RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 RPL6Q02878 288 aaKnown RBP16.4■□□□□ 0.22
NELFCD-201ENST00000460601 GALNT1Q10472 559 aaPredicted RBP16.4■□□□□ 0.22
NELFCD-201ENST00000460601 PTCHD3Q3KNS1 767 aa16.4■□□□□ 0.22
NELFCD-201ENST00000460601 TRPM8Q7Z2W7 1104 aa16.4■□□□□ 0.22
NELFCD-201ENST00000460601 ABI3BPQ7Z7G0 1075 aa16.4■□□□□ 0.22
NELFCD-201ENST00000460601 PDZD3Q86UT5 571 aa16.4■□□□□ 0.22
NELFCD-201ENST00000460601 WDR92Q96MX6 357 aa16.4■□□□□ 0.22
NELFCD-201ENST00000460601 FOPNLQ96NB1 174 aa16.4■□□□□ 0.22
NELFCD-201ENST00000460601 OR52B2Q96RD2 323 aa16.4■□□□□ 0.22
NELFCD-201ENST00000460601 PKP4Q99569 1192 aa16.4■□□□□ 0.22
NELFCD-201ENST00000460601 TRMOQ9BU70 441 aa16.4■□□□□ 0.22
NELFCD-201ENST00000460601 TRIM54Q9BYV2 358 aa16.4■□□□□ 0.22
NELFCD-201ENST00000460601 WWP1Q9H0M0 922 aa16.4■□□□□ 0.22
NELFCD-201ENST00000460601 IPPKQ9H8X2 491 aa16.4■□□□□ 0.22
NELFCD-201ENST00000460601 TRAF6Q9Y4K3 522 aa16.4■□□□□ 0.22
NELFCD-201ENST00000460601 ZDBF2Q9HCK1 2354 aa16.4■□□□□ 0.22
NELFCD-201ENST00000460601 SLC16A5O15375 505 aa16.4■□□□□ 0.22
NELFCD-201ENST00000460601 HDAC3O15379 428 aa16.4■□□□□ 0.22
NELFCD-201ENST00000460601 KATNA1O75449 491 aa16.4■□□□□ 0.22
NELFCD-201ENST00000460601 SIGLEC14Q08ET2 396 aa16.4■□□□□ 0.22
NELFCD-201ENST00000460601 PRKG2Q13237 762 aa16.4■□□□□ 0.22
NELFCD-201ENST00000460601 TUBB3Q13509 450 aa16.4■□□□□ 0.22
NELFCD-201ENST00000460601 TCHHL1Q5QJ38 904 aaPredicted RBP16.4■□□□□ 0.22
NELFCD-201ENST00000460601 LETMD1Q6P1Q0 360 aa16.4■□□□□ 0.22
NELFCD-201ENST00000460601 CAMKK1Q8N5S9 505 aa16.4■□□□□ 0.22
NELFCD-201ENST00000460601 ERP27Q96DN0 273 aa16.4■□□□□ 0.22
NELFCD-201ENST00000460601 SCARF2Q96GP6 870 aaPredicted RBP16.4■□□□□ 0.22
NELFCD-201ENST00000460601 RILPQ96NA2 401 aa16.4■□□□□ 0.22
NELFCD-201ENST00000460601 TMEM168Q9H0V1 697 aa16.4■□□□□ 0.22
NELFCD-201ENST00000460601 TCEAL2Q9H3H9 227 aaPredicted RBP16.4■□□□□ 0.22
NELFCD-201ENST00000460601 PRDM8Q9NQV8 689 aa16.4■□□□□ 0.22
NELFCD-201ENST00000460601 OPTCQ9UBM4 332 aa16.4■□□□□ 0.22
NELFCD-201ENST00000460601 KLF15Q9UIH9 416 aa16.4■□□□□ 0.22
NELFCD-201ENST00000460601 SLC22A14Q9Y267 594 aa16.4■□□□□ 0.22
NELFCD-201ENST00000460601 DNAJC15Q9Y5T4 150 aa16.4■□□□□ 0.22
NELFCD-201ENST00000460601 PRAMEF33A0A0G2JMD5 474 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 OR52A4PA6NMU1 304 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 STK16O75716 305 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 OR4F21O95013 312 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 CATP04040 527 aaKnown RBP16.39■□□□□ 0.21
NELFCD-201ENST00000460601 EPORP19235 508 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 HTR1BP28222 390 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 IMPA1P29218 277 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 ERVPABLB-1P60509 514 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 ALG11Q2TAA5 492 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 UGT3A2Q3SY77 523 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 EPGNQ6UW88 154 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 TFGQ92734 400 aaPredicted RBP16.39■□□□□ 0.21
NELFCD-201ENST00000460601 NMUR2Q9GZQ4 415 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 AASDHPPTQ9NRN7 309 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 KLQ9UEF7 1012 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 TMCO1Q9UM00 188 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 TNPO3Q9Y5L0 923 aaKnown RBP16.39■□□□□ 0.21
NELFCD-201ENST00000460601 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 ATP6AP2A0A1C7CYW4 349 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 PABPN1LA6NDY0 278 aaKnown RBP16.39■□□□□ 0.21
NELFCD-201ENST00000460601 VGLL3A8MV65 326 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 ANKRD65E5RJM6 399 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 AXIN1O15169 862 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 ATP6AP2O75787 350 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 WDR47O94967 919 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 EML2O95834 649 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 AP1S2P56377 157 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 CDKL1Q00532 357 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 BTKQ06187 659 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 CLCA4Q14CN2 919 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 ARMCX6Q7L4S7 300 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 TMEFF1Q8IYR6 380 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 CDYL2Q8N8U2 506 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 UBTD2Q8WUN7 234 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 MED8Q96G25 268 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 HSPA12BQ96MM6 686 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 IL17FQ96PD4 163 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 LRRC37BQ96QE4 947 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 OR2M4Q96R27 311 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 HBEGFQ99075 208 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 TIMM29Q9BSF4 260 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 MYLK2Q9H1R3 596 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 RASSF4Q9H2L5 321 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 INTS7Q9NVH2 962 aaKnown RBP16.39■□□□□ 0.21
NELFCD-201ENST00000460601 SPATA6Q9NWH7 488 aaPredicted RBP16.39■□□□□ 0.21
NELFCD-201ENST00000460601 ARMCX1Q9P291 453 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 STOX2Q9P2F5 926 aaPredicted RBP16.39■□□□□ 0.21
NELFCD-201ENST00000460601 BTRCQ9Y297 605 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 HS3ST3A1Q9Y663 406 aa16.39■□□□□ 0.21
NELFCD-201ENST00000460601 DNMT3AQ9Y6K1 912 aaPredicted RBP16.39■□□□□ 0.21
NELFCD-201ENST00000460601 E9PBE3 544 aa16.38■□□□□ 0.21
NELFCD-201ENST00000460601 K7EPI3 171 aa16.38■□□□□ 0.21
NELFCD-201ENST00000460601 KLHL41O60662 606 aa16.38■□□□□ 0.21
NELFCD-201ENST00000460601 RASGRP1O95267 797 aa16.38■□□□□ 0.21
NELFCD-201ENST00000460601 HOXC4P09017 264 aaPredicted RBP16.38■□□□□ 0.21
NELFCD-201ENST00000460601 SLC35G4P0C7Q5 338 aa16.38■□□□□ 0.21
NELFCD-201ENST00000460601 THEGLP0DJG4 465 aa16.38■□□□□ 0.21
NELFCD-201ENST00000460601 SRP54P61011 504 aaKnown RBP16.38■□□□□ 0.21
NELFCD-201ENST00000460601 DMPKQ09013 629 aa16.38■□□□□ 0.21
NELFCD-201ENST00000460601 SLC30A9Q6PML9 568 aa16.38■□□□□ 0.21
NELFCD-201ENST00000460601 HID1Q8IV36 788 aa16.38■□□□□ 0.21
NELFCD-201ENST00000460601 C2orf73Q8N5S3 287 aaPredicted RBP16.38■□□□□ 0.21
NELFCD-201ENST00000460601 OR4F6Q8NGB9 312 aa16.38■□□□□ 0.21
NELFCD-201ENST00000460601 CCT6BQ92526 530 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms