RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 PCDHA9Q9Y5H5 950 aa19.06■□□□□ 0.64
FAM3A-215ENST00000447601 ANKRD28O15084 1053 aa19.05■□□□□ 0.64
FAM3A-215ENST00000447601 SPINT1O43278 529 aa19.05■□□□□ 0.64
FAM3A-215ENST00000447601 FCARP24071 287 aa19.05■□□□□ 0.64
FAM3A-215ENST00000447601 MAP4P27816 1152 aaKnown RBP19.05■□□□□ 0.64
FAM3A-215ENST00000447601 CTSCP53634 463 aa19.05■□□□□ 0.64
FAM3A-215ENST00000447601 SHHQ15465 462 aa19.05■□□□□ 0.64
FAM3A-215ENST00000447601 SFT2D3Q587I9 215 aa19.05■□□□□ 0.64
FAM3A-215ENST00000447601 PAGE3Q5JUK9 113 aa19.05■□□□□ 0.64
FAM3A-215ENST00000447601 HABP4Q5JVS0 413 aaKnown RBP19.05■□□□□ 0.64
FAM3A-215ENST00000447601 CACHD1Q5VU97 1274 aa19.05■□□□□ 0.64
FAM3A-215ENST00000447601 PRR23BQ6ZRT6 265 aa19.05■□□□□ 0.64
FAM3A-215ENST00000447601 CPA6Q8N4T0 437 aa19.05■□□□□ 0.64
FAM3A-215ENST00000447601 ADCY4Q8NFM4 1077 aa19.05■□□□□ 0.64
FAM3A-215ENST00000447601 NR1H4Q96RI1 486 aaPredicted RBP19.05■□□□□ 0.64
FAM3A-215ENST00000447601 ZCCHC2Q9C0B9 1178 aaKnown RBP19.05■□□□□ 0.64
FAM3A-215ENST00000447601 TMEM245Q9H330 911 aa19.05■□□□□ 0.64
FAM3A-215ENST00000447601 ACTL8Q9H568 366 aa19.05■□□□□ 0.64
FAM3A-215ENST00000447601 EPHX3Q9H6B9 360 aa19.05■□□□□ 0.64
FAM3A-215ENST00000447601 LRTM1Q9HBL6 345 aa19.05■□□□□ 0.64
FAM3A-215ENST00000447601 DYRK4Q9NR20 520 aa19.05■□□□□ 0.64
FAM3A-215ENST00000447601 PSIP1O75475 530 aaKnown RBP19.04■□□□□ 0.64
FAM3A-215ENST00000447601 METAP1P53582 386 aa19.04■□□□□ 0.64
FAM3A-215ENST00000447601 CPSF6Q16630 551 aaKnown RBP eCLIP19.04■□□□□ 0.64
FAM3A-215ENST00000447601 SGO1Q5FBB7 561 aa19.04■□□□□ 0.64
FAM3A-215ENST00000447601 IRAK1BP1Q5VVH5 260 aa19.04■□□□□ 0.64
FAM3A-215ENST00000447601 DSG4Q86SJ6 1040 aa19.04■□□□□ 0.64
FAM3A-215ENST00000447601 GPR149Q86SP6 731 aa19.04■□□□□ 0.64
FAM3A-215ENST00000447601 RGL4Q8IZJ4 473 aa19.04■□□□□ 0.64
FAM3A-215ENST00000447601 DPP10Q8N608 796 aa19.04■□□□□ 0.64
FAM3A-215ENST00000447601 L3MBTL4Q8NA19 623 aa19.04■□□□□ 0.64
FAM3A-215ENST00000447601 ICA1LQ8NDH6 482 aa19.04■□□□□ 0.64
FAM3A-215ENST00000447601 OR2T34Q8NGX1 318 aa19.04■□□□□ 0.64
FAM3A-215ENST00000447601 OR2T3Q8NH03 318 aa19.04■□□□□ 0.64
FAM3A-215ENST00000447601 TMEM125Q96AQ2 219 aa19.04■□□□□ 0.64
FAM3A-215ENST00000447601 PKP2Q99959 881 aa19.04■□□□□ 0.64
FAM3A-215ENST00000447601 EFHD1Q9BUP0 239 aa19.04■□□□□ 0.64
FAM3A-215ENST00000447601 MUC13Q9H3R2 512 aa19.04■□□□□ 0.64
FAM3A-215ENST00000447601 ZFP14Q9HCL3 533 aa19.04■□□□□ 0.64
FAM3A-215ENST00000447601 PLXNA2O75051 1894 aa19.04■□□□□ 0.64
FAM3A-215ENST00000447601 TBC1D3BA6NDS4 549 aa19.04■□□□□ 0.64
FAM3A-215ENST00000447601 ARNTLO00327 626 aa19.04■□□□□ 0.64
FAM3A-215ENST00000447601 AREL1O15033 823 aa19.04■□□□□ 0.64
FAM3A-215ENST00000447601 INPP4BO15327 924 aa19.04■□□□□ 0.64
FAM3A-215ENST00000447601 DNAJA2O60884 412 aa19.04■□□□□ 0.64
FAM3A-215ENST00000447601 ADRB3P13945 408 aa19.04■□□□□ 0.64
FAM3A-215ENST00000447601 VARSP26640 1264 aaKnown RBP19.04■□□□□ 0.64
FAM3A-215ENST00000447601 SLC7A1P30825 629 aa19.04■□□□□ 0.64
FAM3A-215ENST00000447601 CASP2P42575 452 aa19.04■□□□□ 0.64
FAM3A-215ENST00000447601 AQP4P55087 323 aa19.04■□□□□ 0.64
FAM3A-215ENST00000447601 HMGCS1Q01581 520 aa19.04■□□□□ 0.64
FAM3A-215ENST00000447601 ZXDCQ2QGD7 858 aaPredicted RBP19.04■□□□□ 0.64
FAM3A-215ENST00000447601 CYP2R1Q6VVX0 501 aa19.04■□□□□ 0.64
FAM3A-215ENST00000447601 LILRA2Q8N149 483 aa19.04■□□□□ 0.64
FAM3A-215ENST00000447601 GOLM1Q8NBJ4 401 aa19.04■□□□□ 0.64
FAM3A-215ENST00000447601 GLB1L3Q8NCI6 653 aaPredicted RBP19.04■□□□□ 0.64
FAM3A-215ENST00000447601 ATL1Q8WXF7 558 aa19.04■□□□□ 0.64
FAM3A-215ENST00000447601 NUS1Q96E22 293 aa19.04■□□□□ 0.64
FAM3A-215ENST00000447601 BTBD9Q96Q07 612 aa19.04■□□□□ 0.64
FAM3A-215ENST00000447601 FAM129BQ96TA1 746 aa19.04■□□□□ 0.64
FAM3A-215ENST00000447601 ELOVL6Q9H5J4 265 aa19.04■□□□□ 0.64
FAM3A-215ENST00000447601 C1orf109Q9NX04 203 aa19.04■□□□□ 0.64
FAM3A-215ENST00000447601 ZNHIT2Q9UHR6 403 aa19.04■□□□□ 0.64
FAM3A-215ENST00000447601 SLC5A10A0PJK1 596 aa19.03■□□□□ 0.64
FAM3A-215ENST00000447601 TMEM202A6NGA9 273 aa19.03■□□□□ 0.64
FAM3A-215ENST00000447601 AQP12BA6NM10 295 aa19.03■□□□□ 0.64
FAM3A-215ENST00000447601 SEC22BO75396 215 aa19.03■□□□□ 0.64
FAM3A-215ENST00000447601 RECQL5O94762 991 aaPredicted RBP19.03■□□□□ 0.64
FAM3A-215ENST00000447601 CATP04040 527 aaKnown RBP19.03■□□□□ 0.64
FAM3A-215ENST00000447601 PBX2P40425 430 aa19.03■□□□□ 0.64
FAM3A-215ENST00000447601 TANGO2Q6ICL3 276 aa19.03■□□□□ 0.64
FAM3A-215ENST00000447601 NEK5Q6P3R8 708 aa19.03■□□□□ 0.64
FAM3A-215ENST00000447601 TMEM220Q6QAJ8 160 aa19.03■□□□□ 0.64
FAM3A-215ENST00000447601 AQP12AQ8IXF9 295 aa19.03■□□□□ 0.64
FAM3A-215ENST00000447601 DNAJB14Q8TBM8 379 aa19.03■□□□□ 0.64
FAM3A-215ENST00000447601 SELENOMQ8WWX9 145 aa19.03■□□□□ 0.64
FAM3A-215ENST00000447601 SUSD6Q92537 303 aa19.03■□□□□ 0.64
FAM3A-215ENST00000447601 ACTR3BQ9P1U1 418 aa19.03■□□□□ 0.64
FAM3A-215ENST00000447601 FAM8A1Q9UBU6 413 aa19.03■□□□□ 0.64
FAM3A-215ENST00000447601 SLC22A14Q9Y267 594 aa19.03■□□□□ 0.64
FAM3A-215ENST00000447601 CHD7Q9P2D1 2997 aa19.03■□□□□ 0.64
FAM3A-215ENST00000447601 KCNE1BA0A087WTH5 132 aa19.02■□□□□ 0.64
FAM3A-215ENST00000447601 ARHGEF33A8MVX0 844 aa19.02■□□□□ 0.64
FAM3A-215ENST00000447601 C1QTNF3-AMACRE9PGA6 284 aa19.02■□□□□ 0.64
FAM3A-215ENST00000447601 RNASEH2AO75792 299 aaKnown RBP19.02■□□□□ 0.64
FAM3A-215ENST00000447601 EEFSECP57772 596 aaKnown RBP19.02■□□□□ 0.64
FAM3A-215ENST00000447601 BCL7AQ4VC05 210 aa19.02■□□□□ 0.64
FAM3A-215ENST00000447601 LCN8Q6JVE9 175 aa19.02■□□□□ 0.64
FAM3A-215ENST00000447601 SLC2A7Q6PXP3 512 aa19.02■□□□□ 0.64
FAM3A-215ENST00000447601 VITQ6UXI7 678 aa19.02■□□□□ 0.64
FAM3A-215ENST00000447601 NLRP8Q86W28 1048 aa19.02■□□□□ 0.64
FAM3A-215ENST00000447601 PYCR2Q96C36 320 aa19.02■□□□□ 0.64
FAM3A-215ENST00000447601 FOPNLQ96NB1 174 aa19.02■□□□□ 0.64
FAM3A-215ENST00000447601 ACPTQ9BZG2 426 aa19.02■□□□□ 0.64
FAM3A-215ENST00000447601 ALG2Q9H553 416 aa19.02■□□□□ 0.64
FAM3A-215ENST00000447601 CDH7Q9ULB5 785 aa19.02■□□□□ 0.64
FAM3A-215ENST00000447601 COQ6Q9Y2Z9 468 aa19.02■□□□□ 0.64
FAM3A-215ENST00000447601 PDE4DIPQ5VU43 2346 aa19.02■□□□□ 0.64
FAM3A-215ENST00000447601 RSL1D1O76021 490 aaKnown RBP19.02■□□□□ 0.63
FAM3A-215ENST00000447601 SOD1P00441 154 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms