RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 OR4D2P58180 307 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 NTHL1P78549 312 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 HSPA14Q0VDF9 509 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 SELPLGQ14242 412 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 ZXDCQ2QGD7 858 aaPredicted RBP16.3■□□□□ 0.2
CCDC43-202ENST00000457422 IYDQ6PHW0 289 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 NEK10Q6ZWH5 1172 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 SATL1Q86VE3 508 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 VRK3Q8IV63 474 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 AADATQ8N5Z0 425 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 LEMD2Q8NC56 503 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 SORCS1Q8WY21 1168 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 TFAP2CQ92754 450 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 GTF2H4Q92759 462 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 PRPF18Q99633 342 aaKnown RBP16.3■□□□□ 0.2
CCDC43-202ENST00000457422 DPY30Q9C005 99 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 PIF1Q9H611 641 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 CLMPQ9H6B4 373 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 ACTR8Q9H981 624 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 CXXC1Q9P0U4 656 aaPredicted RBP16.3■□□□□ 0.2
CCDC43-202ENST00000457422 WNT6Q9Y6F9 365 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 PDE4DIPQ5VU43 2346 aa16.29■□□□□ 0.2
CCDC43-202ENST00000457422 FAM149AA5PLN7 773 aa16.29■□□□□ 0.2
CCDC43-202ENST00000457422 NPIPB8E9PQR5 432 aa16.29■□□□□ 0.2
CCDC43-202ENST00000457422 AP2A2O94973 939 aa16.29■□□□□ 0.2
CCDC43-202ENST00000457422 HIST1H2AGP0C0S8 130 aaPredicted RBP16.29■□□□□ 0.2
CCDC43-202ENST00000457422 HIST1H2ADP20671 130 aa16.29■□□□□ 0.2
CCDC43-202ENST00000457422 USP39Q53GS9 565 aaKnown RBP16.29■□□□□ 0.2
CCDC43-202ENST00000457422 TMTC4Q5T4D3 741 aa16.29■□□□□ 0.2
CCDC43-202ENST00000457422 SERPINA13PQ6UXR4 307 aa16.29■□□□□ 0.2
CCDC43-202ENST00000457422 HSD11B1LQ7Z5J1 315 aa16.29■□□□□ 0.2
CCDC43-202ENST00000457422 RASGRP3Q8IV61 690 aa16.29■□□□□ 0.2
CCDC43-202ENST00000457422 GALNT15Q8N3T1 639 aa16.29■□□□□ 0.2
CCDC43-202ENST00000457422 LIX1Q8N485 282 aa16.29■□□□□ 0.2
CCDC43-202ENST00000457422 CBR4Q8N4T8 237 aa16.29■□□□□ 0.2
CCDC43-202ENST00000457422 NAT16Q8N8M0 369 aa16.29■□□□□ 0.2
CCDC43-202ENST00000457422 SP7Q8TDD2 431 aaPredicted RBP16.29■□□□□ 0.2
CCDC43-202ENST00000457422 SKA2Q8WVK7 121 aaPredicted RBP16.29■□□□□ 0.2
CCDC43-202ENST00000457422 BIRC7Q96CA5 298 aa16.29■□□□□ 0.2
CCDC43-202ENST00000457422 HIST1H2AHQ96KK5 128 aa16.29■□□□□ 0.2
CCDC43-202ENST00000457422 MRGPRX3Q96LB0 322 aa16.29■□□□□ 0.2
CCDC43-202ENST00000457422 CCDC115Q96NT0 180 aa16.29■□□□□ 0.2
CCDC43-202ENST00000457422 HIST1H2AJQ99878 128 aa16.29■□□□□ 0.2
CCDC43-202ENST00000457422 H2AFJQ9BTM1 129 aa16.29■□□□□ 0.2
CCDC43-202ENST00000457422 ACPTQ9BZG2 426 aa16.29■□□□□ 0.2
CCDC43-202ENST00000457422 FAM83DQ9H4H8 585 aa16.29■□□□□ 0.2
CCDC43-202ENST00000457422 RAD18Q9NS91 495 aa16.29■□□□□ 0.2
CCDC43-202ENST00000457422 PNPLA3Q9NST1 481 aa16.29■□□□□ 0.2
CCDC43-202ENST00000457422 HCFC2Q9Y5Z7 792 aa16.29■□□□□ 0.2
CCDC43-202ENST00000457422 KCNE1BA0A087WTH5 132 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 MYOCOSA0A1B0GUC4 107 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 TTC34A8MYJ7 566 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 CFAP99D6REC4 459 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 DLGAP1O14490 977 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 SEC22BO75396 215 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 MTX2O75431 263 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 RASAL1O95294 804 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 PCSK2P16519 638 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 POLR2EP19388 210 aaKnown RBP16.28■□□□□ 0.2
CCDC43-202ENST00000457422 PRPH2P23942 346 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 NFKBIAP25963 317 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 VASPP50552 380 aaPredicted RBP16.28■□□□□ 0.2
CCDC43-202ENST00000457422 AP1S2P56377 157 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 MTPNP58546 118 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 BOP1Q14137 746 aaKnown RBP16.28■□□□□ 0.2
CCDC43-202ENST00000457422 FAM174BQ3ZCQ3 159 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 GLYATQ6IB77 296 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 SUSD1Q6UWL2 747 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 RALGPS2Q86X27 583 aaPredicted RBP16.28■□□□□ 0.2
CCDC43-202ENST00000457422 L3MBTL4Q8NA19 623 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 SCAMP4Q969E2 229 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 NSMCE2Q96MF7 247 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 ZSWIM3Q96MP5 696 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 ZFP14Q9HCL3 533 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 PAPOLBQ9NRJ5 636 aaKnown RBP16.28■□□□□ 0.2
CCDC43-202ENST00000457422 PRRC2BQ5JSZ5 2229 aaKnown RBP16.28■□□□□ 0.2
CCDC43-202ENST00000457422 SERTM1A2A2V5 107 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 ENO4A6NNW6 628 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 UPK3BL1B0FP48 263 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 UPK3BL2E5RIL1 263 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 ACOX3O15254 700 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 SGTAO43765 313 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 LEFTY1O75610 366 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 FGBP02675 491 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 PGRP06401 933 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 CYP2A7P20853 494 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 PLIN5Q00G26 463 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 ADRM1Q16186 407 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 MAPKAPK3Q16644 382 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 SLC44A4Q53GD3 710 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 PRSS36Q5K4E3 855 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 DTWD1Q8N5C7 304 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 TRAM1L1Q8N609 369 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 DDHD1Q8NEL9 900 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 ZFAND2BQ8WV99 257 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 POF1BQ8WVV4 589 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 MTFMTQ96DP5 389 aaKnown RBP16.28■□□□□ 0.2
CCDC43-202ENST00000457422 FAM83CQ9BQN1 747 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 SLC24A3Q9HC58 644 aa16.28■□□□□ 0.2
CCDC43-202ENST00000457422 VAPAQ9P0L0 249 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms