RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 TTC39CQ8N584 583 aa6.78□□□□□ -1.32
SSXP3-201ENST00000442971 HORMAD2Q8N7B1 307 aa6.78□□□□□ -1.32
SSXP3-201ENST00000442971 PAF1Q8N7H5 531 aa6.78□□□□□ -1.32
SSXP3-201ENST00000442971 ZNF507Q8TCN5 953 aa6.78□□□□□ -1.32
SSXP3-201ENST00000442971 N4BP2L2Q92802 583 aaPredicted RBP6.78□□□□□ -1.32
SSXP3-201ENST00000442971 ART5Q96L15 291 aa6.78□□□□□ -1.32
SSXP3-201ENST00000442971 WDR83Q9BRX9 315 aaKnown RBP6.78□□□□□ -1.32
SSXP3-201ENST00000442971 RHNO1Q9BSD3 238 aa6.78□□□□□ -1.32
SSXP3-201ENST00000442971 RBM4Q9BWF3 364 aaKnown RBP6.78□□□□□ -1.32
SSXP3-201ENST00000442971 AGPAT3Q9NRZ7 376 aa6.78□□□□□ -1.32
SSXP3-201ENST00000442971 NOL7Q9UMY1 257 aaKnown RBP6.78□□□□□ -1.32
SSXP3-201ENST00000442971 IGHV4-30-2A0A087WSY4 118 aa6.77□□□□□ -1.32
SSXP3-201ENST00000442971 BCKDKO14874 412 aa6.77□□□□□ -1.32
SSXP3-201ENST00000442971 ZSCAN9O15535 394 aaPredicted RBP6.77□□□□□ -1.32
SSXP3-201ENST00000442971 NME2P1O60361 137 aa6.77□□□□□ -1.32
SSXP3-201ENST00000442971 NEURL1O76050 574 aa6.77□□□□□ -1.32
SSXP3-201ENST00000442971 HEXIM1O94992 359 aaKnown RBP6.77□□□□□ -1.32
SSXP3-201ENST00000442971 PIM1P11309 404 aaPredicted RBP6.77□□□□□ -1.32
SSXP3-201ENST00000442971 ST6GAL1P15907 406 aa6.77□□□□□ -1.32
SSXP3-201ENST00000442971 UGT1A1P22309 533 aa6.77□□□□□ -1.32
SSXP3-201ENST00000442971 NME2P22392 152 aa6.77□□□□□ -1.32
SSXP3-201ENST00000442971 ALAS2P22557 587 aa6.77□□□□□ -1.32
SSXP3-201ENST00000442971 HOXD13P35453 343 aa6.77□□□□□ -1.32
SSXP3-201ENST00000442971 RFC3P40938 356 aa6.77□□□□□ -1.32
SSXP3-201ENST00000442971 YWHAZP63104 245 aaKnown RBP6.77□□□□□ -1.32
SSXP3-201ENST00000442971 TMPRSS15P98073 1019 aa6.77□□□□□ -1.32
SSXP3-201ENST00000442971 CDK17Q00537 523 aa6.77□□□□□ -1.32
SSXP3-201ENST00000442971 OC90Q02509 493 aaPredicted RBP6.77□□□□□ -1.32
SSXP3-201ENST00000442971 FOXO1Q12778 655 aa6.77□□□□□ -1.32
SSXP3-201ENST00000442971 TRIM14Q14142 442 aa6.77□□□□□ -1.32
SSXP3-201ENST00000442971 SF3B4Q15427 424 aaKnown RBP eCLIP6.77□□□□□ -1.32
SSXP3-201ENST00000442971 FCRLBQ6BAA4 426 aa6.77□□□□□ -1.32
SSXP3-201ENST00000442971 PAOXQ6QHF9 649 aa6.77□□□□□ -1.32
SSXP3-201ENST00000442971 FIGLAQ6QHK4 219 aa6.77□□□□□ -1.32
SSXP3-201ENST00000442971 CDHR3Q6ZTQ4 885 aa6.77□□□□□ -1.32
SSXP3-201ENST00000442971 ZNF655Q8N720 491 aaPredicted RBP6.77□□□□□ -1.32
SSXP3-201ENST00000442971 AMER2Q8N7J2 671 aa6.77□□□□□ -1.32
SSXP3-201ENST00000442971 BANPQ8N9N5 519 aa6.77□□□□□ -1.32
SSXP3-201ENST00000442971 OR52N2Q8NGI0 321 aa6.77□□□□□ -1.32
SSXP3-201ENST00000442971 EXD1Q8NHP7 514 aa6.77□□□□□ -1.32
SSXP3-201ENST00000442971 CREB3L4Q8TEY5 395 aa6.77□□□□□ -1.32
SSXP3-201ENST00000442971 KCNB2Q92953 911 aa6.77□□□□□ -1.32
SSXP3-201ENST00000442971 AP2M1Q96CW1 435 aa6.77□□□□□ -1.32
SSXP3-201ENST00000442971 HSFY1Q96LI6 401 aa6.77□□□□□ -1.32
SSXP3-201ENST00000442971 ZNF354BQ96LW1 612 aa6.77□□□□□ -1.32
SSXP3-201ENST00000442971 TUBGCP5Q96RT8 1024 aa6.77□□□□□ -1.32
SSXP3-201ENST00000442971 PIGQQ9BRB3 760 aa6.77□□□□□ -1.32
SSXP3-201ENST00000442971 DEF6Q9H4E7 631 aa6.77□□□□□ -1.32
SSXP3-201ENST00000442971 ALG2Q9H553 416 aa6.77□□□□□ -1.32
SSXP3-201ENST00000442971 RIC8BQ9NVN3 520 aa6.77□□□□□ -1.32
SSXP3-201ENST00000442971 LHX3Q9UBR4 397 aa6.77□□□□□ -1.32
SSXP3-201ENST00000442971 CTSFQ9UBX1 484 aa6.77□□□□□ -1.32
SSXP3-201ENST00000442971 NKX1-2Q9UD57 310 aaPredicted RBP6.77□□□□□ -1.32
SSXP3-201ENST00000442971 CD84Q9UIB8 345 aa6.77□□□□□ -1.32
SSXP3-201ENST00000442971 KIAA1549Q9HCM3 1950 aa6.76□□□□□ -1.33
SSXP3-201ENST00000442971 IGHV1-45A0A0A0MS14 117 aa6.76□□□□□ -1.33
SSXP3-201ENST00000442971 LOC100289279A0A1B0GTE1 492 aa6.76□□□□□ -1.33
SSXP3-201ENST00000442971 FAM234BA2RU67 622 aa6.76□□□□□ -1.33
SSXP3-201ENST00000442971 OR6C74A6NCV1 312 aa6.76□□□□□ -1.33
SSXP3-201ENST00000442971 VSTM2BA6NLU5 285 aa6.76□□□□□ -1.33
SSXP3-201ENST00000442971 GOLGA8SH3BPF8 625 aa6.76□□□□□ -1.33
SSXP3-201ENST00000442971 WDR1O75083 606 aa6.76□□□□□ -1.33
SSXP3-201ENST00000442971 ICAM2P13598 275 aa6.76□□□□□ -1.33
SSXP3-201ENST00000442971 TNFAIP3P21580 790 aa6.76□□□□□ -1.33
SSXP3-201ENST00000442971 SERPINA4P29622 427 aa6.76□□□□□ -1.33
SSXP3-201ENST00000442971 SRP14P37108 136 aaKnown RBP6.76□□□□□ -1.33
SSXP3-201ENST00000442971 DRG2P55039 364 aaKnown RBP6.76□□□□□ -1.33
SSXP3-201ENST00000442971 MTTPP55157 894 aa6.76□□□□□ -1.33
SSXP3-201ENST00000442971 GUCY1B3Q02153 619 aa6.76□□□□□ -1.33
SSXP3-201ENST00000442971 EEF1A2Q05639 463 aaKnown RBP6.76□□□□□ -1.33
SSXP3-201ENST00000442971 KLC1Q07866 573 aa6.76□□□□□ -1.33
SSXP3-201ENST00000442971 FOXL1Q12952 345 aa6.76□□□□□ -1.33
SSXP3-201ENST00000442971 NME3Q13232 169 aa6.76□□□□□ -1.33
SSXP3-201ENST00000442971 CCDC38Q502W7 563 aa6.76□□□□□ -1.33
SSXP3-201ENST00000442971 INO80DQ53TQ3 878 aaPredicted RBP6.76□□□□□ -1.33
SSXP3-201ENST00000442971 ARTNQ5T4W7 220 aa6.76□□□□□ -1.33
SSXP3-201ENST00000442971 POMZP3Q6PJE2 187 aa6.76□□□□□ -1.33
SSXP3-201ENST00000442971 COX15Q7KZN9 410 aa6.76□□□□□ -1.33
SSXP3-201ENST00000442971 NAXEQ8NCW5 288 aa6.76□□□□□ -1.33
SSXP3-201ENST00000442971 FBXO18Q8NFZ0 1043 aa6.76□□□□□ -1.33
SSXP3-201ENST00000442971 GPR150Q8NGU9 434 aa6.76□□□□□ -1.33
SSXP3-201ENST00000442971 C16orf52Q8NHV5 167 aa6.76□□□□□ -1.33
SSXP3-201ENST00000442971 RXFP2Q8WXD0 754 aa6.76□□□□□ -1.33
SSXP3-201ENST00000442971 CASKIN2Q8WXE0 1202 aa6.76□□□□□ -1.33
SSXP3-201ENST00000442971 DNAJC19Q96DA6 116 aa6.76□□□□□ -1.33
SSXP3-201ENST00000442971 ECHDC3Q96DC8 303 aa6.76□□□□□ -1.33
SSXP3-201ENST00000442971 ITPKCQ96DU7 683 aa6.76□□□□□ -1.33
SSXP3-201ENST00000442971 DEFB127Q9H1M4 99 aa6.76□□□□□ -1.33
SSXP3-201ENST00000442971 ABCG8Q9H221 673 aa6.76□□□□□ -1.33
SSXP3-201ENST00000442971 ZFYVE1Q9HBF4 777 aa6.76□□□□□ -1.33
SSXP3-201ENST00000442971 ZNF629Q9UEG4 869 aaPredicted RBP6.76□□□□□ -1.33
SSXP3-201ENST00000442971 SLC23A2Q9UGH3 650 aa6.76□□□□□ -1.33
SSXP3-201ENST00000442971 NDRG3Q9UGV2 375 aa6.76□□□□□ -1.33
SSXP3-201ENST00000442971 KLHL21Q9UJP4 597 aa6.76□□□□□ -1.33
SSXP3-201ENST00000442971 LIMCH1Q9UPQ0 1083 aa6.76□□□□□ -1.33
SSXP3-201ENST00000442971 A0A1W2PQ72 361 aa6.76□□□□□ -1.33
SSXP3-201ENST00000442971 OR14I1A6ND48 311 aa6.76□□□□□ -1.33
SSXP3-201ENST00000442971 I6L893 689 aaPredicted RBP6.76□□□□□ -1.33
SSXP3-201ENST00000442971 RNF225M0QZC1 329 aaPredicted RBP6.76□□□□□ -1.33
SSXP3-201ENST00000442971 PSMD11O00231 422 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms