RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 TCF7L2Q9NQB0 619 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 TRMT1Q9NXH9 659 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 VSX1Q9NZR4 365 aaPredicted RBP4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 LPAR3Q9UBY5 353 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 RASAL2Q9UJF2 1139 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 SLC13A4Q9UKG4 626 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 CDH7Q9ULB5 785 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 TMCC3Q9ULS5 477 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 SCML2Q9UQR0 700 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 PRELID1Q9Y255 219 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 NOSIPQ9Y314 301 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 CPQQ9Y646 472 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 WNT6Q9Y6F9 365 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 SDK1Q7Z5N4 2213 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 TICRRQ7Z2Z1 1910 aa4.82□□□□□ -1.64
ATPAF1-203ENST00000460928 USP9XQ93008 2570 aaPredicted RBP4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 ITIH6Q6UXX5 1313 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 MYO18AQ92614 2054 aaKnown RBP4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 FAM92AA1XBS5 289 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 HEPACAM2A8MVW5 462 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 I6L893 689 aaPredicted RBP4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 M0R296 226 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 NDUFAB1O14561 156 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 RGS10O43665 173 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 IDH3BO43837 385 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 TSPAN3O60637 253 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 OAS1P00973 400 aaKnown RBP4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 KLKB1P03952 638 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 ZDHHC11BP0C7U3 371 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 MBL2P11226 248 aaPredicted RBP4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 UNGP13051 313 aaPredicted RBP4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 TCF4P15884 667 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 RRM1P23921 792 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 MST1P26927 711 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 NBL1P41271 181 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 PXNP49023 591 aaPredicted RBP4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 ZNF134P52741 427 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 YWHAGP61981 247 aaKnown RBP eCLIP4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 RPL7AP62424 266 aaKnown RBP4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 GPC5P78333 572 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 BLOC1S1P78537 153 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 MRPS21P82921 87 aaKnown RBP4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 KLHL30Q0D2K2 578 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 WASHC5Q12768 1159 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 SMARCB1Q12824 385 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 EFR3AQ14156 821 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 CASP8Q14790 479 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 NDUFA5Q16718 116 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 C15orf59Q2T9L4 293 aaPredicted RBP4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 ZIK1Q3SY52 487 aaPredicted RBP4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 TDRD12Q587J7 1177 aaKnown RBP4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 C10orf120Q5SQS8 335 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 FAM182AQ5T1J6 154 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 ATPAF1Q5TC12 328 aaPredicted RBP4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 RAD9BQ6WBX8 426 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 C3orf62Q6ZUJ4 267 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 NEK10Q6ZWH5 1172 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 KRT77Q7Z794 578 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 MON1AQ86VX9 555 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 ERICH1Q86X53 443 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 SYT12Q8IV01 421 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 RASGRP3Q8IV61 690 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 CPOQ8IVL8 374 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 ADHFE1Q8IWW8 467 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 BBS7Q8IWZ6 715 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 SLC15A3Q8IY34 581 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 CCDC13Q8IYE1 715 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 SAMD14Q8IZD0 417 aaPredicted RBP4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 CMTM8Q8IZV2 173 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 SLC7A5P1Q8MH63 180 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 DEFB106AQ8N104 65 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 SLC44A3Q8N4M1 653 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 SUN5Q8TC36 379 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 NSMCE1Q8WV22 266 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 LINC00476Q8WZB0 136 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 MRPS31Q92665 395 aaKnown RBP4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 FAM149B1Q96BN6 582 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 ERLEC1Q96DZ1 483 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 SLITRK1Q96PX8 696 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 NR1H4Q96RI1 486 aaPredicted RBP4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 RTKNQ9BST9 563 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 DESI2Q9BSY9 194 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 SLC25A32Q9H2D1 315 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 TASP1Q9H6P5 420 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 FBRSL1Q9HCM7 1045 aaKnown RBP4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 SEPSECSQ9HD40 501 aaKnown RBP4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 ZDHHC4Q9NPG8 344 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 WASH6PQ9NQA3 447 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 PRDM8Q9NQV8 689 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 ABHD10Q9NUJ1 306 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 GTSE1Q9NYZ3 720 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 AIPL1Q9NZN9 384 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 HSFX1Q9UBD0 423 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 XPO7Q9UIA9 1087 aaKnown RBP4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 KIAA1257Q9ULG3 409 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 CLEC4EQ9ULY5 219 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 FRYQ5TBA9 3013 aa4.81□□□□□ -1.64
ATPAF1-203ENST00000460928 HELZP42694 1942 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms