RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 ESR1P03372 595 aa14.16□□□□□ -0.14
USP39-206ENST00000448971 F7P08709 466 aaPredicted RBP14.16□□□□□ -0.14
USP39-206ENST00000448971 ANKRD34CP0C6C1 535 aa14.16□□□□□ -0.14
USP39-206ENST00000448971 RPL21P46778 160 aaKnown RBP14.16□□□□□ -0.14
USP39-206ENST00000448971 SEPHS1P49903 392 aa14.16□□□□□ -0.14
USP39-206ENST00000448971 PPP1CAP62136 330 aa14.16□□□□□ -0.14
USP39-206ENST00000448971 PRKG2Q13237 762 aa14.16□□□□□ -0.14
USP39-206ENST00000448971 MSS51Q4VC12 460 aa14.16□□□□□ -0.14
USP39-206ENST00000448971 SPANXN3Q5MJ09 141 aa14.16□□□□□ -0.14
USP39-206ENST00000448971 CTSL3PQ5NE16 218 aa14.16□□□□□ -0.14
USP39-206ENST00000448971 DNTTIP2Q5QJE6 756 aaKnown RBP14.16□□□□□ -0.14
USP39-206ENST00000448971 OTOAQ7RTW8 1153 aa14.16□□□□□ -0.14
USP39-206ENST00000448971 DENND6AQ8IWF6 608 aa14.16□□□□□ -0.14
USP39-206ENST00000448971 LMNTD2Q8IXW0 634 aa14.16□□□□□ -0.14
USP39-206ENST00000448971 BBOF1Q8ND07 529 aa14.16□□□□□ -0.14
USP39-206ENST00000448971 PHC3Q8NDX5 983 aa14.16□□□□□ -0.14
USP39-206ENST00000448971 OR52E1Q8NGJ3 308 aa14.16□□□□□ -0.14
USP39-206ENST00000448971 OR5AR1Q8NGP9 310 aa14.16□□□□□ -0.14
USP39-206ENST00000448971 GABPB2Q8TAK5 448 aaPredicted RBP14.16□□□□□ -0.14
USP39-206ENST00000448971 SKA2Q8WVK7 121 aaPredicted RBP14.16□□□□□ -0.14
USP39-206ENST00000448971 ZFPM2Q8WW38 1151 aa14.16□□□□□ -0.14
USP39-206ENST00000448971 LCN9Q8WX39 176 aa14.16□□□□□ -0.14
USP39-206ENST00000448971 ART4Q93070 314 aa14.16□□□□□ -0.14
USP39-206ENST00000448971 FAM136AQ96C01 138 aa14.16□□□□□ -0.14
USP39-206ENST00000448971 CFAP36Q96G28 342 aa14.16□□□□□ -0.14
USP39-206ENST00000448971 PWWP2AQ96N64 755 aa14.16□□□□□ -0.14
USP39-206ENST00000448971 EBNA1BP2Q99848 306 aaKnown RBP14.16□□□□□ -0.14
USP39-206ENST00000448971 NAT9Q9BTE0 207 aa14.16□□□□□ -0.14
USP39-206ENST00000448971 B3GNT4Q9C0J1 378 aa14.16□□□□□ -0.14
USP39-206ENST00000448971 TRIT1Q9H3H1 467 aaKnown RBP14.16□□□□□ -0.14
USP39-206ENST00000448971 SRMSQ9H3Y6 488 aa14.16□□□□□ -0.14
USP39-206ENST00000448971 FBXO6Q9NRD1 293 aaPredicted RBP14.16□□□□□ -0.14
USP39-206ENST00000448971 INTS10Q9NVR2 710 aaKnown RBP14.16□□□□□ -0.14
USP39-206ENST00000448971 HRASLS2Q9NWW9 162 aa14.16□□□□□ -0.14
USP39-206ENST00000448971 PDP2Q9P2J9 529 aa14.16□□□□□ -0.14
USP39-206ENST00000448971 TSR3Q9UJK0 312 aaKnown RBP14.16□□□□□ -0.14
USP39-206ENST00000448971 GSAPA4D1B5 854 aa14.15□□□□□ -0.14
USP39-206ENST00000448971 OR6C74A6NCV1 312 aa14.15□□□□□ -0.14
USP39-206ENST00000448971 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.15□□□□□ -0.14
USP39-206ENST00000448971 KPNA5O15131 536 aa14.15□□□□□ -0.14
USP39-206ENST00000448971 KDM1AO60341 852 aa14.15□□□□□ -0.14
USP39-206ENST00000448971 NIPSNAP2O75323 286 aa14.15□□□□□ -0.14
USP39-206ENST00000448971 RAB15P59190 212 aa14.15□□□□□ -0.14
USP39-206ENST00000448971 CTBP1Q13363 440 aa14.15□□□□□ -0.14
USP39-206ENST00000448971 HSP90AA5PQ58FG0 334 aa14.15□□□□□ -0.14
USP39-206ENST00000448971 HP1BP3Q5SSJ5 553 aaPredicted RBP14.15□□□□□ -0.14
USP39-206ENST00000448971 CACHD1Q5VU97 1274 aa14.15□□□□□ -0.14
USP39-206ENST00000448971 CENPUQ71F23 418 aa14.15□□□□□ -0.14
USP39-206ENST00000448971 PRSS42Q7Z5A4 293 aa14.15□□□□□ -0.14
USP39-206ENST00000448971 ARHGAP22Q7Z5H3 698 aa14.15□□□□□ -0.14
USP39-206ENST00000448971 SLC22A15Q8IZD6 547 aa14.15□□□□□ -0.14
USP39-206ENST00000448971 OR4E2Q8NGC2 313 aa14.15□□□□□ -0.14
USP39-206ENST00000448971 CFAP61Q8NHU2 1237 aa14.15□□□□□ -0.14
USP39-206ENST00000448971 RAB33BQ9H082 229 aa14.15□□□□□ -0.14
USP39-206ENST00000448971 ZNF768Q9H5H4 540 aaKnown RBP14.15□□□□□ -0.14
USP39-206ENST00000448971 PPANQ9NQ55 473 aaKnown RBP14.15□□□□□ -0.14
USP39-206ENST00000448971 IARS2Q9NSE4 1012 aaKnown RBP14.15□□□□□ -0.14
USP39-206ENST00000448971 GEMIN8Q9NWZ8 242 aaKnown RBP14.15□□□□□ -0.14
USP39-206ENST00000448971 OCIAD1Q9NX40 245 aa14.15□□□□□ -0.14
USP39-206ENST00000448971 SLC39A1Q9NY26 324 aa14.15□□□□□ -0.14
USP39-206ENST00000448971 EPHA6Q9UF33 1036 aa14.15□□□□□ -0.14
USP39-206ENST00000448971 ZC3H7BQ9UGR2 993 aaKnown RBP14.15□□□□□ -0.14
USP39-206ENST00000448971 CDC23Q9UJX2 597 aa14.15□□□□□ -0.14
USP39-206ENST00000448971 TDRKHQ9Y2W6 561 aaKnown RBP14.15□□□□□ -0.14
USP39-206ENST00000448971 UTP11Q9Y3A2 253 aaKnown RBP14.15□□□□□ -0.14
USP39-206ENST00000448971 FAM169AQ9Y6X4 670 aa14.15□□□□□ -0.14
USP39-206ENST00000448971 USP9YO00507 2555 aaPredicted RBP14.15□□□□□ -0.14
USP39-206ENST00000448971 TLCD2A6NGC4 264 aa14.14□□□□□ -0.15
USP39-206ENST00000448971 BHMG1C9JSJ3 638 aaPredicted RBP14.14□□□□□ -0.15
USP39-206ENST00000448971 KIF2AO00139 706 aaPredicted RBP14.14□□□□□ -0.15
USP39-206ENST00000448971 TOX3O15405 576 aaPredicted RBP14.14□□□□□ -0.15
USP39-206ENST00000448971 KIF1CO43896 1103 aaKnown RBP14.14□□□□□ -0.15
USP39-206ENST00000448971 RPN2P04844 631 aa14.14□□□□□ -0.15
USP39-206ENST00000448971 FGF3P11487 239 aaPredicted RBP14.14□□□□□ -0.15
USP39-206ENST00000448971 PKMP14618 531 aaKnown RBP14.14□□□□□ -0.15
USP39-206ENST00000448971 POLR2CP19387 275 aaPredicted RBP14.14□□□□□ -0.15
USP39-206ENST00000448971 CHRM3P20309 590 aa14.14□□□□□ -0.15
USP39-206ENST00000448971 CD82P27701 267 aa14.14□□□□□ -0.15
USP39-206ENST00000448971 AOAHP28039 575 aa14.14□□□□□ -0.15
USP39-206ENST00000448971 ELK3P41970 407 aa14.14□□□□□ -0.15
USP39-206ENST00000448971 ARL4DP49703 201 aa14.14□□□□□ -0.15
USP39-206ENST00000448971 ADARP55265 1226 aaKnown RBP14.14□□□□□ -0.15
USP39-206ENST00000448971 MPP1Q00013 466 aa14.14□□□□□ -0.15
USP39-206ENST00000448971 FOXM1Q08050 763 aa14.14□□□□□ -0.15
USP39-206ENST00000448971 PDIA2Q13087 525 aaKnown RBP14.14□□□□□ -0.15
USP39-206ENST00000448971 ZNF789Q5FWF6 425 aa14.14□□□□□ -0.15
USP39-206ENST00000448971 C8orf74Q6P047 294 aa14.14□□□□□ -0.15
USP39-206ENST00000448971 ANKMY2Q8IV38 441 aa14.14□□□□□ -0.15
USP39-206ENST00000448971 VRK3Q8IV63 474 aa14.14□□□□□ -0.15
USP39-206ENST00000448971 TBC1D21Q8IYX1 336 aa14.14□□□□□ -0.15
USP39-206ENST00000448971 UNC5BQ8IZJ1 945 aa14.14□□□□□ -0.15
USP39-206ENST00000448971 ZSCAN1Q8NBB4 408 aa14.14□□□□□ -0.15
USP39-206ENST00000448971 OR5K2Q8NHB8 316 aa14.14□□□□□ -0.15
USP39-206ENST00000448971 UBXN4Q92575 508 aa14.14□□□□□ -0.15
USP39-206ENST00000448971 PMEPA1Q969W9 287 aa14.14□□□□□ -0.15
USP39-206ENST00000448971 LRRC39Q96DD0 335 aa14.14□□□□□ -0.15
USP39-206ENST00000448971 CERS2Q96G23 380 aa14.14□□□□□ -0.15
USP39-206ENST00000448971 BIRC8Q96P09 236 aa14.14□□□□□ -0.15
USP39-206ENST00000448971 TAAR9Q96RI9 348 aa14.14□□□□□ -0.15
USP39-206ENST00000448971 CD180Q99467 661 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms