RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 TIFABQ6ZNK6 161 aa16.78■□□□□ 0.28
LIME1-202ENST00000444951 TRIM48Q8IWZ4 208 aa16.78■□□□□ 0.28
LIME1-202ENST00000444951 NAGSQ8N159 534 aa16.78■□□□□ 0.28
LIME1-202ENST00000444951 KYQ8NBH2 561 aa16.78■□□□□ 0.28
LIME1-202ENST00000444951 KCTD4Q8WVF5 259 aa16.78■□□□□ 0.28
LIME1-202ENST00000444951 TFGQ92734 400 aaPredicted RBP16.78■□□□□ 0.28
LIME1-202ENST00000444951 FOPNLQ96NB1 174 aa16.78■□□□□ 0.28
LIME1-202ENST00000444951 FERD3LQ96RJ6 166 aa16.78■□□□□ 0.28
LIME1-202ENST00000444951 ZNF446Q9NWS9 450 aa16.78■□□□□ 0.28
LIME1-202ENST00000444951 NLGN3Q9NZ94 848 aa16.78■□□□□ 0.28
LIME1-202ENST00000444951 CIDEBQ9UHD4 219 aa16.78■□□□□ 0.28
LIME1-202ENST00000444951 ASF1AQ9Y294 204 aa16.78■□□□□ 0.28
LIME1-202ENST00000444951 ZFC3H1O60293 1989 aaKnown RBP16.78■□□□□ 0.28
LIME1-202ENST00000444951 NPEPPSL1A6NEC2 478 aa16.77■□□□□ 0.28
LIME1-202ENST00000444951 BTN3A1O00481 513 aa16.77■□□□□ 0.28
LIME1-202ENST00000444951 SASH3O75995 380 aa16.77■□□□□ 0.28
LIME1-202ENST00000444951 TSPAN12O95859 305 aa16.77■□□□□ 0.28
LIME1-202ENST00000444951 GIMD1P0DJR0 217 aa16.77■□□□□ 0.28
LIME1-202ENST00000444951 MTHFD1P11586 935 aaKnown RBP16.77■□□□□ 0.28
LIME1-202ENST00000444951 ENO3P13929 434 aaPredicted RBP16.77■□□□□ 0.28
LIME1-202ENST00000444951 SLC2A4P14672 509 aa16.77■□□□□ 0.28
LIME1-202ENST00000444951 CKMT2P17540 419 aa16.77■□□□□ 0.28
LIME1-202ENST00000444951 ATP5DP30049 168 aa16.77■□□□□ 0.28
LIME1-202ENST00000444951 BDKRB1P46663 353 aa16.77■□□□□ 0.28
LIME1-202ENST00000444951 DLG1Q12959 904 aa16.77■□□□□ 0.28
LIME1-202ENST00000444951 PRKG2Q13237 762 aa16.77■□□□□ 0.28
LIME1-202ENST00000444951 C6orf132Q5T0Z8 1188 aa16.77■□□□□ 0.28
LIME1-202ENST00000444951 CAPRIN2Q6IMN6 1127 aaKnown RBP16.77■□□□□ 0.28
LIME1-202ENST00000444951 WASH2PQ6VEQ5 465 aa16.77■□□□□ 0.28
LIME1-202ENST00000444951 CROCCP2Q86T23 111 aa16.77■□□□□ 0.28
LIME1-202ENST00000444951 SRRM1Q8IYB3 904 aaKnown RBP16.77■□□□□ 0.28
LIME1-202ENST00000444951 C4orf33Q8N1A6 199 aa16.77■□□□□ 0.28
LIME1-202ENST00000444951 OR4C6Q8NH72 309 aa16.77■□□□□ 0.28
LIME1-202ENST00000444951 MAPK15Q8TD08 544 aa16.77■□□□□ 0.28
LIME1-202ENST00000444951 SLC37A2Q8TED4 501 aa16.77■□□□□ 0.28
LIME1-202ENST00000444951 NXNL1Q96CM4 212 aa16.77■□□□□ 0.28
LIME1-202ENST00000444951 DCBLD2Q96PD2 775 aa16.77■□□□□ 0.28
LIME1-202ENST00000444951 WASH6PQ9NQA3 447 aa16.77■□□□□ 0.28
LIME1-202ENST00000444951 ZNF624Q9P2J8 865 aaPredicted RBP16.77■□□□□ 0.28
LIME1-202ENST00000444951 IKZF3Q9UKT9 509 aa16.77■□□□□ 0.28
LIME1-202ENST00000444951 TDRKHQ9Y2W6 561 aaKnown RBP16.77■□□□□ 0.28
LIME1-202ENST00000444951 PTPRQQ9UMZ3 2332 aa16.76■□□□□ 0.27
LIME1-202ENST00000444951 CDC7O00311 574 aa16.76■□□□□ 0.27
LIME1-202ENST00000444951 DYNC1I1O14576 645 aa16.76■□□□□ 0.27
LIME1-202ENST00000444951 NOBOXO60393 691 aa16.76■□□□□ 0.27
LIME1-202ENST00000444951 WISP3O95389 354 aaPredicted RBP16.76■□□□□ 0.27
LIME1-202ENST00000444951 VIPP01282 170 aa16.76■□□□□ 0.27
LIME1-202ENST00000444951 LTA4HP09960 611 aaKnown RBP16.76■□□□□ 0.27
LIME1-202ENST00000444951 MPC1LP0DKB6 136 aa16.76■□□□□ 0.27
LIME1-202ENST00000444951 ITPKBP27987 946 aa16.76■□□□□ 0.27
LIME1-202ENST00000444951 ACADLP28330 430 aa16.76■□□□□ 0.27
LIME1-202ENST00000444951 SLC19A1P41440 591 aa16.76■□□□□ 0.27
LIME1-202ENST00000444951 MAGEA12P43365 314 aa16.76■□□□□ 0.27
LIME1-202ENST00000444951 GLRBP48167 497 aa16.76■□□□□ 0.27
LIME1-202ENST00000444951 INSM1Q01101 510 aaPredicted RBP16.76■□□□□ 0.27
LIME1-202ENST00000444951 CYHR1Q6ZMK1 362 aa16.76■□□□□ 0.27
LIME1-202ENST00000444951 UBE2R2Q712K3 238 aaPredicted RBP16.76■□□□□ 0.27
LIME1-202ENST00000444951 ZNF761Q86XN6 746 aaPredicted RBP16.76■□□□□ 0.27
LIME1-202ENST00000444951 SLC35F3Q8IY50 421 aa16.76■□□□□ 0.27
LIME1-202ENST00000444951 OR5AR1Q8NGP9 310 aa16.76■□□□□ 0.27
LIME1-202ENST00000444951 JPH3Q8WXH2 748 aaPredicted RBP16.76■□□□□ 0.27
LIME1-202ENST00000444951 ISL2Q96A47 359 aa16.76■□□□□ 0.27
LIME1-202ENST00000444951 NXPE2Q96DL1 559 aa16.76■□□□□ 0.27
LIME1-202ENST00000444951 SCYL1Q96KG9 808 aa16.76■□□□□ 0.27
LIME1-202ENST00000444951 TSNARE1Q96NA8 513 aa16.76■□□□□ 0.27
LIME1-202ENST00000444951 HGH1Q9BTY7 390 aa16.76■□□□□ 0.27
LIME1-202ENST00000444951 DUSP23Q9BVJ7 150 aa16.76■□□□□ 0.27
LIME1-202ENST00000444951 VIPAS39Q9H9C1 493 aa16.76■□□□□ 0.27
LIME1-202ENST00000444951 IGSF5Q9NSI5 407 aa16.76■□□□□ 0.27
LIME1-202ENST00000444951 ZNF358Q9NW07 568 aa16.76■□□□□ 0.27
LIME1-202ENST00000444951 ADAMTS6Q9UKP5 1117 aa16.76■□□□□ 0.27
LIME1-202ENST00000444951 KIR2DS5A0A0G2JLQ3 304 aa16.75■□□□□ 0.27
LIME1-202ENST00000444951 A0A0G2JNG1 304 aa16.75■□□□□ 0.27
LIME1-202ENST00000444951 KRT87PA6NCN2 255 aa16.75■□□□□ 0.27
LIME1-202ENST00000444951 OR5K4A6NMS3 321 aa16.75■□□□□ 0.27
LIME1-202ENST00000444951 KIR2DS3K7RE56 304 aa16.75■□□□□ 0.27
LIME1-202ENST00000444951 AGPSO00116 658 aa16.75■□□□□ 0.27
LIME1-202ENST00000444951 EIF3FO00303 357 aaPredicted RBP16.75■□□□□ 0.27
LIME1-202ENST00000444951 ZBTB14O43829 449 aa16.75■□□□□ 0.27
LIME1-202ENST00000444951 SYF2O95926 243 aaKnown RBP16.75■□□□□ 0.27
LIME1-202ENST00000444951 KRT4P19013 534 aa16.75■□□□□ 0.27
LIME1-202ENST00000444951 ACP1P24666 158 aa16.75■□□□□ 0.27
LIME1-202ENST00000444951 CSRP3P50461 194 aa16.75■□□□□ 0.27
LIME1-202ENST00000444951 KIR2DS5Q14953 304 aa16.75■□□□□ 0.27
LIME1-202ENST00000444951 TSNQ15631 228 aaKnown RBP16.75■□□□□ 0.27
LIME1-202ENST00000444951 FAM83EQ2M2I3 478 aa16.75■□□□□ 0.27
LIME1-202ENST00000444951 C14orf28Q4W4Y0 310 aa16.75■□□□□ 0.27
LIME1-202ENST00000444951 LRRC8EQ6NSJ5 796 aa16.75■□□□□ 0.27
LIME1-202ENST00000444951 ZCCHC8Q6NZY4 707 aaKnown RBP16.75■□□□□ 0.27
LIME1-202ENST00000444951 NEK10Q6ZWH5 1172 aa16.75■□□□□ 0.27
LIME1-202ENST00000444951 SLC9B2Q86UD5 537 aa16.75■□□□□ 0.27
LIME1-202ENST00000444951 TRABD2AQ86V40 505 aa16.75■□□□□ 0.27
LIME1-202ENST00000444951 CENPLQ8N0S6 344 aaPredicted RBP16.75■□□□□ 0.27
LIME1-202ENST00000444951 PLD6Q8N2A8 252 aaKnown RBP16.75■□□□□ 0.27
LIME1-202ENST00000444951 SFRP1Q8N474 314 aa16.75■□□□□ 0.27
LIME1-202ENST00000444951 ARL14Q8N4G2 192 aa16.75■□□□□ 0.27
LIME1-202ENST00000444951 ARL10Q8N8L6 244 aa16.75■□□□□ 0.27
LIME1-202ENST00000444951 EXT2Q93063 718 aa16.75■□□□□ 0.27
LIME1-202ENST00000444951 CABS1Q96KC9 395 aa16.75■□□□□ 0.27
LIME1-202ENST00000444951 APOLD1Q96LR9 279 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms