RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 L3MBTL4Q8NA19 623 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 PROKR1Q8TCW9 393 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 ELSPBP1Q96BH3 223 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 CHFRQ96EP1 664 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 TEX37Q96LM6 180 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 ACTR8Q9H981 624 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 C6orf203Q9P0P8 240 aaPredicted RBP11.5□□□□□ -0.57
SMAD3-202ENST00000439724 EPS15L1Q9UBC2 864 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 LEF1Q9UJU2 399 aaPredicted RBP11.5□□□□□ -0.57
SMAD3-202ENST00000439724 COQ6Q9Y2Z9 468 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 ASPDHA6ND91 283 aa11.49□□□□□ -0.57
SMAD3-202ENST00000439724 CCDC154A6NI56 674 aa11.49□□□□□ -0.57
SMAD3-202ENST00000439724 NPIPB8E9PQR5 432 aa11.49□□□□□ -0.57
SMAD3-202ENST00000439724 RFXAPO00287 272 aa11.49□□□□□ -0.57
SMAD3-202ENST00000439724 PLK4O00444 970 aa11.49□□□□□ -0.57
SMAD3-202ENST00000439724 LZTS3O60299 673 aaPredicted RBP11.49□□□□□ -0.57
SMAD3-202ENST00000439724 LILRB5O75023 590 aa11.49□□□□□ -0.57
SMAD3-202ENST00000439724 NPPAP01160 153 aa11.49□□□□□ -0.57
SMAD3-202ENST00000439724 CATP04040 527 aaKnown RBP11.49□□□□□ -0.57
SMAD3-202ENST00000439724 APODP05090 189 aa11.49□□□□□ -0.57
SMAD3-202ENST00000439724 EPHX1P07099 455 aa11.49□□□□□ -0.57
SMAD3-202ENST00000439724 C8BP07358 591 aa11.49□□□□□ -0.57
SMAD3-202ENST00000439724 RPSAP08865 295 aaKnown RBP11.49□□□□□ -0.57
SMAD3-202ENST00000439724 HSD17B1P14061 328 aa11.49□□□□□ -0.57
SMAD3-202ENST00000439724 JAK1P23458 1154 aa11.49□□□□□ -0.57
SMAD3-202ENST00000439724 IL12AP29459 219 aa11.49□□□□□ -0.57
SMAD3-202ENST00000439724 MSX2P35548 267 aaPredicted RBP11.49□□□□□ -0.57
SMAD3-202ENST00000439724 GPR1P46091 355 aa11.49□□□□□ -0.57
SMAD3-202ENST00000439724 ENPP2Q13822 863 aa11.49□□□□□ -0.57
SMAD3-202ENST00000439724 TLR1Q15399 786 aa11.49□□□□□ -0.57
SMAD3-202ENST00000439724 RFTN2Q52LD8 501 aaPredicted RBP11.49□□□□□ -0.57
SMAD3-202ENST00000439724 ATAT1Q5SQI0 421 aa11.49□□□□□ -0.57
SMAD3-202ENST00000439724 IL23RQ5VWK5 629 aa11.49□□□□□ -0.57
SMAD3-202ENST00000439724 FAM46CQ5VWP2 391 aa11.49□□□□□ -0.57
SMAD3-202ENST00000439724 EGFLAMQ63HQ2 1017 aa11.49□□□□□ -0.57
SMAD3-202ENST00000439724 NEK5Q6P3R8 708 aa11.49□□□□□ -0.57
SMAD3-202ENST00000439724 TMEM220Q6QAJ8 160 aa11.49□□□□□ -0.57
SMAD3-202ENST00000439724 TMEM126BQ8IUX1 230 aa11.49□□□□□ -0.57
SMAD3-202ENST00000439724 MMAAQ8IVH4 418 aaKnown RBP11.49□□□□□ -0.57
SMAD3-202ENST00000439724 SLC15A3Q8IY34 581 aa11.49□□□□□ -0.57
SMAD3-202ENST00000439724 KBTBD2Q8IY47 623 aa11.49□□□□□ -0.57
SMAD3-202ENST00000439724 PQLC1Q8N2U9 271 aa11.49□□□□□ -0.57
SMAD3-202ENST00000439724 ATL1Q8WXF7 558 aa11.49□□□□□ -0.57
SMAD3-202ENST00000439724 LRRC58Q96CX6 371 aa11.49□□□□□ -0.57
SMAD3-202ENST00000439724 HBEGFQ99075 208 aa11.49□□□□□ -0.57
SMAD3-202ENST00000439724 ZNF184Q99676 751 aaPredicted RBP11.49□□□□□ -0.57
SMAD3-202ENST00000439724 KXD1Q9BQD3 176 aa11.49□□□□□ -0.57
SMAD3-202ENST00000439724 VCX3BQ9H321 246 aa11.49□□□□□ -0.57
SMAD3-202ENST00000439724 ACTL8Q9H568 366 aa11.49□□□□□ -0.57
SMAD3-202ENST00000439724 ZNF490Q9ULM2 529 aaPredicted RBP11.49□□□□□ -0.57
SMAD3-202ENST00000439724 EIF3LQ9Y262 564 aaKnown RBP11.49□□□□□ -0.57
SMAD3-202ENST00000439724 POLR3HQ9Y535 204 aaPredicted RBP11.49□□□□□ -0.57
SMAD3-202ENST00000439724 FADS3Q9Y5Q0 445 aa11.49□□□□□ -0.57
SMAD3-202ENST00000439724 CKAP5Q14008 2032 aa11.49□□□□□ -0.57
SMAD3-202ENST00000439724 PRSS51A0A1B0GVH4 220 aa11.48□□□□□ -0.57
SMAD3-202ENST00000439724 SERTM1A2A2V5 107 aa11.48□□□□□ -0.57
SMAD3-202ENST00000439724 ARNTLO00327 626 aa11.48□□□□□ -0.57
SMAD3-202ENST00000439724 NME4O00746 187 aa11.48□□□□□ -0.57
SMAD3-202ENST00000439724 LIN7AO14910 233 aaPredicted RBP11.48□□□□□ -0.57
SMAD3-202ENST00000439724 UGDHO60701 494 aa11.48□□□□□ -0.57
SMAD3-202ENST00000439724 MMP20O60882 483 aa11.48□□□□□ -0.57
SMAD3-202ENST00000439724 RSL1D1O76021 490 aaKnown RBP11.48□□□□□ -0.57
SMAD3-202ENST00000439724 G6PDP11413 515 aa11.48□□□□□ -0.57
SMAD3-202ENST00000439724 LAMP2P13473 410 aa11.48□□□□□ -0.57
SMAD3-202ENST00000439724 SLC2A4P14672 509 aa11.48□□□□□ -0.57
SMAD3-202ENST00000439724 TCN1P20061 433 aaPredicted RBP11.48□□□□□ -0.57
SMAD3-202ENST00000439724 PRPH2P23942 346 aa11.48□□□□□ -0.57
SMAD3-202ENST00000439724 SLC6A2P23975 617 aa11.48□□□□□ -0.57
SMAD3-202ENST00000439724 MAP4P27816 1152 aaKnown RBP11.48□□□□□ -0.57
SMAD3-202ENST00000439724 P2RY2P41231 377 aa11.48□□□□□ -0.57
SMAD3-202ENST00000439724 GNPDA1P46926 289 aa11.48□□□□□ -0.57
SMAD3-202ENST00000439724 CCR3P51677 355 aa11.48□□□□□ -0.57
SMAD3-202ENST00000439724 GTF2A1P52655 376 aaPredicted RBP11.48□□□□□ -0.57
SMAD3-202ENST00000439724 PFN3P60673 137 aa11.48□□□□□ -0.57
SMAD3-202ENST00000439724 RPL38P63173 70 aaKnown RBP11.48□□□□□ -0.57
SMAD3-202ENST00000439724 MRPS22P82650 360 aaKnown RBP11.48□□□□□ -0.57
SMAD3-202ENST00000439724 ZNF33BQ06732 778 aa11.48□□□□□ -0.57
SMAD3-202ENST00000439724 NFYCQ13952 458 aa11.48□□□□□ -0.57
SMAD3-202ENST00000439724 MAP7D1Q3KQU3 841 aa11.48□□□□□ -0.57
SMAD3-202ENST00000439724 ITPRIPL2Q3MIP1 535 aa11.48□□□□□ -0.57
SMAD3-202ENST00000439724 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.48□□□□□ -0.57
SMAD3-202ENST00000439724 C6orf10Q5SRN2 563 aa11.48□□□□□ -0.57
SMAD3-202ENST00000439724 PIP5KL1Q5T9C9 394 aa11.48□□□□□ -0.57
SMAD3-202ENST00000439724 RAET1GQ6H3X3 334 aa11.48□□□□□ -0.57
SMAD3-202ENST00000439724 PRR23BQ6ZRT6 265 aa11.48□□□□□ -0.57
SMAD3-202ENST00000439724 NUDT18Q6ZVK8 323 aa11.48□□□□□ -0.57
SMAD3-202ENST00000439724 RGL4Q8IZJ4 473 aa11.48□□□□□ -0.57
SMAD3-202ENST00000439724 DPP10Q8N608 796 aa11.48□□□□□ -0.57
SMAD3-202ENST00000439724 FBXO15Q8NCQ5 510 aaPredicted RBP11.48□□□□□ -0.57
SMAD3-202ENST00000439724 FAM156AQ8NDB6 213 aa11.48□□□□□ -0.57
SMAD3-202ENST00000439724 CXorf40AQ8TE69 158 aa11.48□□□□□ -0.57
SMAD3-202ENST00000439724 DUS3LQ96G46 650 aaKnown RBP11.48□□□□□ -0.57
SMAD3-202ENST00000439724 SLC45A3Q96JT2 553 aa11.48□□□□□ -0.57
SMAD3-202ENST00000439724 ZNF514Q96K75 400 aaPredicted RBP11.48□□□□□ -0.57
SMAD3-202ENST00000439724 LINC00615Q96LM1 132 aaPredicted RBP11.48□□□□□ -0.57
SMAD3-202ENST00000439724 CCDC138Q96M89 665 aa11.48□□□□□ -0.57
SMAD3-202ENST00000439724 SLC39A3Q9BRY0 314 aa11.48□□□□□ -0.57
SMAD3-202ENST00000439724 LRTM1Q9HBL6 345 aa11.48□□□□□ -0.57
SMAD3-202ENST00000439724 TRIM39Q9HCM9 518 aa11.48□□□□□ -0.57
SMAD3-202ENST00000439724 FARSBQ9NSD9 589 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms