RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 CPA6Q8N4T0 437 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 ASB11Q8WXH4 323 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 CCT7Q99832 543 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 KCTD14Q9BQ13 255 aaPredicted RBP13.34□□□□□ -0.27
CLK3-203ENST00000454830 SLC12A9Q9BXP2 914 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 INTS7Q9NVH2 962 aaKnown RBP13.34□□□□□ -0.27
CLK3-203ENST00000454830 SOBPA7XYQ1 873 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 SLC28A1O00337 649 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 LINC01565O15544 149 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 C6P13671 934 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 PDHA2P29803 388 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 ELP6Q0PNE2 266 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 PLEKHS1Q5SXH7 462 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 SLC15A3Q8IY34 581 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 RNF175Q8N4F7 328 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 C2orf73Q8N5S3 287 aaPredicted RBP13.34□□□□□ -0.27
CLK3-203ENST00000454830 KLK6Q92876 244 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 SAMD11Q96NU1 681 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 DLGAP2Q9P1A6 1054 aa13.34□□□□□ -0.27
CLK3-203ENST00000454830 MATN4O95460 622 aa13.33□□□□□ -0.27
CLK3-203ENST00000454830 EBLN1P0CF75 366 aa13.33□□□□□ -0.27
CLK3-203ENST00000454830 RUNX3Q13761 415 aa13.33□□□□□ -0.27
CLK3-203ENST00000454830 DSG4Q86SJ6 1040 aa13.33□□□□□ -0.27
CLK3-203ENST00000454830 PLPP6Q8IY26 295 aa13.33□□□□□ -0.27
CLK3-203ENST00000454830 PKP2Q99959 881 aa13.33□□□□□ -0.27
CLK3-203ENST00000454830 THUMPD3Q9BV44 507 aaKnown RBP13.33□□□□□ -0.27
CLK3-203ENST00000454830 SUCOQ9UBS9 1254 aaKnown RBP13.33□□□□□ -0.27
CLK3-203ENST00000454830 TMEM98Q9Y2Y6 226 aa13.33□□□□□ -0.27
CLK3-203ENST00000454830 FAM234BA2RU67 622 aa13.33□□□□□ -0.28
CLK3-203ENST00000454830 C1QTNF3-AMACRE9PGA6 284 aa13.33□□□□□ -0.28
CLK3-203ENST00000454830 H3BNX3 289 aa13.33□□□□□ -0.28
CLK3-203ENST00000454830 LSM1O15116 133 aaKnown RBP13.33□□□□□ -0.28
CLK3-203ENST00000454830 NUAK1O60285 661 aa13.33□□□□□ -0.28
CLK3-203ENST00000454830 GMNNO75496 209 aa13.33□□□□□ -0.28
CLK3-203ENST00000454830 ADRB3P13945 408 aa13.33□□□□□ -0.28
CLK3-203ENST00000454830 IL12AP29459 219 aa13.33□□□□□ -0.28
CLK3-203ENST00000454830 IL12RB1P42701 662 aa13.33□□□□□ -0.28
CLK3-203ENST00000454830 EMX2Q04743 252 aa13.33□□□□□ -0.28
CLK3-203ENST00000454830 PGS1Q32NB8 556 aa13.33□□□□□ -0.28
CLK3-203ENST00000454830 FAM174BQ3ZCQ3 159 aa13.33□□□□□ -0.28
CLK3-203ENST00000454830 PRMT9Q6P2P2 845 aa13.33□□□□□ -0.28
CLK3-203ENST00000454830 PROKR1Q8TCW9 393 aa13.33□□□□□ -0.28
CLK3-203ENST00000454830 APOLD1Q96LR9 279 aa13.33□□□□□ -0.28
CLK3-203ENST00000454830 MTERF1Q99551 399 aaKnown RBP13.33□□□□□ -0.28
CLK3-203ENST00000454830 VCXQ9H320 206 aa13.33□□□□□ -0.28
CLK3-203ENST00000454830 SNX6Q9UNH7 406 aa13.33□□□□□ -0.28
CLK3-203ENST00000454830 NUP214P35658 2090 aaPredicted RBP13.33□□□□□ -0.28
CLK3-203ENST00000454830 TIPRLO75663 272 aa13.33□□□□□ -0.28
CLK3-203ENST00000454830 KAT7O95251 611 aa13.33□□□□□ -0.28
CLK3-203ENST00000454830 PDYNP01213 254 aa13.33□□□□□ -0.28
CLK3-203ENST00000454830 MTHFD1P11586 935 aaKnown RBP13.33□□□□□ -0.28
CLK3-203ENST00000454830 PCNAP12004 261 aa13.33□□□□□ -0.28
CLK3-203ENST00000454830 SOX9P48436 509 aa13.33□□□□□ -0.28
CLK3-203ENST00000454830 MTPNP58546 118 aa13.33□□□□□ -0.28
CLK3-203ENST00000454830 NRF1Q16656 503 aa13.33□□□□□ -0.28
CLK3-203ENST00000454830 CCSMST1Q4G0I0 132 aa13.33□□□□□ -0.28
CLK3-203ENST00000454830 C9orf64Q5T6V5 341 aa13.33□□□□□ -0.28
CLK3-203ENST00000454830 ANO7Q6IWH7 933 aa13.33□□□□□ -0.28
CLK3-203ENST00000454830 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.33□□□□□ -0.28
CLK3-203ENST00000454830 CCM2Q9BSQ5 444 aa13.33□□□□□ -0.28
CLK3-203ENST00000454830 RDH14Q9HBH5 336 aa13.33□□□□□ -0.28
CLK3-203ENST00000454830 FBXO10Q9UK96 956 aa13.33□□□□□ -0.28
CLK3-203ENST00000454830 GBF1Q92538 1859 aa13.33□□□□□ -0.28
CLK3-203ENST00000454830 IGLV3-16A0A075B6K0 115 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 GJA4P35212 333 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 GCKP35557 465 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 LIPEQ05469 1076 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 MED21Q13503 144 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 KIAA0907Q7Z7F0 614 aaPredicted RBP13.32□□□□□ -0.28
CLK3-203ENST00000454830 ETFBKMTQ8IXQ9 262 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 KRTCAP2Q8N6L1 136 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 DDHD1Q8NEL9 900 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 LRTOMTQ8WZ04 291 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 CHFRQ96EP1 664 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 TRIM15Q9C019 465 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 ZCCHC2Q9C0B9 1178 aaKnown RBP13.32□□□□□ -0.28
CLK3-203ENST00000454830 HPS4Q9NQG7 708 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 ZIM2Q9NZV7 527 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 C6orf203Q9P0P8 240 aaPredicted RBP13.32□□□□□ -0.28
CLK3-203ENST00000454830 DKK3Q9UBP4 350 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 SCOCQ9UIL1 159 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 SLC27A6Q9Y2P4 619 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 CXorf51AA0A1B0GTR3 108 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 QSOX1O00391 747 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 ACOT8O14734 319 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 PCCBP05166 539 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 SLC6A2P23975 617 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 YBX1P67809 324 aaKnown RBP13.32□□□□□ -0.28
CLK3-203ENST00000454830 RCAN2Q14206 197 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 PDCD4Q53EL6 469 aaKnown RBP13.32□□□□□ -0.28
CLK3-203ENST00000454830 ATAT1Q5SQI0 421 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 EGFLAMQ63HQ2 1017 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 NEK5Q6P3R8 708 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 DTD2Q96FN9 168 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 MYOCQ99972 504 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 EBPLQ9BY08 206 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 CMTM6Q9NX76 183 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 TMEM181Q9P2C4 612 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 KANSL1LA0AUZ9 987 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 ARHGEF33A8MVX0 844 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 472.1 ms