RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 COMMD10Q9Y6G5 202 aa15.27■□□□□ 0.04
VCX3B-204ENST00000453306 KRT87PA6NCN2 255 aa15.26■□□□□ 0.03
VCX3B-204ENST00000453306 PDZK1P1A8MUH7 402 aa15.26■□□□□ 0.03
VCX3B-204ENST00000453306 VPS26AO75436 327 aa15.26■□□□□ 0.03
VCX3B-204ENST00000453306 VCLP18206 1134 aa15.26■□□□□ 0.03
VCX3B-204ENST00000453306 MLLT3P42568 568 aaPredicted RBP15.26■□□□□ 0.03
VCX3B-204ENST00000453306 MAGEA12P43365 314 aa15.26■□□□□ 0.03
VCX3B-204ENST00000453306 POU4F1Q01851 419 aa15.26■□□□□ 0.03
VCX3B-204ENST00000453306 DLG1Q12959 904 aa15.26■□□□□ 0.03
VCX3B-204ENST00000453306 RPA4Q13156 261 aa15.26■□□□□ 0.03
VCX3B-204ENST00000453306 USP10Q14694 798 aaKnown RBP15.26■□□□□ 0.03
VCX3B-204ENST00000453306 PLEKHS1Q5SXH7 462 aa15.26■□□□□ 0.03
VCX3B-204ENST00000453306 ARHGAP40Q5TG30 622 aa15.26■□□□□ 0.03
VCX3B-204ENST00000453306 FBXO38Q6PIJ6 1188 aa15.26■□□□□ 0.03
VCX3B-204ENST00000453306 PIWIL4Q7Z3Z4 852 aaKnown RBP15.26■□□□□ 0.03
VCX3B-204ENST00000453306 ZNF843Q8N446 348 aa15.26■□□□□ 0.03
VCX3B-204ENST00000453306 SPATA6LQ8N4H0 392 aa15.26■□□□□ 0.03
VCX3B-204ENST00000453306 ASZ1Q8WWH4 475 aa15.26■□□□□ 0.03
VCX3B-204ENST00000453306 DLG3Q92796 817 aa15.26■□□□□ 0.03
VCX3B-204ENST00000453306 CCDC68Q9H2F9 335 aa15.26■□□□□ 0.03
VCX3B-204ENST00000453306 ASCL3Q9NQ33 180 aa15.26■□□□□ 0.03
VCX3B-204ENST00000453306 TAS2R13Q9NYV9 303 aa15.26■□□□□ 0.03
VCX3B-204ENST00000453306 FETUBQ9UGM5 382 aa15.26■□□□□ 0.03
VCX3B-204ENST00000453306 DOLKQ9UPQ8 538 aa15.26■□□□□ 0.03
VCX3B-204ENST00000453306 PLAAQ9Y263 795 aa15.26■□□□□ 0.03
VCX3B-204ENST00000453306 PCDHGA8Q9Y5G5 932 aa15.26■□□□□ 0.03
VCX3B-204ENST00000453306 KLHL33A6NCF5 533 aa15.25■□□□□ 0.03
VCX3B-204ENST00000453306 TRIM49D1C9J1S8 452 aa15.25■□□□□ 0.03
VCX3B-204ENST00000453306 E5RI56 91 aa15.25■□□□□ 0.03
VCX3B-204ENST00000453306 RFPL1O75677 317 aa15.25■□□□□ 0.03
VCX3B-204ENST00000453306 APOA4P06727 396 aa15.25■□□□□ 0.03
VCX3B-204ENST00000453306 INHBAP08476 426 aa15.25■□□□□ 0.03
VCX3B-204ENST00000453306 SLC35E2BP0CK96 405 aa15.25■□□□□ 0.03
VCX3B-204ENST00000453306 XRCC1P18887 633 aaPredicted RBP15.25■□□□□ 0.03
VCX3B-204ENST00000453306 GRB7Q14451 532 aa15.25■□□□□ 0.03
VCX3B-204ENST00000453306 CCSMST1Q4G0I0 132 aa15.25■□□□□ 0.03
VCX3B-204ENST00000453306 C14orf28Q4W4Y0 310 aa15.25■□□□□ 0.03
VCX3B-204ENST00000453306 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.25■□□□□ 0.03
VCX3B-204ENST00000453306 ZNF761Q86XN6 746 aaPredicted RBP15.25■□□□□ 0.03
VCX3B-204ENST00000453306 TDRPQ86YL5 185 aa15.25■□□□□ 0.03
VCX3B-204ENST00000453306 LMNTD1Q8N9Z9 388 aa15.25■□□□□ 0.03
VCX3B-204ENST00000453306 JPH3Q8WXH2 748 aaPredicted RBP15.25■□□□□ 0.03
VCX3B-204ENST00000453306 ISL2Q96A47 359 aa15.25■□□□□ 0.03
VCX3B-204ENST00000453306 TMEM159Q96B96 161 aa15.25■□□□□ 0.03
VCX3B-204ENST00000453306 SLC46A1Q96NT5 459 aa15.25■□□□□ 0.03
VCX3B-204ENST00000453306 CPNE5Q9HCH3 593 aa15.25■□□□□ 0.03
VCX3B-204ENST00000453306 SNX15Q9NRS6 342 aa15.25■□□□□ 0.03
VCX3B-204ENST00000453306 TXNDC16Q9P2K2 825 aa15.25■□□□□ 0.03
VCX3B-204ENST00000453306 CPNE7Q9UBL6 633 aa15.25■□□□□ 0.03
VCX3B-204ENST00000453306 SLC24A2Q9UI40 661 aa15.25■□□□□ 0.03
VCX3B-204ENST00000453306 TRMT6Q9UJA5 497 aaKnown RBP15.25■□□□□ 0.03
VCX3B-204ENST00000453306 ENTPD2Q9Y5L3 495 aa15.25■□□□□ 0.03
VCX3B-204ENST00000453306 RNF215Q9Y6U7 377 aa15.25■□□□□ 0.03
VCX3B-204ENST00000453306 A0A1W2PPM1 405 aa15.24■□□□□ 0.03
VCX3B-204ENST00000453306 SMIM23A6NLE4 172 aa15.24■□□□□ 0.03
VCX3B-204ENST00000453306 MATN4O95460 622 aa15.24■□□□□ 0.03
VCX3B-204ENST00000453306 MTHFD1P11586 935 aaKnown RBP15.24■□□□□ 0.03
VCX3B-204ENST00000453306 PLA2G2AP14555 144 aa15.24■□□□□ 0.03
VCX3B-204ENST00000453306 SKIV2L2P42285 1042 aaKnown RBP15.24■□□□□ 0.03
VCX3B-204ENST00000453306 IRF9Q00978 393 aa15.24■□□□□ 0.03
VCX3B-204ENST00000453306 ZNF844Q08AG5 666 aa15.24■□□□□ 0.03
VCX3B-204ENST00000453306 VAC14Q08AM6 782 aa15.24■□□□□ 0.03
VCX3B-204ENST00000453306 MAP9Q49MG5 647 aa15.24■□□□□ 0.03
VCX3B-204ENST00000453306 PERM1Q5SV97 790 aa15.24■□□□□ 0.03
VCX3B-204ENST00000453306 SH2D5Q6ZV89 423 aa15.24■□□□□ 0.03
VCX3B-204ENST00000453306 ARL10Q8N8L6 244 aa15.24■□□□□ 0.03
VCX3B-204ENST00000453306 OR5AR1Q8NGP9 310 aa15.24■□□□□ 0.03
VCX3B-204ENST00000453306 WDR36Q8NI36 951 aaKnown RBP15.24■□□□□ 0.03
VCX3B-204ENST00000453306 TFGQ92734 400 aaPredicted RBP15.24■□□□□ 0.03
VCX3B-204ENST00000453306 C12orf66Q96MD2 445 aa15.24■□□□□ 0.03
VCX3B-204ENST00000453306 ZIM3Q96PE6 472 aa15.24■□□□□ 0.03
VCX3B-204ENST00000453306 TMEM109Q9BVC6 243 aa15.24■□□□□ 0.03
VCX3B-204ENST00000453306 UNKQ9C0B0 810 aaKnown RBP15.24■□□□□ 0.03
VCX3B-204ENST00000453306 SLC40A1Q9NP59 571 aa15.24■□□□□ 0.03
VCX3B-204ENST00000453306 TBK1Q9UHD2 729 aa15.24■□□□□ 0.03
VCX3B-204ENST00000453306 CIDEBQ9UHD4 219 aa15.24■□□□□ 0.03
VCX3B-204ENST00000453306 ADAMTS6Q9UKP5 1117 aa15.24■□□□□ 0.03
VCX3B-204ENST00000453306 PADI4Q9UM07 663 aa15.24■□□□□ 0.03
VCX3B-204ENST00000453306 TDRD6O60522 2096 aaKnown RBP15.23■□□□□ 0.03
VCX3B-204ENST00000453306 KALRNO60229 2985 aa15.23■□□□□ 0.03
VCX3B-204ENST00000453306 TMX2-CTNND1H3BSU7 103 aa15.23■□□□□ 0.03
VCX3B-204ENST00000453306 KPNA5O15131 536 aa15.23■□□□□ 0.03
VCX3B-204ENST00000453306 B4GAT1O43505 415 aa15.23■□□□□ 0.03
VCX3B-204ENST00000453306 C2P06681 752 aa15.23■□□□□ 0.03
VCX3B-204ENST00000453306 SLC35G4P0C7Q5 338 aa15.23■□□□□ 0.03
VCX3B-204ENST00000453306 ZNF37AP17032 561 aaPredicted RBP15.23■□□□□ 0.03
VCX3B-204ENST00000453306 ATP5DP30049 168 aa15.23■□□□□ 0.03
VCX3B-204ENST00000453306 KCNC1P48547 511 aa15.23■□□□□ 0.03
VCX3B-204ENST00000453306 SERPINB9P50453 376 aa15.23■□□□□ 0.03
VCX3B-204ENST00000453306 RAB10P61026 200 aa15.23■□□□□ 0.03
VCX3B-204ENST00000453306 SPIDRQ14159 915 aa15.23■□□□□ 0.03
VCX3B-204ENST00000453306 RASA2Q15283 850 aa15.23■□□□□ 0.03
VCX3B-204ENST00000453306 SYTL3Q4VX76 610 aa15.23■□□□□ 0.03
VCX3B-204ENST00000453306 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.23■□□□□ 0.03
VCX3B-204ENST00000453306 TIFABQ6ZNK6 161 aa15.23■□□□□ 0.03
VCX3B-204ENST00000453306 PLD6Q8N2A8 252 aaKnown RBP15.23■□□□□ 0.03
VCX3B-204ENST00000453306 CFAP61Q8NHU2 1237 aa15.23■□□□□ 0.03
VCX3B-204ENST00000453306 SNRNP27Q8WVK2 155 aaKnown RBP15.23■□□□□ 0.03
VCX3B-204ENST00000453306 ASB11Q8WXH4 323 aa15.23■□□□□ 0.03
VCX3B-204ENST00000453306 LINGO1Q96FE5 620 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms