RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 LRRC38Q5VT99 294 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 ZCCHC8Q6NZY4 707 aaKnown RBP5.3□□□□□ -1.56
CD46-211ENST00000464082 PNCKQ6P2M8 343 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 MFSD7Q6UXD7 560 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 B4GALNT4Q76KP1 1039 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 TECPR1Q7Z6L1 1165 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 VSIG1Q86XK7 387 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 LRRC49Q8IUZ0 686 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 TMEM139Q8IV31 216 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 CNGA4Q8IV77 575 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 GALNT15Q8N3T1 639 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 C9orf106Q8NAJ2 232 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 CCL4L1Q8NHW4 92 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 LMX1AQ8TE12 382 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 OR1E3Q8WZA6 343 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 LINC00476Q8WZB0 136 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 CAVIN3Q969G5 261 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 DTD2Q96FN9 168 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 SCRN2Q96FV2 425 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 PRR11Q96HE9 360 aaPredicted RBP5.3□□□□□ -1.56
CD46-211ENST00000464082 WDR92Q96MX6 357 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 TRIB3Q96RU7 358 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 LGMNQ99538 433 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 SEMA3CQ99985 751 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 SPATA5L1Q9BVQ7 753 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 TDRD1Q9BXT4 1180 aaKnown RBP5.3□□□□□ -1.56
CD46-211ENST00000464082 BRD8Q9H0E9 1235 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 APOBEC3BQ9UH17 382 aaKnown RBP5.3□□□□□ -1.56
CD46-211ENST00000464082 INTUQ9ULD6 942 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 PHTF1Q9UMS5 762 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 PCDHB1Q9Y5F3 818 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 RAI2Q9Y5P3 530 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 DGKBQ9Y6T7 804 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 ANKRD12Q6UB98 2062 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 PCM1Q15154 2024 aa5.3□□□□□ -1.56
CD46-211ENST00000464082 BSNQ9UPA5 3926 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 LRRD1A4D1F6 860 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 KCNK1O00180 336 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 PSMD11O00231 422 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 NTN3O00634 580 aaPredicted RBP5.29□□□□□ -1.56
CD46-211ENST00000464082 NCR1O76036 304 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 MT-CO3P00414 261 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 TPM3P06753 285 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 GP1BAP07359 652 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 KRT7P08729 469 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 CCNB1P14635 433 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 PECAM1P16284 738 aaPredicted RBP5.29□□□□□ -1.56
CD46-211ENST00000464082 CXCR5P32302 372 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 HNF1BP35680 557 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 CDKN2BP42772 138 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 SSR1P43307 286 aaKnown RBP5.29□□□□□ -1.56
CD46-211ENST00000464082 ZNF75DP51815 510 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 STC1P52823 247 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 SRP54P61011 504 aaKnown RBP5.29□□□□□ -1.56
CD46-211ENST00000464082 IFI35P80217 286 aaPredicted RBP5.29□□□□□ -1.56
CD46-211ENST00000464082 PPARDQ03181 441 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 WASHC5Q12768 1159 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 PTK2BQ14289 1009 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 TCEA2Q15560 299 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 ARMC12Q5T9G4 340 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 FOXB2Q5VYV0 432 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 LRRC66Q68CR7 880 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 ERAP2Q6P179 960 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 CRTC1Q6UUV9 634 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 ENPP7Q6UWV6 458 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 RAD9BQ6WBX8 426 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 Q6ZVL8 140 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 C17orf82Q86X59 251 aaPredicted RBP5.29□□□□□ -1.56
CD46-211ENST00000464082 NRROSQ86YC3 692 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 RHOT2Q8IXI1 618 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 CCDC13Q8IYE1 715 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 KCTD6Q8NC69 237 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 GPR156Q8NFN8 814 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 IFI44Q8TCB0 444 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 PDCD6IPQ8WUM4 868 aaKnown RBP5.29□□□□□ -1.56
CD46-211ENST00000464082 KRT35Q92764 455 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 NUS1Q96E22 293 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 COX14Q96I36 57 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 CCDC42Q96M95 316 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 LYSMD1Q96S90 227 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 CPPED1Q9BRF8 314 aaPredicted RBP5.29□□□□□ -1.56
CD46-211ENST00000464082 C1QTNF7Q9BXJ2 289 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 TEX101Q9BY14 249 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 KRTAP1-5Q9BYS1 174 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 FRMD8Q9BZ67 464 aaPredicted RBP5.29□□□□□ -1.56
CD46-211ENST00000464082 ABCG8Q9H221 673 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 RBM22Q9NW64 420 aaKnown RBP eCLIP5.29□□□□□ -1.56
CD46-211ENST00000464082 SPASTQ9UBP0 616 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 AMACRQ9UHK6 382 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 CLCA2Q9UQC9 943 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 CHKBQ9Y259 395 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 ALG6Q9Y672 507 aa5.29□□□□□ -1.56
CD46-211ENST00000464082 HEATR5BQ9P2D3 2071 aa5.28□□□□□ -1.56
CD46-211ENST00000464082 MED13Q9UHV7 2174 aa5.28□□□□□ -1.56
CD46-211ENST00000464082 hCG_1818297A0A087WSY0 165 aa5.28□□□□□ -1.56
CD46-211ENST00000464082 A0A087WV48 116 aa5.28□□□□□ -1.56
CD46-211ENST00000464082 A0A1W2PQ67 120 aa5.28□□□□□ -1.56
CD46-211ENST00000464082 A0A1W2PQM1 296 aa5.28□□□□□ -1.56
CD46-211ENST00000464082 PRSS38A1L453 326 aa5.28□□□□□ -1.56
CD46-211ENST00000464082 NEMP2A6NFY4 417 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms