RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	TBX2	Q13207	712 aa	Predicted RBP	10.77	□□□□□ -0.69
PTPN7-204	ENST00000462815	PRKG2	Q13237	762 aa		10.77	□□□□□ -0.69
PTPN7-204	ENST00000462815	GPR33	Q49SQ1	333 aa		10.77	□□□□□ -0.69
PTPN7-204	ENST00000462815	ZRANB3	Q5FWF4	1079 aa		10.77	□□□□□ -0.69
PTPN7-204	ENST00000462815	ANKRD20A2	Q5SQ80	823 aa		10.77	□□□□□ -0.69
PTPN7-204	ENST00000462815	ANKRD20A1	Q5TYW2	823 aa		10.77	□□□□□ -0.69
PTPN7-204	ENST00000462815	C1orf189	Q5VU69	101 aa		10.77	□□□□□ -0.69
PTPN7-204	ENST00000462815	ANKRD20A3	Q5VUR7	823 aa		10.77	□□□□□ -0.69
PTPN7-204	ENST00000462815	C11orf63	Q6NUN7	778 aa		10.77	□□□□□ -0.69
PTPN7-204	ENST00000462815	SARM1	Q6SZW1	724 aa		10.77	□□□□□ -0.69
PTPN7-204	ENST00000462815	IGFL2	Q6UWQ7	119 aa		10.77	□□□□□ -0.69
PTPN7-204	ENST00000462815	UNC5A	Q6ZN44	842 aa		10.77	□□□□□ -0.69
PTPN7-204	ENST00000462815	SERPINA9	Q86WD7	417 aa		10.77	□□□□□ -0.69
PTPN7-204	ENST00000462815	RCOR2	Q8IZ40	523 aa		10.77	□□□□□ -0.69
PTPN7-204	ENST00000462815	DNAJC22	Q8N4W6	341 aa		10.77	□□□□□ -0.69
PTPN7-204	ENST00000462815	CLDN19	Q8N6F1	224 aa		10.77	□□□□□ -0.69
PTPN7-204	ENST00000462815	OR5AR1	Q8NGP9	310 aa		10.77	□□□□□ -0.69
PTPN7-204	ENST00000462815	ACTL9	Q8TC94	416 aa		10.77	□□□□□ -0.69
PTPN7-204	ENST00000462815	PROKR1	Q8TCW9	393 aa		10.77	□□□□□ -0.69
PTPN7-204	ENST00000462815	TFG	Q92734	400 aa	Predicted RBP	10.77	□□□□□ -0.69
PTPN7-204	ENST00000462815	DCUN1D1	Q96GG9	259 aa		10.77	□□□□□ -0.69
PTPN7-204	ENST00000462815	DNAJC1	Q96KC8	554 aa	Known RBP	10.77	□□□□□ -0.69
PTPN7-204	ENST00000462815	IP6K3	Q96PC2	410 aa		10.77	□□□□□ -0.69
PTPN7-204	ENST00000462815	MENT	Q9BUN1	341 aa		10.77	□□□□□ -0.69
PTPN7-204	ENST00000462815	HEMGN	Q9BXL5	484 aa		10.77	□□□□□ -0.69
PTPN7-204	ENST00000462815	ENAM	Q9NRM1	1142 aa		10.77	□□□□□ -0.69
PTPN7-204	ENST00000462815	P4HTM	Q9NXG6	502 aa		10.77	□□□□□ -0.69
PTPN7-204	ENST00000462815	DHCR7	Q9UBM7	475 aa	Known RBP	10.77	□□□□□ -0.69
PTPN7-204	ENST00000462815	CDYL	Q9Y232	598 aa		10.77	□□□□□ -0.69
PTPN7-204	ENST00000462815	SLC5A6	Q9Y289	635 aa		10.77	□□□□□ -0.69
PTPN7-204	ENST00000462815	PADI2	Q9Y2J8	665 aa		10.77	□□□□□ -0.69
PTPN7-204	ENST00000462815	PRSS21	Q9Y6M0	314 aa		10.77	□□□□□ -0.69
PTPN7-204	ENST00000462815	PIKFYVE	Q9Y2I7	2098 aa		10.77	□□□□□ -0.69
PTPN7-204	ENST00000462815	ANKRD17	O75179	2603 aa	Known RBP	10.76	□□□□□ -0.69
PTPN7-204	ENST00000462815	SEC16A	O15027	2179 aa		10.76	□□□□□ -0.69
PTPN7-204	ENST00000462815	POLE	Q07864	2286 aa		10.76	□□□□□ -0.69
PTPN7-204	ENST00000462815	CCDC88C	Q9P219	2028 aa		10.76	□□□□□ -0.69
PTPN7-204	ENST00000462815	BHMG1	C9JSJ3	638 aa	Predicted RBP	10.76	□□□□□ -0.69
PTPN7-204	ENST00000462815	PJA2	O43164	708 aa		10.76	□□□□□ -0.69
PTPN7-204	ENST00000462815	OR2B3	O76000	313 aa		10.76	□□□□□ -0.69
PTPN7-204	ENST00000462815	CRTAM	O95727	393 aa		10.76	□□□□□ -0.69
PTPN7-204	ENST00000462815	ONECUT2	O95948	504 aa		10.76	□□□□□ -0.69
PTPN7-204	ENST00000462815	CHRM5	P08912	532 aa	Predicted RBP	10.76	□□□□□ -0.69
PTPN7-204	ENST00000462815	RALB	P11234	206 aa		10.76	□□□□□ -0.69
PTPN7-204	ENST00000462815	ITGAL	P20701	1170 aa		10.76	□□□□□ -0.69
PTPN7-204	ENST00000462815	AGXT	P21549	392 aa		10.76	□□□□□ -0.69
PTPN7-204	ENST00000462815	PTPN7	P35236	360 aa		10.76	□□□□□ -0.69
PTPN7-204	ENST00000462815	TNNT3	P45378	269 aa	Predicted RBP	10.76	□□□□□ -0.69
PTPN7-204	ENST00000462815	OTUD4	Q01804	1114 aa	Known RBP	10.76	□□□□□ -0.69
PTPN7-204	ENST00000462815	SPARCL1	Q14515	664 aa		10.76	□□□□□ -0.69
PTPN7-204	ENST00000462815	KRT33B	Q14525	404 aa		10.76	□□□□□ -0.69
PTPN7-204	ENST00000462815	DBN1	Q16643	649 aa		10.76	□□□□□ -0.69
PTPN7-204	ENST00000462815	ODF2	Q5BJF6	829 aa		10.76	□□□□□ -0.69
PTPN7-204	ENST00000462815	C1QL3	Q5VWW1	255 aa		10.76	□□□□□ -0.69
PTPN7-204	ENST00000462815	ITPRIPL1	Q6GPH6	555 aa		10.76	□□□□□ -0.69
PTPN7-204	ENST00000462815	RNF214	Q8ND24	703 aa		10.76	□□□□□ -0.69
PTPN7-204	ENST00000462815	CCDC110	Q8TBZ0	833 aa		10.76	□□□□□ -0.69
PTPN7-204	ENST00000462815	HEXDC	Q8WVB3	486 aa		10.76	□□□□□ -0.69
PTPN7-204	ENST00000462815	FER1L6-AS2	Q96M78	137 aa		10.76	□□□□□ -0.69
PTPN7-204	ENST00000462815	SPATA13	Q96N96	652 aa		10.76	□□□□□ -0.69
PTPN7-204	ENST00000462815	FAM118B	Q9BPY3	351 aa		10.76	□□□□□ -0.69
PTPN7-204	ENST00000462815	TBL1Y	Q9BQ87	522 aa		10.76	□□□□□ -0.69
PTPN7-204	ENST00000462815	NLE1	Q9NVX2	485 aa	Predicted RBP	10.76	□□□□□ -0.69
PTPN7-204	ENST00000462815	G3BP2	Q9UN86	482 aa	Known RBP	10.76	□□□□□ -0.69
PTPN7-204	ENST00000462815	EFR3B	Q9Y2G0	817 aa		10.76	□□□□□ -0.69
PTPN7-204	ENST00000462815	AAR2	Q9Y312	384 aa	Known RBP	10.76	□□□□□ -0.69
PTPN7-204	ENST00000462815	PTRH2	Q9Y3E5	179 aa	Known RBP	10.76	□□□□□ -0.69
PTPN7-204	ENST00000462815	AP1M2	Q9Y6Q5	423 aa		10.76	□□□□□ -0.69
PTPN7-204	ENST00000462815	SNRNP200	O75643	2136 aa	Known RBP	10.76	□□□□□ -0.69
PTPN7-204	ENST00000462815		A0A0J9YY10	115 aa		10.75	□□□□□ -0.69
PTPN7-204	ENST00000462815	SLC5A10	A0PJK1	596 aa		10.75	□□□□□ -0.69
PTPN7-204	ENST00000462815	ANKUB1	A6NFN9	424 aa		10.75	□□□□□ -0.69
PTPN7-204	ENST00000462815	CFAP99	D6REC4	459 aa		10.75	□□□□□ -0.69
PTPN7-204	ENST00000462815		H7C0C1	242 aa		10.75	□□□□□ -0.69
PTPN7-204	ENST00000462815	IFRD1	O00458	451 aa	Predicted RBP	10.75	□□□□□ -0.69
PTPN7-204	ENST00000462815	ZSCAN9	O15535	394 aa	Predicted RBP	10.75	□□□□□ -0.69
PTPN7-204	ENST00000462815	GSTM1	P09488	218 aa		10.75	□□□□□ -0.69
PTPN7-204	ENST00000462815	CTNNA1	P35221	906 aa	Known RBP	10.75	□□□□□ -0.69
PTPN7-204	ENST00000462815	FOLR3	P41439	243 aa		10.75	□□□□□ -0.69
PTPN7-204	ENST00000462815	ATP5O	P48047	213 aa		10.75	□□□□□ -0.69
PTPN7-204	ENST00000462815	DCD	P81605	110 aa	Known RBP	10.75	□□□□□ -0.69
PTPN7-204	ENST00000462815	GSTM4	Q03013	218 aa		10.75	□□□□□ -0.69
PTPN7-204	ENST00000462815	SLC9A5	Q14940	896 aa		10.75	□□□□□ -0.69
PTPN7-204	ENST00000462815	NKAIN1	Q4KMZ8	207 aa		10.75	□□□□□ -0.69
PTPN7-204	ENST00000462815	MLIP	Q5VWP3	458 aa		10.75	□□□□□ -0.69
PTPN7-204	ENST00000462815	PACS1	Q6VY07	963 aa		10.75	□□□□□ -0.69
PTPN7-204	ENST00000462815	COX15	Q7KZN9	410 aa		10.75	□□□□□ -0.69
PTPN7-204	ENST00000462815	LINC01555	Q8NAE3	123 aa		10.75	□□□□□ -0.69
PTPN7-204	ENST00000462815	ST6GALNAC3	Q8NDV1	305 aa		10.75	□□□□□ -0.69
PTPN7-204	ENST00000462815	UBE2Q2	Q8WVN8	375 aa		10.75	□□□□□ -0.69
PTPN7-204	ENST00000462815	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	10.75	□□□□□ -0.69
PTPN7-204	ENST00000462815	SPSB2	Q99619	263 aa		10.75	□□□□□ -0.69
PTPN7-204	ENST00000462815	C17orf62	Q9BQA9	187 aa		10.75	□□□□□ -0.69
PTPN7-204	ENST00000462815	ZNHIT6	Q9NWK9	470 aa	Known RBP	10.75	□□□□□ -0.69
PTPN7-204	ENST00000462815	MROH6	A6NGR9	719 aa		10.74	□□□□□ -0.69
PTPN7-204	ENST00000462815	AGPS	O00116	658 aa		10.74	□□□□□ -0.69
PTPN7-204	ENST00000462815	SOCS6	O14544	535 aa		10.74	□□□□□ -0.69
PTPN7-204	ENST00000462815	LIN7A	O14910	233 aa	Predicted RBP	10.74	□□□□□ -0.69
PTPN7-204	ENST00000462815	KCNN4	O15554	427 aa		10.74	□□□□□ -0.69
PTPN7-204	ENST00000462815	AP2A2	O94973	939 aa		10.74	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms