RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 SSPNQ14714 243 aa14.88□□□□□ -0.03
SKA3-204ENST00000462482 DBN1Q16643 649 aa14.88□□□□□ -0.03
SKA3-204ENST00000462482 ZNF789Q5FWF6 425 aa14.88□□□□□ -0.03
SKA3-204ENST00000462482 VWA5B1Q5TIE3 1220 aa14.88□□□□□ -0.03
SKA3-204ENST00000462482 FAM69BQ5VUD6 431 aa14.88□□□□□ -0.03
SKA3-204ENST00000462482 LYPLAL1Q5VWZ2 237 aa14.88□□□□□ -0.03
SKA3-204ENST00000462482 SLC6A19Q695T7 634 aa14.88□□□□□ -0.03
SKA3-204ENST00000462482 LINC00523Q86TU6 105 aa14.88□□□□□ -0.03
SKA3-204ENST00000462482 IQCKQ8N0W5 287 aa14.88□□□□□ -0.03
SKA3-204ENST00000462482 FAM71DQ8N9W8 422 aa14.88□□□□□ -0.03
SKA3-204ENST00000462482 PROKR1Q8TCW9 393 aa14.88□□□□□ -0.03
SKA3-204ENST00000462482 TM9SF4Q92544 642 aa14.88□□□□□ -0.03
SKA3-204ENST00000462482 CDKN2AIPNLQ96HQ2 116 aa14.88□□□□□ -0.03
SKA3-204ENST00000462482 AP1M1Q9BXS5 423 aa14.88□□□□□ -0.03
SKA3-204ENST00000462482 OR6C2Q9NZP2 312 aa14.88□□□□□ -0.03
SKA3-204ENST00000462482 LUZP4Q9P127 313 aa14.88□□□□□ -0.03
SKA3-204ENST00000462482 PTRH2Q9Y3E5 179 aaKnown RBP14.88□□□□□ -0.03
SKA3-204ENST00000462482 A0A0J9YY10 115 aa14.87□□□□□ -0.03
SKA3-204ENST00000462482 ISM1B1AKI9 464 aa14.87□□□□□ -0.03
SKA3-204ENST00000462482 ZSCAN9O15535 394 aaPredicted RBP14.87□□□□□ -0.03
SKA3-204ENST00000462482 IPO13O94829 963 aaKnown RBP14.87□□□□□ -0.03
SKA3-204ENST00000462482 CHRM5P08912 532 aaPredicted RBP14.87□□□□□ -0.03
SKA3-204ENST00000462482 MSNP26038 577 aaKnown RBP14.87□□□□□ -0.03
SKA3-204ENST00000462482 PPARGP37231 505 aaPredicted RBP14.87□□□□□ -0.03
SKA3-204ENST00000462482 RAPSNQ13702 412 aa14.87□□□□□ -0.03
SKA3-204ENST00000462482 BRD3Q15059 726 aa14.87□□□□□ -0.03
SKA3-204ENST00000462482 C1orf189Q5VU69 101 aa14.87□□□□□ -0.03
SKA3-204ENST00000462482 RHBDD2Q6NTF9 364 aa14.87□□□□□ -0.03
SKA3-204ENST00000462482 TLDC1Q6P9B6 456 aa14.87□□□□□ -0.03
SKA3-204ENST00000462482 UNC5AQ6ZN44 842 aa14.87□□□□□ -0.03
SKA3-204ENST00000462482 MRGPREQ86SM8 312 aa14.87□□□□□ -0.03
SKA3-204ENST00000462482 TRIM73Q86UV7 250 aa14.87□□□□□ -0.03
SKA3-204ENST00000462482 TXLNBQ8N3L3 684 aa14.87□□□□□ -0.03
SKA3-204ENST00000462482 DNAAF3Q8N9W5 541 aa14.87□□□□□ -0.03
SKA3-204ENST00000462482 OR5AR1Q8NGP9 310 aa14.87□□□□□ -0.03
SKA3-204ENST00000462482 PANX2Q96RD6 677 aa14.87□□□□□ -0.03
SKA3-204ENST00000462482 SMAD5Q99717 465 aaKnown RBP14.87□□□□□ -0.03
SKA3-204ENST00000462482 NDC1Q9BTX1 674 aa14.87□□□□□ -0.03
SKA3-204ENST00000462482 TSSK1BQ9BXA7 367 aa14.87□□□□□ -0.03
SKA3-204ENST00000462482 CASS4Q9NQ75 786 aa14.87□□□□□ -0.03
SKA3-204ENST00000462482 AMFRQ9UKV5 643 aa14.87□□□□□ -0.03
SKA3-204ENST00000462482 ICKQ9UPZ9 632 aa14.87□□□□□ -0.03
SKA3-204ENST00000462482 BTNL10A8MVZ5 291 aa14.86□□□□□ -0.03
SKA3-204ENST00000462482 AP2A1O95782 977 aa14.86□□□□□ -0.03
SKA3-204ENST00000462482 DDAH2O95865 285 aa14.86□□□□□ -0.03
SKA3-204ENST00000462482 PRSS56P0CW18 603 aa14.86□□□□□ -0.03
SKA3-204ENST00000462482 KIR2DS3Q14952 304 aa14.86□□□□□ -0.03
SKA3-204ENST00000462482 CYP2A13Q16696 494 aa14.86□□□□□ -0.03
SKA3-204ENST00000462482 DEFB110Q30KQ9 67 aa14.86□□□□□ -0.03
SKA3-204ENST00000462482 ZNF658BQ4V348 819 aaPredicted RBP14.86□□□□□ -0.03
SKA3-204ENST00000462482 KCTD11Q693B1 232 aa14.86□□□□□ -0.03
SKA3-204ENST00000462482 PEX26Q7Z412 305 aa14.86□□□□□ -0.03
SKA3-204ENST00000462482 KIAA1328Q86T90 577 aa14.86□□□□□ -0.03
SKA3-204ENST00000462482 KLHDC8BQ8IXV7 354 aa14.86□□□□□ -0.03
SKA3-204ENST00000462482 PIANPQ8IYJ0 282 aa14.86□□□□□ -0.03
SKA3-204ENST00000462482 SYCE1Q8N0S2 351 aa14.86□□□□□ -0.03
SKA3-204ENST00000462482 DENND1AQ8TEH3 1009 aa14.86□□□□□ -0.03
SKA3-204ENST00000462482 DLG3Q92796 817 aa14.86□□□□□ -0.03
SKA3-204ENST00000462482 CHRNA10Q9GZZ6 450 aa14.86□□□□□ -0.03
SKA3-204ENST00000462482 ILKAPQ9H0C8 392 aaPredicted RBP14.86□□□□□ -0.03
SKA3-204ENST00000462482 PLCL2Q9UPR0 1127 aa14.86□□□□□ -0.03
SKA3-204ENST00000462482 NBASA2RRP1 2371 aa14.86□□□□□ -0.03
SKA3-204ENST00000462482 ZNF106Q9H2Y7 1883 aaKnown RBP14.86□□□□□ -0.03
SKA3-204ENST00000462482 DOPEY2Q9Y3R5 2298 aa14.85□□□□□ -0.03
SKA3-204ENST00000462482 SOWAHDA6NJG2 315 aa14.85□□□□□ -0.03
SKA3-204ENST00000462482 MIF4GDA9UHW6 222 aaKnown RBP14.85□□□□□ -0.03
SKA3-204ENST00000462482 TCP11X1B4DZS4 312 aa14.85□□□□□ -0.03
SKA3-204ENST00000462482 RPN2P04844 631 aa14.85□□□□□ -0.03
SKA3-204ENST00000462482 CBSLP0DN79 551 aa14.85□□□□□ -0.03
SKA3-204ENST00000462482 PIM1P11309 404 aaPredicted RBP14.85□□□□□ -0.03
SKA3-204ENST00000462482 CBSP35520 551 aa14.85□□□□□ -0.03
SKA3-204ENST00000462482 ELOAQ14241 798 aaKnown RBP14.85□□□□□ -0.03
SKA3-204ENST00000462482 EIF2S3LQ2VIR3 472 aaKnown RBP14.85□□□□□ -0.03
SKA3-204ENST00000462482 DCAF10Q5QP82 559 aa14.85□□□□□ -0.03
SKA3-204ENST00000462482 IRAK1BP1Q5VVH5 260 aa14.85□□□□□ -0.03
SKA3-204ENST00000462482 ZNF385CQ66K41 422 aaPredicted RBP14.85□□□□□ -0.03
SKA3-204ENST00000462482 PACS1Q6VY07 963 aa14.85□□□□□ -0.03
SKA3-204ENST00000462482 GALNT16Q8N428 558 aa14.85□□□□□ -0.03
SKA3-204ENST00000462482 ZADH2Q8N4Q0 377 aa14.85□□□□□ -0.03
SKA3-204ENST00000462482 ZNF655Q8N720 491 aaPredicted RBP14.85□□□□□ -0.03
SKA3-204ENST00000462482 RBMXL3Q8N7X1 1067 aaKnown RBP14.85□□□□□ -0.03
SKA3-204ENST00000462482 OR2Y1Q8NGV0 311 aa14.85□□□□□ -0.03
SKA3-204ENST00000462482 OR5K2Q8NHB8 316 aa14.85□□□□□ -0.03
SKA3-204ENST00000462482 PRR7Q8TB68 274 aa14.85□□□□□ -0.03
SKA3-204ENST00000462482 ALG3Q92685 438 aa14.85□□□□□ -0.03
SKA3-204ENST00000462482 SLC22A18Q96BI1 424 aa14.85□□□□□ -0.03
SKA3-204ENST00000462482 PTERQ96BW5 349 aa14.85□□□□□ -0.03
SKA3-204ENST00000462482 OR2A14Q96R47 310 aa14.85□□□□□ -0.03
SKA3-204ENST00000462482 NRTNQ99748 197 aa14.85□□□□□ -0.03
SKA3-204ENST00000462482 SPRTNQ9H040 489 aaPredicted RBP14.85□□□□□ -0.03
SKA3-204ENST00000462482 FAM60AQ9NP50 221 aa14.85□□□□□ -0.03
SKA3-204ENST00000462482 B3GNT3Q9Y2A9 372 aa14.85□□□□□ -0.03
SKA3-204ENST00000462482 DUSP10Q9Y6W6 482 aa14.85□□□□□ -0.03
SKA3-204ENST00000462482 HEATR9A2RTY3 570 aa14.84□□□□□ -0.03
SKA3-204ENST00000462482 RCCD1A6NED2 376 aa14.84□□□□□ -0.03
SKA3-204ENST00000462482 ERI2A8K979 691 aaKnown RBP14.84□□□□□ -0.03
SKA3-204ENST00000462482 E7EVH7 732 aa14.84□□□□□ -0.03
SKA3-204ENST00000462482 KLF7O75840 302 aaPredicted RBP14.84□□□□□ -0.03
SKA3-204ENST00000462482 METTL18O95568 372 aa14.84□□□□□ -0.03
SKA3-204ENST00000462482 ACADLP28330 430 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms