RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 PABPN1LA6NDY0 278 aaKnown RBP18.76■□□□□ 0.59
RPS28-202ENST00000449223 NCF1BA6NI72 391 aaPredicted RBP18.76■□□□□ 0.59
RPS28-202ENST00000449223 NCF1CA8MVU1 366 aaPredicted RBP18.76■□□□□ 0.59
RPS28-202ENST00000449223 TCP11X1B4DZS4 312 aa18.76■□□□□ 0.59
RPS28-202ENST00000449223 TAPBPO15533 448 aa18.76■□□□□ 0.59
RPS28-202ENST00000449223 ERGP11308 486 aa18.76■□□□□ 0.59
RPS28-202ENST00000449223 CTSEP14091 401 aa18.76■□□□□ 0.59
RPS28-202ENST00000449223 NCF1P14598 390 aaPredicted RBP18.76■□□□□ 0.59
RPS28-202ENST00000449223 HALP42357 657 aa18.76■□□□□ 0.59
RPS28-202ENST00000449223 STX3Q13277 289 aa18.76■□□□□ 0.59
RPS28-202ENST00000449223 SIM2Q14190 667 aaPredicted RBP18.76■□□□□ 0.59
RPS28-202ENST00000449223 GRB7Q14451 532 aa18.76■□□□□ 0.59
RPS28-202ENST00000449223 ELOCQ15369 112 aa18.76■□□□□ 0.59
RPS28-202ENST00000449223 FRMD7Q6ZUT3 714 aa18.76■□□□□ 0.59
RPS28-202ENST00000449223 SDK1Q7Z5N4 2213 aa18.76■□□□□ 0.59
RPS28-202ENST00000449223 KLHDC8AQ8IYD2 350 aa18.76■□□□□ 0.59
RPS28-202ENST00000449223 CFAP61Q8NHU2 1237 aa18.76■□□□□ 0.59
RPS28-202ENST00000449223 PPP1R14CQ8TAE6 165 aa18.76■□□□□ 0.59
RPS28-202ENST00000449223 ATL1Q8WXF7 558 aa18.76■□□□□ 0.59
RPS28-202ENST00000449223 RAD51AP1Q96B01 352 aa18.76■□□□□ 0.59
RPS28-202ENST00000449223 CHMP6Q96FZ7 201 aa18.76■□□□□ 0.59
RPS28-202ENST00000449223 CNDP1Q96KN2 507 aa18.76■□□□□ 0.59
RPS28-202ENST00000449223 C12orf66Q96MD2 445 aa18.76■□□□□ 0.59
RPS28-202ENST00000449223 ATXN2Q99700 1313 aaKnown RBP18.76■□□□□ 0.59
RPS28-202ENST00000449223 EGFL8Q99944 293 aa18.76■□□□□ 0.59
RPS28-202ENST00000449223 TMEM79Q9BSE2 394 aa18.76■□□□□ 0.59
RPS28-202ENST00000449223 MVB12BQ9H7P6 319 aa18.76■□□□□ 0.59
RPS28-202ENST00000449223 WDFY4Q6ZS81 3184 aa18.75■□□□□ 0.59
RPS28-202ENST00000449223 A0A1B0GVT2 93 aa18.75■□□□□ 0.59
RPS28-202ENST00000449223 PDZK1P1A8MUH7 402 aa18.75■□□□□ 0.59
RPS28-202ENST00000449223 SCAMP1O15126 338 aa18.75■□□□□ 0.59
RPS28-202ENST00000449223 GUCA1CO95843 209 aa18.75■□□□□ 0.59
RPS28-202ENST00000449223 MTHFD1P11586 935 aaKnown RBP18.75■□□□□ 0.59
RPS28-202ENST00000449223 NDUFS1P28331 727 aa18.75■□□□□ 0.59
RPS28-202ENST00000449223 ARRB2P32121 409 aa18.75■□□□□ 0.59
RPS28-202ENST00000449223 BDKRB1P46663 353 aa18.75■□□□□ 0.59
RPS28-202ENST00000449223 RCN2Q14257 317 aa18.75■□□□□ 0.59
RPS28-202ENST00000449223 RPE65Q16518 533 aa18.75■□□□□ 0.59
RPS28-202ENST00000449223 ZXDCQ2QGD7 858 aaPredicted RBP18.75■□□□□ 0.59
RPS28-202ENST00000449223 UNC50Q53HI1 259 aa18.75■□□□□ 0.59
RPS28-202ENST00000449223 ZNF542PQ5EBM4 170 aa18.75■□□□□ 0.59
RPS28-202ENST00000449223 PRRT3Q5FWE3 981 aa18.75■□□□□ 0.59
RPS28-202ENST00000449223 SLC30A9Q6PML9 568 aa18.75■□□□□ 0.59
RPS28-202ENST00000449223 OR5AR1Q8NGP9 310 aa18.75■□□□□ 0.59
RPS28-202ENST00000449223 OR9A1PQ8NGU1 263 aa18.75■□□□□ 0.59
RPS28-202ENST00000449223 CEP76Q8TAP6 659 aa18.75■□□□□ 0.59
RPS28-202ENST00000449223 LOXL4Q96JB6 756 aa18.75■□□□□ 0.59
RPS28-202ENST00000449223 TRIT1Q9H3H1 467 aaKnown RBP18.75■□□□□ 0.59
RPS28-202ENST00000449223 GSTO2Q9H4Y5 243 aa18.75■□□□□ 0.59
RPS28-202ENST00000449223 SCHIP1Q9P0W5 487 aaPredicted RBP18.75■□□□□ 0.59
RPS28-202ENST00000449223 TAAR2Q9P1P5 351 aa18.75■□□□□ 0.59
RPS28-202ENST00000449223 POLG2Q9UHN1 485 aa18.75■□□□□ 0.59
RPS28-202ENST00000449223 HAO1Q9UJM8 370 aa18.75■□□□□ 0.59
RPS28-202ENST00000449223 PCTPQ9UKL6 214 aa18.75■□□□□ 0.59
RPS28-202ENST00000449223 TDRD6O60522 2096 aaKnown RBP18.75■□□□□ 0.59
RPS28-202ENST00000449223 DNAH14Q0VDD8 3507 aa18.75■□□□□ 0.59
RPS28-202ENST00000449223 GMNCA6NCL1 334 aa18.74■□□□□ 0.59
RPS28-202ENST00000449223 OR5K4A6NMS3 321 aa18.74■□□□□ 0.59
RPS28-202ENST00000449223 E2F3O00716 465 aa18.74■□□□□ 0.59
RPS28-202ENST00000449223 EDF1O60869 148 aaKnown RBP18.74■□□□□ 0.59
RPS28-202ENST00000449223 SIX3O95343 332 aaPredicted RBP18.74■□□□□ 0.59
RPS28-202ENST00000449223 EML2O95834 649 aa18.74■□□□□ 0.59
RPS28-202ENST00000449223 EEF1DP29692 281 aaKnown RBP18.74■□□□□ 0.59
RPS28-202ENST00000449223 SLC6A12P48065 614 aa18.74■□□□□ 0.59
RPS28-202ENST00000449223 RXRGP48443 463 aa18.74■□□□□ 0.59
RPS28-202ENST00000449223 AGTR2P50052 363 aa18.74■□□□□ 0.59
RPS28-202ENST00000449223 ABCE1P61221 599 aaKnown RBP18.74■□□□□ 0.59
RPS28-202ENST00000449223 BNC1Q01954 994 aa18.74■□□□□ 0.59
RPS28-202ENST00000449223 ARHGAP19Q14CB8 494 aa18.74■□□□□ 0.59
RPS28-202ENST00000449223 CCSMST1Q4G0I0 132 aa18.74■□□□□ 0.59
RPS28-202ENST00000449223 ANKS6Q68DC2 871 aa18.74■□□□□ 0.59
RPS28-202ENST00000449223 MBOAT1Q6ZNC8 495 aa18.74■□□□□ 0.59
RPS28-202ENST00000449223 ZNF483Q8TF39 744 aaPredicted RBP18.74■□□□□ 0.59
RPS28-202ENST00000449223 PKP4Q99569 1192 aa18.74■□□□□ 0.59
RPS28-202ENST00000449223 MENTQ9BUN1 341 aa18.74■□□□□ 0.59
RPS28-202ENST00000449223 CD244Q9BZW8 370 aa18.74■□□□□ 0.59
RPS28-202ENST00000449223 C20orf27Q9GZN8 174 aa18.74■□□□□ 0.59
RPS28-202ENST00000449223 EPN3Q9H201 632 aa18.74■□□□□ 0.59
RPS28-202ENST00000449223 SLCO1B3Q9NPD5 702 aa18.74■□□□□ 0.59
RPS28-202ENST00000449223 STOX2Q9P2F5 926 aaPredicted RBP18.74■□□□□ 0.59
RPS28-202ENST00000449223 SPASTQ9UBP0 616 aa18.74■□□□□ 0.59
RPS28-202ENST00000449223 TMEM131Q92545 1883 aa18.74■□□□□ 0.59
RPS28-202ENST00000449223 SLC16A8O95907 504 aa18.74■□□□□ 0.59
RPS28-202ENST00000449223 CELA2BP08218 269 aaPredicted RBP18.74■□□□□ 0.59
RPS28-202ENST00000449223 SLC2A4P14672 509 aa18.74■□□□□ 0.59
RPS28-202ENST00000449223 IMPA1P29218 277 aa18.74■□□□□ 0.59
RPS28-202ENST00000449223 HSD17B2P37059 387 aa18.74■□□□□ 0.59
RPS28-202ENST00000449223 SLC1A6P48664 564 aa18.74■□□□□ 0.59
RPS28-202ENST00000449223 CBX1P83916 185 aa18.74■□□□□ 0.59
RPS28-202ENST00000449223 KIF19Q2TAC6 998 aa18.74■□□□□ 0.59
RPS28-202ENST00000449223 CFAP157Q5JU67 520 aa18.74■□□□□ 0.59
RPS28-202ENST00000449223 IYDQ6PHW0 289 aa18.74■□□□□ 0.59
RPS28-202ENST00000449223 ATG14Q6ZNE5 492 aa18.74■□□□□ 0.59
RPS28-202ENST00000449223 PHC3Q8NDX5 983 aa18.74■□□□□ 0.59
RPS28-202ENST00000449223 ZFPM2Q8WW38 1151 aa18.74■□□□□ 0.59
RPS28-202ENST00000449223 SORT1Q99523 831 aa18.74■□□□□ 0.59
RPS28-202ENST00000449223 WWOXQ9NZC7 414 aa18.74■□□□□ 0.59
RPS28-202ENST00000449223 SPATA7Q9P0W8 599 aa18.74■□□□□ 0.59
RPS28-202ENST00000449223 PCDH15Q96QU1 1955 aa18.73■□□□□ 0.59
RPS28-202ENST00000449223 VPS13AQ96RL7 3174 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms