RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 DAAM2Q86T65 1068 aa13.79□□□□□ -0.2
LYSMD3-202ENST00000453259 TFGQ92734 400 aaPredicted RBP13.79□□□□□ -0.2
LYSMD3-202ENST00000453259 LRRC45Q96CN5 670 aa13.79□□□□□ -0.2
LYSMD3-202ENST00000453259 QKIQ96PU8 341 aaKnown RBP eCLIP13.79□□□□□ -0.24e-7■■■■■ 40.2
LYSMD3-202ENST00000453259 SLX1AQ9BQ83 275 aa13.79□□□□□ -0.2
LYSMD3-202ENST00000453259 GBA3Q9H227 469 aa13.79□□□□□ -0.2
LYSMD3-202ENST00000453259 SLC26A1Q9H2B4 701 aa13.79□□□□□ -0.2
LYSMD3-202ENST00000453259 FAM8A1Q9UBU6 413 aa13.79□□□□□ -0.2
LYSMD3-202ENST00000453259 RSPH14Q9UHP6 348 aa13.79□□□□□ -0.2
LYSMD3-202ENST00000453259 AAR2Q9Y312 384 aaKnown RBP13.79□□□□□ -0.2
LYSMD3-202ENST00000453259 ARL5AQ9Y689 179 aa13.79□□□□□ -0.2
LYSMD3-202ENST00000453259 NUP210LQ5VU65 1888 aa13.78□□□□□ -0.2
LYSMD3-202ENST00000453259 APCP25054 2843 aa13.78□□□□□ -0.2
LYSMD3-202ENST00000453259 A0A0J9YY10 115 aa13.78□□□□□ -0.2
LYSMD3-202ENST00000453259 LIN7AO14910 233 aaPredicted RBP13.78□□□□□ -0.2
LYSMD3-202ENST00000453259 PSTPIP1O43586 416 aa13.78□□□□□ -0.2
LYSMD3-202ENST00000453259 BUD23O43709 281 aaKnown RBP13.78□□□□□ -0.2
LYSMD3-202ENST00000453259 CST8O60676 142 aa13.78□□□□□ -0.2
LYSMD3-202ENST00000453259 AP2A2O94973 939 aa13.78□□□□□ -0.2
LYSMD3-202ENST00000453259 UMODP07911 640 aa13.78□□□□□ -0.2
LYSMD3-202ENST00000453259 ITGAXP20702 1163 aa13.78□□□□□ -0.2
LYSMD3-202ENST00000453259 PTGER4P35408 488 aa13.78□□□□□ -0.2
LYSMD3-202ENST00000453259 UBASH3AP57075 661 aa13.78□□□□□ -0.2
LYSMD3-202ENST00000453259 FANCCQ00597 558 aa13.78□□□□□ -0.2
LYSMD3-202ENST00000453259 ART3Q13508 389 aa13.78□□□□□ -0.2
LYSMD3-202ENST00000453259 ZNF169Q14929 603 aaPredicted RBP13.78□□□□□ -0.2
LYSMD3-202ENST00000453259 IQCB1Q15051 598 aa13.78□□□□□ -0.2
LYSMD3-202ENST00000453259 TCEAL1Q15170 157 aa13.78□□□□□ -0.2
LYSMD3-202ENST00000453259 INAQ16352 499 aa13.78□□□□□ -0.2
LYSMD3-202ENST00000453259 ASTE1Q2TB18 679 aaPredicted RBP13.78□□□□□ -0.2
LYSMD3-202ENST00000453259 TFDP3Q5H9I0 405 aa13.78□□□□□ -0.2
LYSMD3-202ENST00000453259 FAM180AQ6UWF9 173 aa13.78□□□□□ -0.2
LYSMD3-202ENST00000453259 MFSD7Q6UXD7 560 aa13.78□□□□□ -0.2
LYSMD3-202ENST00000453259 RANBP10Q6VN20 620 aa13.78□□□□□ -0.2
LYSMD3-202ENST00000453259 GRHL3Q8TE85 626 aa13.78□□□□□ -0.2
LYSMD3-202ENST00000453259 CPLX3Q8WVH0 158 aa13.78□□□□□ -0.2
LYSMD3-202ENST00000453259 RNF25Q96BH1 459 aaPredicted RBP13.78□□□□□ -0.2
LYSMD3-202ENST00000453259 PACSIN1Q9BY11 444 aa13.78□□□□□ -0.2
LYSMD3-202ENST00000453259 DEF6Q9H4E7 631 aa13.78□□□□□ -0.2
LYSMD3-202ENST00000453259 ENAMQ9NRM1 1142 aa13.78□□□□□ -0.2
LYSMD3-202ENST00000453259 ZDHHC3Q9NYG2 299 aa13.78□□□□□ -0.2
LYSMD3-202ENST00000453259 IL1RAPL1Q9NZN1 696 aa13.78□□□□□ -0.2
LYSMD3-202ENST00000453259 FKBPLQ9UIM3 349 aa13.78□□□□□ -0.2
LYSMD3-202ENST00000453259 PLCL2Q9UPR0 1127 aa13.78□□□□□ -0.2
LYSMD3-202ENST00000453259 OSGIN2Q9Y236 505 aa13.78□□□□□ -0.2
LYSMD3-202ENST00000453259 TRBV5-4A0A0C4DH59 114 aa13.77□□□□□ -0.21
LYSMD3-202ENST00000453259 DDX3YO15523 660 aaKnown RBP13.77□□□□□ -0.21
LYSMD3-202ENST00000453259 TPM3P06753 285 aa13.77□□□□□ -0.21
LYSMD3-202ENST00000453259 PVRP15151 417 aa13.77□□□□□ -0.21
LYSMD3-202ENST00000453259 UGT2B7P16662 529 aa13.77□□□□□ -0.21
LYSMD3-202ENST00000453259 FBN2P35556 2912 aa13.77□□□□□ -0.21
LYSMD3-202ENST00000453259 KIR2DS3Q14952 304 aa13.77□□□□□ -0.21
LYSMD3-202ENST00000453259 MTFR2Q6P444 385 aa13.77□□□□□ -0.21
LYSMD3-202ENST00000453259 TBC1D21Q8IYX1 336 aa13.77□□□□□ -0.21
LYSMD3-202ENST00000453259 LILRA3Q8N6C8 439 aaPredicted RBP13.77□□□□□ -0.21
LYSMD3-202ENST00000453259 BCORP1Q8N888 145 aa13.77□□□□□ -0.21
LYSMD3-202ENST00000453259 DNAJB14Q8TBM8 379 aa13.77□□□□□ -0.21
LYSMD3-202ENST00000453259 RELTQ969Z4 430 aa13.77□□□□□ -0.21
LYSMD3-202ENST00000453259 OR2A14Q96R47 310 aa13.77□□□□□ -0.21
LYSMD3-202ENST00000453259 TRIM56Q9BRZ2 755 aaKnown RBP13.77□□□□□ -0.21
LYSMD3-202ENST00000453259 HGH1Q9BTY7 390 aa13.77□□□□□ -0.21
LYSMD3-202ENST00000453259 LHPPQ9H008 270 aa13.77□□□□□ -0.21
LYSMD3-202ENST00000453259 FAM60AQ9NP50 221 aa13.77□□□□□ -0.21
LYSMD3-202ENST00000453259 SAE1Q9UBE0 346 aaPredicted RBP13.77□□□□□ -0.21
LYSMD3-202ENST00000453259 FBXL4Q9UKA2 621 aa13.77□□□□□ -0.21
LYSMD3-202ENST00000453259 ICKQ9UPZ9 632 aa13.77□□□□□ -0.21
LYSMD3-202ENST00000453259 CDYLQ9Y232 598 aa13.77□□□□□ -0.21
LYSMD3-202ENST00000453259 GTF3C3Q9Y5Q9 886 aa13.77□□□□□ -0.21
LYSMD3-202ENST00000453259 A0A1B0GX78 115 aa13.76□□□□□ -0.21
LYSMD3-202ENST00000453259 H7C0S8 307 aa13.76□□□□□ -0.21
LYSMD3-202ENST00000453259 SPOPO43791 374 aa13.76□□□□□ -0.21
LYSMD3-202ENST00000453259 AKR1B10O60218 316 aa13.76□□□□□ -0.21
LYSMD3-202ENST00000453259 CHRM5P08912 532 aaPredicted RBP13.76□□□□□ -0.21
LYSMD3-202ENST00000453259 PECAM1P16284 738 aaPredicted RBP13.76□□□□□ -0.21
LYSMD3-202ENST00000453259 POU3F2P20265 443 aaPredicted RBP13.76□□□□□ -0.21
LYSMD3-202ENST00000453259 ADRA1AP35348 466 aa13.76□□□□□ -0.21
LYSMD3-202ENST00000453259 GCGRP47871 477 aa13.76□□□□□ -0.21
LYSMD3-202ENST00000453259 ZNF140P52738 457 aaPredicted RBP13.76□□□□□ -0.21
LYSMD3-202ENST00000453259 OTUD4Q01804 1114 aaKnown RBP13.76□□□□□ -0.21
LYSMD3-202ENST00000453259 CDC16Q13042 620 aa13.76□□□□□ -0.21
LYSMD3-202ENST00000453259 TRIM14Q14142 442 aa13.76□□□□□ -0.21
LYSMD3-202ENST00000453259 PRPSAP1Q14558 356 aa13.76□□□□□ -0.21
LYSMD3-202ENST00000453259 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.76□□□□□ -0.21
LYSMD3-202ENST00000453259 C1orf189Q5VU69 101 aa13.76□□□□□ -0.21
LYSMD3-202ENST00000453259 SP5Q6BEB4 398 aaPredicted RBP13.76□□□□□ -0.21
LYSMD3-202ENST00000453259 ZC3H18Q86VM9 953 aaKnown RBP13.76□□□□□ -0.21
LYSMD3-202ENST00000453259 MCEMP1Q8IX19 187 aa13.76□□□□□ -0.21
LYSMD3-202ENST00000453259 LMF1Q96S06 567 aa13.76□□□□□ -0.21
LYSMD3-202ENST00000453259 DNAJC7Q99615 494 aa13.76□□□□□ -0.21
LYSMD3-202ENST00000453259 FICDQ9BVA6 458 aa13.76□□□□□ -0.21
LYSMD3-202ENST00000453259 ARNT2Q9HBZ2 717 aa13.76□□□□□ -0.21
LYSMD3-202ENST00000453259 ZBTB20Q9HC78 741 aaPredicted RBP13.76□□□□□ -0.21
LYSMD3-202ENST00000453259 SLC6A20Q9NP91 592 aa13.76□□□□□ -0.21
LYSMD3-202ENST00000453259 CHST11Q9NPF2 352 aa13.76□□□□□ -0.21
LYSMD3-202ENST00000453259 LUC7LQ9NQ29 371 aaKnown RBP13.76□□□□□ -0.21
LYSMD3-202ENST00000453259 SEMA3GQ9NS98 782 aa13.76□□□□□ -0.21
LYSMD3-202ENST00000453259 ZNHIT6Q9NWK9 470 aaKnown RBP13.76□□□□□ -0.21
LYSMD3-202ENST00000453259 COPG2Q9UBF2 871 aa13.76□□□□□ -0.21
LYSMD3-202ENST00000453259 DHCR7Q9UBM7 475 aaKnown RBP13.76□□□□□ -0.21
LYSMD3-202ENST00000453259 INTUQ9ULD6 942 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms