RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 ARSGQ96EG1 525 aa4.51□□□□□ -1.69
PFDN4-202ENST00000441080 NSL1Q96IY1 281 aa4.51□□□□□ -1.69
PFDN4-202ENST00000441080 CCDC177Q9NQR7 707 aaPredicted RBP4.51□□□□□ -1.69
PFDN4-202ENST00000441080 ZNF624Q9P2J8 865 aaPredicted RBP4.51□□□□□ -1.69
PFDN4-202ENST00000441080 B3GAT1Q9P2W7 334 aa4.51□□□□□ -1.69
PFDN4-202ENST00000441080 CFDP1Q9UEE9 299 aaPredicted RBP4.51□□□□□ -1.69
PFDN4-202ENST00000441080 ZNF112Q9UJU3 913 aa4.51□□□□□ -1.69
PFDN4-202ENST00000441080 MTUS1Q9ULD2 1270 aa4.51□□□□□ -1.69
PFDN4-202ENST00000441080 TCF19Q9Y242 345 aa4.51□□□□□ -1.69
PFDN4-202ENST00000441080 A0A087WYN8 130 aa4.5□□□□□ -1.69
PFDN4-202ENST00000441080 URADA6NGE7 173 aa4.5□□□□□ -1.69
PFDN4-202ENST00000441080 PMS2P5A8MQ11 134 aa4.5□□□□□ -1.69
PFDN4-202ENST00000441080 A8MXE2 369 aa4.5□□□□□ -1.69
PFDN4-202ENST00000441080 SMIM1B2RUZ4 78 aa4.5□□□□□ -1.69
PFDN4-202ENST00000441080 TRIM77I1YAP6 450 aa4.5□□□□□ -1.69
PFDN4-202ENST00000441080 DKC1O60832 514 aaKnown RBP eCLIP4.5□□□□□ -1.69
PFDN4-202ENST00000441080 RNASEH1O60930 286 aaKnown RBP4.5□□□□□ -1.69
PFDN4-202ENST00000441080 SLCO2B1O94956 709 aa4.5□□□□□ -1.69
PFDN4-202ENST00000441080 IGKV3-20P01619 116 aa4.5□□□□□ -1.69
PFDN4-202ENST00000441080 CENPBP07199 599 aaPredicted RBP4.5□□□□□ -1.69
PFDN4-202ENST00000441080 SP1P08047 785 aa4.5□□□□□ -1.69
PFDN4-202ENST00000441080 RAB40ALP0C0E4 278 aa4.5□□□□□ -1.69
PFDN4-202ENST00000441080 PTPN3P26045 913 aa4.5□□□□□ -1.69
PFDN4-202ENST00000441080 PTPRCAPQ14761 206 aa4.5□□□□□ -1.69
PFDN4-202ENST00000441080 VWC2Q2TAL6 325 aa4.5□□□□□ -1.69
PFDN4-202ENST00000441080 DCAF10Q5QP82 559 aa4.5□□□□□ -1.69
PFDN4-202ENST00000441080 ELFN2Q5R3F8 820 aa4.5□□□□□ -1.69
PFDN4-202ENST00000441080 CST9LP1Q5W188 147 aa4.5□□□□□ -1.69
PFDN4-202ENST00000441080 PLA2G4FQ68DD2 849 aa4.5□□□□□ -1.69
PFDN4-202ENST00000441080 TMPRSS11BQ86T26 416 aa4.5□□□□□ -1.69
PFDN4-202ENST00000441080 GRAPLQ8TC17 118 aaPredicted RBP4.5□□□□□ -1.69
PFDN4-202ENST00000441080 SSMEM1Q8WWF3 244 aa4.5□□□□□ -1.69
PFDN4-202ENST00000441080 IRGQQ8WZA9 623 aa4.5□□□□□ -1.69
PFDN4-202ENST00000441080 HSD17B8Q92506 261 aa4.5□□□□□ -1.69
PFDN4-202ENST00000441080 SYN2Q92777 582 aaPredicted RBP4.5□□□□□ -1.69
PFDN4-202ENST00000441080 ZNF524Q96C55 264 aa4.5□□□□□ -1.69
PFDN4-202ENST00000441080 CFAP57Q96MR6 1250 aa4.5□□□□□ -1.69
PFDN4-202ENST00000441080 A4GALTQ9NPC4 353 aa4.5□□□□□ -1.69
PFDN4-202ENST00000441080 SERINC1Q9NRX5 453 aa4.5□□□□□ -1.69
PFDN4-202ENST00000441080 ADPRHL2Q9NX46 363 aa4.5□□□□□ -1.69
PFDN4-202ENST00000441080 ABT1Q9ULW3 272 aaKnown RBP4.5□□□□□ -1.69
PFDN4-202ENST00000441080 A0A0G2JLW4 131 aa4.49□□□□□ -1.69
PFDN4-202ENST00000441080 ERVV-2B6SEH9 535 aa4.49□□□□□ -1.69
PFDN4-202ENST00000441080 DNM1LO00429 736 aa4.49□□□□□ -1.69
PFDN4-202ENST00000441080 PLOD2O00469 737 aa4.49□□□□□ -1.69
PFDN4-202ENST00000441080 TBX10O75333 385 aa4.49□□□□□ -1.69
PFDN4-202ENST00000441080 ZBTB49Q6ZSB9 765 aa4.49□□□□□ -1.69
PFDN4-202ENST00000441080 DET1Q7L5Y6 550 aa4.49□□□□□ -1.69
PFDN4-202ENST00000441080 SLC4A11Q8NBS3 891 aa4.49□□□□□ -1.69
PFDN4-202ENST00000441080 NPEPL1Q8NDH3 523 aa4.49□□□□□ -1.69
PFDN4-202ENST00000441080 GRHL3Q8TE85 626 aa4.49□□□□□ -1.69
PFDN4-202ENST00000441080 TMEM143Q96AN5 459 aa4.49□□□□□ -1.69
PFDN4-202ENST00000441080 VPS33AQ96AX1 596 aa4.49□□□□□ -1.69
PFDN4-202ENST00000441080 DHX58Q96C10 678 aa4.49□□□□□ -1.69
PFDN4-202ENST00000441080 ZNF653Q96CK0 615 aa4.49□□□□□ -1.69
PFDN4-202ENST00000441080 RADILQ96JH8 1075 aa4.49□□□□□ -1.69
PFDN4-202ENST00000441080 PGLYRP2Q96PD5 576 aa4.49□□□□□ -1.69
PFDN4-202ENST00000441080 BAG1Q99933 345 aaPredicted RBP4.49□□□□□ -1.69
PFDN4-202ENST00000441080 OR10A4Q9H209 315 aa4.49□□□□□ -1.69
PFDN4-202ENST00000441080 S1PR5Q9H228 398 aa4.49□□□□□ -1.69
PFDN4-202ENST00000441080 Q9N2K0 584 aa4.49□□□□□ -1.69
PFDN4-202ENST00000441080 MYNNQ9NPC7 610 aa4.49□□□□□ -1.69
PFDN4-202ENST00000441080 GKN1Q9NS71 199 aa4.49□□□□□ -1.69
PFDN4-202ENST00000441080 C5AR2Q9P296 337 aa4.49□□□□□ -1.69
PFDN4-202ENST00000441080 ZDHHC2Q9UIJ5 367 aa4.49□□□□□ -1.69
PFDN4-202ENST00000441080 CPSF3Q9UKF6 684 aaKnown RBP4.49□□□□□ -1.69
PFDN4-202ENST00000441080 NOTCH4Q99466 2003 aa4.49□□□□□ -1.69
PFDN4-202ENST00000441080 GREB1LQ9C091 1923 aaPredicted RBP4.48□□□□□ -1.69
PFDN4-202ENST00000441080 A0A1W2PN81 502 aa4.48□□□□□ -1.69
PFDN4-202ENST00000441080 BLOC1S5-TXNDC5H3BN57 136 aa4.48□□□□□ -1.69
PFDN4-202ENST00000441080 TCERG1O14776 1098 aaKnown RBP4.48□□□□□ -1.69
PFDN4-202ENST00000441080 SLC22A2O15244 555 aa4.48□□□□□ -1.69
PFDN4-202ENST00000441080 LINC01565O15544 149 aa4.48□□□□□ -1.69
PFDN4-202ENST00000441080 PRKRAO75569 313 aaKnown RBP4.48□□□□□ -1.69
PFDN4-202ENST00000441080 CELF2O95319 508 aaKnown RBP4.48□□□□□ -1.69
PFDN4-202ENST00000441080 PIGNO95427 931 aa4.48□□□□□ -1.69
PFDN4-202ENST00000441080 C22orf31O95567 290 aa4.48□□□□□ -1.69
PFDN4-202ENST00000441080 MPZP25189 248 aa4.48□□□□□ -1.69
PFDN4-202ENST00000441080 CHRNA7P36544 502 aa4.48□□□□□ -1.69
PFDN4-202ENST00000441080 RAD23AP54725 363 aa4.48□□□□□ -1.69
PFDN4-202ENST00000441080 PRKCZQ05513 592 aa4.48□□□□□ -1.69
PFDN4-202ENST00000441080 CAMK2DQ13557 499 aa4.48□□□□□ -1.69
PFDN4-202ENST00000441080 TAF13Q15543 124 aa4.48□□□□□ -1.69
PFDN4-202ENST00000441080 SYT14P1Q58G82 188 aa4.48□□□□□ -1.69
PFDN4-202ENST00000441080 KRBOX4Q5JUW0 171 aa4.48□□□□□ -1.69
PFDN4-202ENST00000441080 C1orf141Q5JVX7 400 aa4.48□□□□□ -1.69
PFDN4-202ENST00000441080 PRR27Q6MZM9 219 aa4.48□□□□□ -1.69
PFDN4-202ENST00000441080 MFSD12Q6NUT3 480 aa4.48□□□□□ -1.69
PFDN4-202ENST00000441080 CHST3Q7LGC8 479 aa4.48□□□□□ -1.69
PFDN4-202ENST00000441080 ARHGAP22Q7Z5H3 698 aa4.48□□□□□ -1.69
PFDN4-202ENST00000441080 ZNF329Q86UD4 541 aa4.48□□□□□ -1.69
PFDN4-202ENST00000441080 PI4KAP1Q8N8J0 262 aa4.48□□□□□ -1.69
PFDN4-202ENST00000441080 ZNF383Q8NA42 475 aa4.48□□□□□ -1.69
PFDN4-202ENST00000441080 MRPS27Q92552 414 aaKnown RBP4.48□□□□□ -1.69
PFDN4-202ENST00000441080 SENP5Q96HI0 755 aaPredicted RBP4.48□□□□□ -1.69
PFDN4-202ENST00000441080 NUP85Q9BW27 656 aa4.48□□□□□ -1.69
PFDN4-202ENST00000441080 ANKRD2Q9GZV1 360 aa4.48□□□□□ -1.69
PFDN4-202ENST00000441080 ZNF701Q9NV72 531 aaPredicted RBP4.48□□□□□ -1.69
PFDN4-202ENST00000441080 LRWD1Q9UFC0 647 aa4.48□□□□□ -1.69
PFDN4-202ENST00000441080 CCL27Q9Y4X3 112 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms