RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 OSBPL8Q9BZF1 889 aa11.29□□□□□ -0.6
GARNL3-210ENST00000453030 FAM60AQ9NP50 221 aa11.29□□□□□ -0.6
GARNL3-210ENST00000453030 CUEDC1Q9NWM3 386 aaPredicted RBP11.29□□□□□ -0.6
GARNL3-210ENST00000453030 PIH1D1Q9NWS0 290 aaKnown RBP11.29□□□□□ -0.6
GARNL3-210ENST00000453030 SMARCAL1Q9NZC9 954 aa11.29□□□□□ -0.6
GARNL3-210ENST00000453030 DHCR7Q9UBM7 475 aaKnown RBP11.29□□□□□ -0.6
GARNL3-210ENST00000453030 GPN3Q9UHW5 284 aaPredicted RBP11.29□□□□□ -0.6
GARNL3-210ENST00000453030 CDYLQ9Y232 598 aa11.29□□□□□ -0.6
GARNL3-210ENST00000453030 ASF1AQ9Y294 204 aa11.29□□□□□ -0.6
GARNL3-210ENST00000453030 TDRKHQ9Y2W6 561 aaKnown RBP11.29□□□□□ -0.6
GARNL3-210ENST00000453030 PTRH2Q9Y3E5 179 aaKnown RBP11.29□□□□□ -0.6
GARNL3-210ENST00000453030 PCDHA13Q9Y5I0 950 aa11.29□□□□□ -0.6
GARNL3-210ENST00000453030 CROCCQ5TZA2 2017 aa11.28□□□□□ -0.6
GARNL3-210ENST00000453030 POLEQ07864 2286 aa11.28□□□□□ -0.6
GARNL3-210ENST00000453030 CSMD1Q96PZ7 3565 aa11.28□□□□□ -0.6
GARNL3-210ENST00000453030 TRBV5-4A0A0C4DH59 114 aa11.28□□□□□ -0.6
GARNL3-210ENST00000453030 MASP2O00187 686 aa11.28□□□□□ -0.6
GARNL3-210ENST00000453030 ZSCAN9O15535 394 aaPredicted RBP11.28□□□□□ -0.6
GARNL3-210ENST00000453030 KLF7O75840 302 aaPredicted RBP11.28□□□□□ -0.6
GARNL3-210ENST00000453030 CTSBP07858 339 aa11.28□□□□□ -0.6
GARNL3-210ENST00000453030 TPH1P17752 444 aa11.28□□□□□ -0.6
GARNL3-210ENST00000453030 SHMT2P34897 504 aa11.28□□□□□ -0.6
GARNL3-210ENST00000453030 CD151P48509 253 aa11.28□□□□□ -0.6
GARNL3-210ENST00000453030 COPS2P61201 443 aa11.28□□□□□ -0.6
GARNL3-210ENST00000453030 RPA4Q13156 261 aa11.28□□□□□ -0.6
GARNL3-210ENST00000453030 TBX2Q13207 712 aaPredicted RBP11.28□□□□□ -0.6
GARNL3-210ENST00000453030 SPA17Q15506 151 aa11.28□□□□□ -0.6
GARNL3-210ENST00000453030 ZIC1Q15915 447 aa11.28□□□□□ -0.6
GARNL3-210ENST00000453030 DBN1Q16643 649 aa11.28□□□□□ -0.6
GARNL3-210ENST00000453030 SYTL3Q4VX76 610 aa11.28□□□□□ -0.6
GARNL3-210ENST00000453030 NAPRTQ6XQN6 538 aa11.28□□□□□ -0.6
GARNL3-210ENST00000453030 PIANPQ8IYJ0 282 aa11.28□□□□□ -0.6
GARNL3-210ENST00000453030 IQCKQ8N0W5 287 aa11.28□□□□□ -0.6
GARNL3-210ENST00000453030 TAB3Q8N5C8 712 aaPredicted RBP11.28□□□□□ -0.6
GARNL3-210ENST00000453030 ZNF655Q8N720 491 aaPredicted RBP11.28□□□□□ -0.6
GARNL3-210ENST00000453030 TC2NQ8N9U0 490 aa11.28□□□□□ -0.6
GARNL3-210ENST00000453030 CLEC1AQ8NC01 280 aa11.28□□□□□ -0.6
GARNL3-210ENST00000453030 ELMO1Q92556 727 aa11.28□□□□□ -0.6
GARNL3-210ENST00000453030 SNRNP40Q96DI7 357 aaKnown RBP11.28□□□□□ -0.6
GARNL3-210ENST00000453030 SPRTNQ9H040 489 aaPredicted RBP11.28□□□□□ -0.6
GARNL3-210ENST00000453030 TSPY26PQ9H489 355 aa11.28□□□□□ -0.6
GARNL3-210ENST00000453030 TXLNGQ9NUQ3 528 aa11.28□□□□□ -0.6
GARNL3-210ENST00000453030 ASF1BQ9NVP2 202 aa11.28□□□□□ -0.6
GARNL3-210ENST00000453030 SPHK1Q9NYA1 384 aa11.28□□□□□ -0.6
GARNL3-210ENST00000453030 IFT80Q9P2H3 777 aaPredicted RBP11.28□□□□□ -0.6
GARNL3-210ENST00000453030 NDOR1Q9UHB4 597 aa11.28□□□□□ -0.6
GARNL3-210ENST00000453030 FEZ2Q9UHY8 353 aaPredicted RBP11.28□□□□□ -0.6
GARNL3-210ENST00000453030 PLAGL1Q9UM63 463 aa11.28□□□□□ -0.6
GARNL3-210ENST00000453030 A0A0J9YY10 115 aa11.27□□□□□ -0.61
GARNL3-210ENST00000453030 OR51F1A6NGY5 319 aa11.27□□□□□ -0.61
GARNL3-210ENST00000453030 PEX12O00623 359 aa11.27□□□□□ -0.61
GARNL3-210ENST00000453030 ALPPP05187 535 aa11.27□□□□□ -0.61
GARNL3-210ENST00000453030 CHRM5P08912 532 aaPredicted RBP11.27□□□□□ -0.61
GARNL3-210ENST00000453030 COL8A1P27658 744 aa11.27□□□□□ -0.61
GARNL3-210ENST00000453030 NAP1L1P55209 391 aaKnown RBP11.27□□□□□ -0.61
GARNL3-210ENST00000453030 CACNG1Q06432 222 aa11.27□□□□□ -0.61
GARNL3-210ENST00000453030 PLEKHN1Q494U1 663 aaPredicted RBP11.27□□□□□ -0.61
GARNL3-210ENST00000453030 DCAF10Q5QP82 559 aa11.27□□□□□ -0.61
GARNL3-210ENST00000453030 LYPLAL1Q5VWZ2 237 aa11.27□□□□□ -0.61
GARNL3-210ENST00000453030 ZNF787Q6DD87 383 aa11.27□□□□□ -0.61
GARNL3-210ENST00000453030 RHBDD2Q6NTF9 364 aa11.27□□□□□ -0.61
GARNL3-210ENST00000453030 UNC5AQ6ZN44 842 aa11.27□□□□□ -0.61
GARNL3-210ENST00000453030 ARHGEF18Q6ZSZ5 1173 aa11.27□□□□□ -0.61
GARNL3-210ENST00000453030 TMEM151BQ8IW70 566 aa11.27□□□□□ -0.61
GARNL3-210ENST00000453030 GALNT16Q8N428 558 aa11.27□□□□□ -0.61
GARNL3-210ENST00000453030 CISD2Q8N5K1 135 aaKnown RBP11.27□□□□□ -0.61
GARNL3-210ENST00000453030 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.27□□□□□ -0.61
GARNL3-210ENST00000453030 TCTN2Q96GX1 697 aa11.27□□□□□ -0.61
GARNL3-210ENST00000453030 FER1L6-AS2Q96M78 137 aa11.27□□□□□ -0.61
GARNL3-210ENST00000453030 GBP5Q96PP8 586 aa11.27□□□□□ -0.61
GARNL3-210ENST00000453030 PPP1R2P1Q96PQ5 205 aa11.27□□□□□ -0.61
GARNL3-210ENST00000453030 OR2A14Q96R47 310 aa11.27□□□□□ -0.61
GARNL3-210ENST00000453030 C17orf62Q9BQA9 187 aa11.27□□□□□ -0.61
GARNL3-210ENST00000453030 ILKAPQ9H0C8 392 aaPredicted RBP11.27□□□□□ -0.61
GARNL3-210ENST00000453030 LUC7LQ9NQ29 371 aaKnown RBP11.27□□□□□ -0.61
GARNL3-210ENST00000453030 NLE1Q9NVX2 485 aaPredicted RBP11.27□□□□□ -0.61
GARNL3-210ENST00000453030 ERRFI1Q9UJM3 462 aaPredicted RBP11.27□□□□□ -0.61
GARNL3-210ENST00000453030 B3GNT3Q9Y2A9 372 aa11.27□□□□□ -0.61
GARNL3-210ENST00000453030 PCDHA3Q9Y5H8 950 aa11.27□□□□□ -0.61
GARNL3-210ENST00000453030 PRSS21Q9Y6M0 314 aa11.27□□□□□ -0.61
GARNL3-210ENST00000453030 AP1M2Q9Y6Q5 423 aa11.27□□□□□ -0.61
GARNL3-210ENST00000453030 ABCA12Q86UK0 2595 aa11.26□□□□□ -0.61
GARNL3-210ENST00000453030 H3BMH7 237 aa11.26□□□□□ -0.61
GARNL3-210ENST00000453030 H7C0S8 307 aa11.26□□□□□ -0.61
GARNL3-210ENST00000453030 LIN7AO14910 233 aaPredicted RBP11.26□□□□□ -0.61
GARNL3-210ENST00000453030 CNOT3O75175 753 aaKnown RBP11.26□□□□□ -0.61
GARNL3-210ENST00000453030 TJP3O95049 919 aa11.26□□□□□ -0.61
GARNL3-210ENST00000453030 DDAH2O95865 285 aa11.26□□□□□ -0.61
GARNL3-210ENST00000453030 FTH1P02794 183 aa11.26□□□□□ -0.61
GARNL3-210ENST00000453030 PTMAP06454 111 aaKnown RBP11.26□□□□□ -0.61
GARNL3-210ENST00000453030 MSNP26038 577 aaKnown RBP11.26□□□□□ -0.61
GARNL3-210ENST00000453030 VARSP26640 1264 aaKnown RBP11.26□□□□□ -0.61
GARNL3-210ENST00000453030 PEBP1P30086 187 aaKnown RBP11.26□□□□□ -0.61
GARNL3-210ENST00000453030 PTPN7P35236 360 aa11.26□□□□□ -0.61
GARNL3-210ENST00000453030 CYLC1P35663 651 aaPredicted RBP11.26□□□□□ -0.61
GARNL3-210ENST00000453030 GABRA4P48169 554 aa11.26□□□□□ -0.61
GARNL3-210ENST00000453030 CSE1LP55060 971 aaKnown RBP11.26□□□□□ -0.61
GARNL3-210ENST00000453030 RWDD2BP57060 319 aa11.26□□□□□ -0.61
GARNL3-210ENST00000453030 DCDP81605 110 aaKnown RBP11.26□□□□□ -0.61
GARNL3-210ENST00000453030 SSPNQ14714 243 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms