RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 KCNJ13O60928 360 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 USP1O94782 785 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 GP1BAP07359 652 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 CKMT1AP12532 417 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 ZNF8P17098 575 aaPredicted RBP5.64□□□□□ -1.51
VPS36-202ENST00000462289 ACRV1P26436 265 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 HTR1BP28222 390 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 ECHS1P30084 290 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 ADCY8P40145 1251 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 PAFAH1B1P43034 410 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 GPR1P46091 355 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 RPL21P46778 160 aaKnown RBP5.64□□□□□ -1.51
VPS36-202ENST00000462289 FASLGP48023 281 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 PRLHRP49683 370 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 ACADVLP49748 655 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 THOP1P52888 689 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 GUCY2DQ02846 1103 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 PPARDQ03181 441 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 ILKQ13418 452 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 SQSTM1Q13501 440 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 GBX1Q14549 363 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 ITIH4Q14624 930 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 POU6F1Q14863 301 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 SKIDA1Q1XH10 827 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 AASDHQ4L235 1098 aaPredicted RBP5.64□□□□□ -1.51
VPS36-202ENST00000462289 LDLRAP1Q5SW96 308 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 GPRC6AQ5T6X5 926 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 AGAP9Q5VTM2 703 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 FBXW10Q5XX13 1052 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 RAET1GQ6H3X3 334 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 ZCCHC8Q6NZY4 707 aaKnown RBP5.64□□□□□ -1.51
VPS36-202ENST00000462289 ZNF449Q6P9G9 518 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 ABRAXAS1Q6UWZ7 409 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 ZDHHC24Q6UX98 284 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 PCGF5Q86SE9 256 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 PHYKPLQ8IUZ5 450 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 NAXDQ8IW45 347 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 RBFAQ8N0V3 343 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 ZNF398Q8TD17 642 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 HEXDCQ8WVB3 486 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 ART4Q93070 314 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 LRRC45Q96CN5 670 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 TSPAN17Q96FV3 270 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 ZNF514Q96K75 400 aaPredicted RBP5.64□□□□□ -1.51
VPS36-202ENST00000462289 CAPZA3Q96KX2 299 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 NAT9Q9BTE0 207 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 FUT8Q9BYC5 575 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 FAM129AQ9BZQ8 928 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 TMEM168Q9H0V1 697 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 CHRAC1Q9NRG0 131 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 BFARQ9NZS9 450 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 SPASTQ9UBP0 616 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 KLQ9UEF7 1012 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 SLC2A6Q9UGQ3 507 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 APOBEC3BQ9UH17 382 aaKnown RBP5.64□□□□□ -1.51
VPS36-202ENST00000462289 CD84Q9UIB8 345 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 SUFUQ9UMX1 484 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 MED16Q9Y2X0 877 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 PKP3Q9Y446 797 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 LAMA5O15230 3695 aa5.64□□□□□ -1.51
VPS36-202ENST00000462289 ZZEF1O43149 2961 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 C17orf113A0A1B0GUU1 675 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 CCDC162PA2VCL2 907 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 NEMP2A6NFY4 417 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 SDR42E2A6NKP2 422 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 NDC80O14777 642 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 EIF3HO15372 352 aaKnown RBP eCLIP5.63□□□□□ -1.51
VPS36-202ENST00000462289 YY2O15391 372 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 TNFSF14O43557 240 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 BUD23O43709 281 aaKnown RBP5.63□□□□□ -1.51
VPS36-202ENST00000462289 UGT1A9O60656 530 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 AVILO75366 819 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 SLC25A14O95258 325 aaPredicted RBP5.63□□□□□ -1.51
VPS36-202ENST00000462289 KCNK5O95279 499 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 CDK4P11802 303 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 BRAFP15056 766 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 TPH1P17752 444 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 UGT1A6P19224 532 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 OGNP20774 298 aaKnown RBP5.63□□□□□ -1.51
VPS36-202ENST00000462289 CD9P21926 228 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 UGT1A1P22309 533 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 UGT1A4P22310 534 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 RPS3P23396 243 aaKnown RBP eCLIP5.63□□□□□ -1.51
VPS36-202ENST00000462289 TACR1P25103 407 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 NMBRP28336 390 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 UGT1A3P35503 534 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 UGT1A5P35504 534 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 POLD2P49005 469 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 CDKN1CP49918 316 aaPredicted RBP5.63□□□□□ -1.51
VPS36-202ENST00000462289 CTSCP53634 463 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 BASP1P80723 227 aaKnown RBP5.63□□□□□ -1.51
VPS36-202ENST00000462289 SHC2P98077 582 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 CACNG1Q06432 222 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 CKAP4Q07065 602 aaKnown RBP5.63□□□□□ -1.51
VPS36-202ENST00000462289 TMEM115Q12893 351 aaPredicted RBP5.63□□□□□ -1.51
VPS36-202ENST00000462289 HLTFQ14527 1009 aaKnown RBP eCLIP5.63□□□□□ -1.51
VPS36-202ENST00000462289 SEMA3AQ14563 771 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 ELOCQ15369 112 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 TRIP13Q15645 432 aaPredicted RBP5.63□□□□□ -1.51
VPS36-202ENST00000462289 KCTD19Q17RG1 926 aaPredicted RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms