
VPS52-215ENST00000464425 FUT8Q9BYC5 575 aa16.53■□□□□ 0.24
VPS52-215ENST00000464425 PARD6BQ9BYG5 372 aa16.53■□□□□ 0.24
VPS52-215ENST00000464425 CCDC68Q9H2F9 335 aa16.53■□□□□ 0.24
VPS52-215ENST00000464425 CDC42EP4Q9H3Q1 356 aaKnown RBP16.53■□□□□ 0.24
VPS52-215ENST00000464425 APMAPQ9HDC9 416 aa16.53■□□□□ 0.24
VPS52-215ENST00000464425 NSMCE4AQ9NXX6 385 aa16.53■□□□□ 0.24
VPS52-215ENST00000464425 NINJ2Q9NZG7 142 aa16.53■□□□□ 0.24
VPS52-215ENST00000464425 ZFATQ9P243 1243 aa16.53■□□□□ 0.24
VPS52-215ENST00000464425 POLG2Q9UHN1 485 aa16.53■□□□□ 0.24
VPS52-215ENST00000464425 RAB21Q9UL25 225 aa16.53■□□□□ 0.24
VPS52-215ENST00000464425 ICKQ9UPZ9 632 aa16.53■□□□□ 0.24
VPS52-215ENST00000464425 RUVBL2Q9Y230 463 aaKnown RBP16.53■□□□□ 0.24
VPS52-215ENST00000464425 FAM159BA6NKW6 160 aa16.52■□□□□ 0.24
VPS52-215ENST00000464425 BTN3A1O00481 513 aa16.52■□□□□ 0.24
VPS52-215ENST00000464425 STX2P32856 288 aa16.52■□□□□ 0.24
VPS52-215ENST00000464425 ILF2Q12905 390 aaKnown RBP16.52■□□□□ 0.24
VPS52-215ENST00000464425 KCNAB1Q14722 419 aa16.52■□□□□ 0.24
VPS52-215ENST00000464425 TGIF1Q15583 401 aa16.52■□□□□ 0.24
VPS52-215ENST00000464425 COL28A1Q2UY09 1125 aa16.52■□□□□ 0.24
VPS52-215ENST00000464425 PLEKHS1Q5SXH7 462 aa16.52■□□□□ 0.24
VPS52-215ENST00000464425 CAPN12Q6ZSI9 719 aa16.52■□□□□ 0.24
VPS52-215ENST00000464425 SLC26A11Q86WA9 606 aa16.52■□□□□ 0.24
VPS52-215ENST00000464425 ADGRF3Q8IZF5 1079 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms