RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 CTAGE3PQ8IX95 158 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 LKAAEAR1Q8TD35 194 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 RBBP8Q99708 897 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 ACSS3Q9H6R3 686 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 FBXO8Q9NRD0 319 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 FETUBQ9UGM5 382 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 DMGDHQ9UI17 866 aaKnown RBP10.39□□□□□ -0.75
UBR4-208ENST00000459947 PIPSLA2A3N6 862 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 TRABD2BA6NFA1 517 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 CAPN5O15484 640 aaPredicted RBP10.39□□□□□ -0.75
UBR4-208ENST00000459947 ZBTB11O95625 1053 aaPredicted RBP10.39□□□□□ -0.75
UBR4-208ENST00000459947 AHSGP02765 367 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 HIST1H2AGP0C0S8 130 aaPredicted RBP10.39□□□□□ -0.75
UBR4-208ENST00000459947 HIST1H2ADP20671 130 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 CRABP2P29373 138 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 PDHA2P29803 388 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 MAP7Q14244 749 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 CDKL4Q5MAI5 379 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 TEX35Q5T0J7 233 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 XKR5Q6UX68 686 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 SIDT2Q8NBJ9 832 aaKnown RBP10.39□□□□□ -0.75
UBR4-208ENST00000459947 OR9A1PQ8NGU1 263 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 SNIP1Q8TAD8 396 aaKnown RBP10.39□□□□□ -0.75
UBR4-208ENST00000459947 CD200R1Q8TD46 325 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 DENND1AQ8TEH3 1009 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 HIST1H2AHQ96KK5 128 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 HIST1H2AJQ99878 128 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 NUDT22Q9BRQ3 303 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 H2AFJQ9BTM1 129 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 BTRCQ9Y297 605 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 ZNF292O60281 2723 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 MSL3P1P0C860 447 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 CSF2RBP32927 897 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 ATP6V0D1P61421 351 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 ABRQ12979 859 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 USP53Q70EK8 1073 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 KDF1Q8NAX2 398 aaPredicted RBP10.39□□□□□ -0.75
UBR4-208ENST00000459947 SMPDL3AQ92484 453 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 ATXN7L3BQ96GX2 97 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 PDE7BQ9NP56 450 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 ATXN7L1Q9ULK2 861 aaPredicted RBP10.39□□□□□ -0.75
UBR4-208ENST00000459947 OR6C74A6NCV1 312 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 MYO1CO00159 1063 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 NVLO15381 856 aaKnown RBP10.38□□□□□ -0.75
UBR4-208ENST00000459947 C1orf105O95561 183 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 MT-ND3P03897 115 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 OAS2P29728 719 aaKnown RBP10.38□□□□□ -0.75
UBR4-208ENST00000459947 ATP1A2P50993 1020 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 KPNA2P52292 529 aaKnown RBP10.38□□□□□ -0.75
UBR4-208ENST00000459947 PCBP4P57723 403 aaKnown RBP10.38□□□□□ -0.75
UBR4-208ENST00000459947 ABATP80404 500 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 MC2RQ01718 297 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 IL11RAQ14626 422 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 TBC1D25Q3MII6 688 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 ZNF549Q6P9A3 640 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 TRMT10BQ6PF06 316 aaKnown RBP10.38□□□□□ -0.75
UBR4-208ENST00000459947 ADAMTSL2Q86TH1 951 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 CCDC138Q96M89 665 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 GPR22Q99680 433 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 WDR83Q9BRX9 315 aaKnown RBP10.38□□□□□ -0.75
UBR4-208ENST00000459947 EFHD1Q9BUP0 239 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 ACTR10Q9NZ32 417 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 NINJ2Q9NZG7 142 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 OGFRQ9NZT2 677 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 TDRKHQ9Y2W6 561 aaKnown RBP10.38□□□□□ -0.75
UBR4-208ENST00000459947 A0A0J9YY10 115 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 CDH3P22223 829 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 UCNP55089 124 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 FASTKD3Q14CZ7 662 aaKnown RBP10.38□□□□□ -0.75
UBR4-208ENST00000459947 BRD3Q15059 726 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 CYP2A13Q16696 494 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 TCAIMQ8N3R3 496 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 FBF1Q8TES7 1133 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 SLC41A2Q96JW4 573 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 LRRC4CQ9HCJ2 640 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 TMCO1Q9UM00 188 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 ESYT3A0FGR9 886 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 RRP8O43159 456 aaKnown RBP10.38□□□□□ -0.75
UBR4-208ENST00000459947 RASSF9O75901 435 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 KRT38O76015 456 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 HBQ1P09105 142 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 SSTR1P30872 391 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 HSD11B2P80365 405 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 MRPS25P82663 173 aaKnown RBP10.38□□□□□ -0.75
UBR4-208ENST00000459947 TAF1BQ53T94 588 aaPredicted RBP10.38□□□□□ -0.75
UBR4-208ENST00000459947 ACSBG2Q5FVE4 666 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 DCAF12Q5T6F0 453 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 LRRC69Q6ZNQ3 347 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 OR5AR1Q8NGP9 310 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 CABS1Q96KC9 395 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 PWWP2AQ96N64 755 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 TGM7Q96PF1 710 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 TWSG1Q9GZX9 223 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 ZNF180Q9UJW8 692 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 ICKQ9UPZ9 632 aa10.38□□□□□ -0.75
UBR4-208ENST00000459947 GSAPA4D1B5 854 aa10.37□□□□□ -0.75
UBR4-208ENST00000459947 INHBAP08476 426 aa10.37□□□□□ -0.75
UBR4-208ENST00000459947 CHRM5P08912 532 aaPredicted RBP10.37□□□□□ -0.75
UBR4-208ENST00000459947 STMN1P16949 149 aa10.37□□□□□ -0.75
UBR4-208ENST00000459947 TYRP1P17643 537 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms