RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 TCEAL6Q6IPX3 200 aa2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 TTI2Q6NXR4 508 aa2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 DUS1LQ6P1R4 473 aaKnown RBP2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 TMEM81Q6P7N7 255 aa2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 C15orf39Q6ZRI6 1047 aa2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 STXBP4Q6ZWJ1 553 aa2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 TMCO2Q7Z6W1 182 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 DEFB128Q7Z7B8 93 aa2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 GTSCR1Q86UQ5 136 aa2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 APLFQ8IW19 511 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 LYG1Q8N1E2 194 aa2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 PCDH20Q8N6Y1 951 aaKnown RBP2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 TRIM58Q8NG06 486 aa2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 HCAR2Q8TDS4 363 aa2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 NOC3LQ8WTT2 800 aaKnown RBP2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 TCEAL3Q969E4 200 aa2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 QRFPRQ96P65 431 aa2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 HEMGNQ9BXL5 484 aa2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 PLEKHA4Q9H4M7 779 aa2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 OGFRQ9NZT2 677 aa2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 ERVK-11Q9UQG0 969 aa2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 DOCK2Q92608 1830 aa2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 PTPRCP08575 1304 aa2.68□□□□□ -1.98
HMGB1P18-201ENST00000438801 LOC101059948A0A1B0GTJ6 334 aa2.67□□□□□ -1.98
HMGB1P18-201ENST00000438801 NR5A2O00482 541 aa2.67□□□□□ -1.98
HMGB1P18-201ENST00000438801 PRKNO60260 465 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P18-201ENST00000438801 IGLV1-44P01699 117 aa2.67□□□□□ -1.98
HMGB1P18-201ENST00000438801 FAM106CPP0CH98 169 aa2.67□□□□□ -1.98
HMGB1P18-201ENST00000438801 PRSS56P0CW18 603 aa2.67□□□□□ -1.98
HMGB1P18-201ENST00000438801 POLR2CP19387 275 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P18-201ENST00000438801 ZNF10P21506 573 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P18-201ENST00000438801 RGS2P41220 211 aa2.67□□□□□ -1.98
HMGB1P18-201ENST00000438801 SORDQ00796 357 aa2.67□□□□□ -1.98
HMGB1P18-201ENST00000438801 FOXM1Q08050 763 aa2.67□□□□□ -1.98
HMGB1P18-201ENST00000438801 NAE1Q13564 534 aa2.67□□□□□ -1.98
HMGB1P18-201ENST00000438801 UBE4AQ14139 1066 aa2.67□□□□□ -1.98
HMGB1P18-201ENST00000438801 RNPS1Q15287 305 aaKnown RBP2.67□□□□□ -1.98
HMGB1P18-201ENST00000438801 TXNDC8Q6A555 127 aa2.67□□□□□ -1.98
HMGB1P18-201ENST00000438801 BRAT1Q6PJG6 821 aa2.67□□□□□ -1.98
HMGB1P18-201ENST00000438801 Q71RC1 249 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P18-201ENST00000438801 SLC46A3Q7Z3Q1 461 aa2.67□□□□□ -1.98
HMGB1P18-201ENST00000438801 OR52I2Q8NH67 350 aa2.67□□□□□ -1.98
HMGB1P18-201ENST00000438801 TMEM190Q8WZ59 177 aa2.67□□□□□ -1.98
HMGB1P18-201ENST00000438801 SUSD6Q92537 303 aa2.67□□□□□ -1.98
HMGB1P18-201ENST00000438801 LINGO1Q96FE5 620 aa2.67□□□□□ -1.98
HMGB1P18-201ENST00000438801 SLC39A13Q96H72 371 aa2.67□□□□□ -1.98
HMGB1P18-201ENST00000438801 SLC41A2Q96JW4 573 aa2.67□□□□□ -1.98
HMGB1P18-201ENST00000438801 DCTN5Q9BTE1 182 aa2.67□□□□□ -1.98
HMGB1P18-201ENST00000438801 SLC52A3Q9NQ40 469 aa2.67□□□□□ -1.98
HMGB1P18-201ENST00000438801 C20orf141Q9NUB4 165 aa2.67□□□□□ -1.98
HMGB1P18-201ENST00000438801 HSPB7Q9UBY9 170 aa2.67□□□□□ -1.98
HMGB1P18-201ENST00000438801 POLG2Q9UHN1 485 aa2.67□□□□□ -1.98
HMGB1P18-201ENST00000438801 RNF215Q9Y6U7 377 aa2.67□□□□□ -1.98
HMGB1P18-201ENST00000438801 PSME4Q14997 1843 aa2.67□□□□□ -1.98
HMGB1P18-201ENST00000438801 PTPRBP23467 1997 aa2.67□□□□□ -1.98
HMGB1P18-201ENST00000438801 TRABD2BA6NFA1 517 aa2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 KRTAP16-1A8MUX0 517 aa2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 CIDEAO60543 219 aa2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 CAVIN2O95810 425 aa2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 FTCDO95954 541 aa2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 IRF1P10914 325 aa2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 GNB3P16520 340 aa2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 GRK6P43250 576 aa2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 AMPHP49418 695 aa2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 LMO4P61968 165 aa2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 CSNK2A1P68400 391 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 IRX1P78414 480 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 GRIK2Q13002 908 aa2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 EPC2Q52LR7 807 aa2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 ZNF766Q5HY98 468 aa2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 FBXO47Q5MNV8 452 aa2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 FRG2Q64ET8 278 aa2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 ZNF280DQ6N043 979 aa2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 RAD9BQ6WBX8 426 aa2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 QSOX2Q6ZRP7 698 aa2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 TRPT1Q86TN4 253 aaKnown RBP2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 SAMD3Q8N6K7 520 aa2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 ENAHQ8N8S7 591 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 CSNK2A3Q8NEV1 391 aa2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 OR5R1Q8NH85 324 aa2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 WDR20Q8TBZ3 569 aa2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 ORAI1Q96D31 301 aa2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 ATOH8Q96SQ7 321 aa2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 RAD9AQ99638 391 aa2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 EGFL8Q99944 293 aa2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 FAM110AQ9BQ89 295 aa2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 PYM1Q9BRP8 204 aaKnown RBP2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 NYXQ9GZU5 481 aa2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 TKTL2Q9H0I9 626 aa2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 TMEM9BQ9NQ34 198 aa2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 ACSL5Q9ULC5 683 aa2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 DUSP12Q9UNI6 340 aa2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 C2CD2Q9Y426 696 aa2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 CNTRLQ7Z7A1 2325 aa2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 NLRC5Q86WI3 1866 aa2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 VPS8Q8N3P4 1428 aa2.66□□□□□ -1.98
HMGB1P18-201ENST00000438801 ECM29Q5VYK3 1845 aa2.65□□□□□ -1.98
HMGB1P18-201ENST00000438801 CACNA1FO60840 1977 aa2.65□□□□□ -1.98
HMGB1P18-201ENST00000438801 A0A1W2PP64 1363 aa2.65□□□□□ -1.98
HMGB1P18-201ENST00000438801 ZCWPW2A0A1B0GU75 182 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms