RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 SMIM11AP58511 58 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 BTG3Q14201 252 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-205ENST00000438362 SYT16Q17RD7 645 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 UBXN11Q5T124 520 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 PIK3R6Q5UE93 754 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 LUZP2Q86TE4 346 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 CHERPQ8IWX8 916 aaKnown RBP6.56□□□□□ -1.36
CSDE1-205ENST00000438362 LSMEM2Q8N112 164 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 CLDN19Q8N6F1 224 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 ZBTB8BQ8NAP8 495 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-205ENST00000438362 OR8J3Q8NGG0 315 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 FAR1Q8WVX9 515 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 TADA1Q96BN2 335 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 QRFPRQ96P65 431 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 MAGEE1Q9HCI5 957 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 AMBNQ9NP70 447 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 AASDHPPTQ9NRN7 309 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 TREX1Q9NSU2 369 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.56□□□□□ -1.36
CSDE1-205ENST00000438362 RUVBL1Q9Y265 456 aaKnown RBP6.56□□□□□ -1.36
CSDE1-205ENST00000438362 WBP11Q9Y2W2 641 aaKnown RBP6.56□□□□□ -1.36
CSDE1-205ENST00000438362 TESMINQ9Y4I5 508 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 GPC6Q9Y625 555 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-205ENST00000438362 USP3Q9Y6I4 520 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 CEPT1Q9Y6K0 416 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 COL16A1Q07092 1604 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-205ENST00000438362 C7orf72A4D263 438 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 LOC730098B7Z3J9 87 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 DFNA5O60443 496 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 PQBP1O60828 265 aaKnown RBP6.55□□□□□ -1.36
CSDE1-205ENST00000438362 CCNKO75909 580 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 CCNDBP1O95273 360 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 C8GP07360 202 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 PRPS1L1P21108 318 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 GPX3P22352 226 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 SLC5A2P31639 672 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 ATN1P54259 1190 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-205ENST00000438362 UGT2B15P54855 530 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 PMS2P3Q13401 168 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 PLEKHG6Q3KR16 790 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 GPR33Q49SQ1 333 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 ADGRF1Q5T601 910 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 ZDHHC20Q5W0Z9 365 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 PDE12Q6L8Q7 609 aaKnown RBP6.55□□□□□ -1.36
CSDE1-205ENST00000438362 NUDT18Q6ZVK8 323 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 NEK10Q6ZWH5 1172 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 ARHGAP12Q8IWW6 846 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 KRT78Q8N1N4 520 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 ZNF557Q8N988 423 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-205ENST00000438362 WDR36Q8NI36 951 aaKnown RBP6.55□□□□□ -1.36
CSDE1-205ENST00000438362 IGSF8Q969P0 613 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 PTERQ96BW5 349 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 TIFAQ96CG3 184 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 PYURFQ96I23 114 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 LRCH3Q96II8 777 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 PSKH2Q96QS6 385 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 BBS4Q96RK4 519 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 SEZ6LQ9BYH1 1024 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 TNKS2Q9H2K2 1166 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 CDV3Q9UKY7 258 aaKnown RBP6.55□□□□□ -1.36
CSDE1-205ENST00000438362 SSR3Q9UNL2 185 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 RBMX2Q9Y388 322 aaKnown RBP6.55□□□□□ -1.36
CSDE1-205ENST00000438362 PEX16Q9Y5Y5 336 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 SHANK3Q9BYB0 1731 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 TRAV19A0A0A6YYK7 116 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 A0A0D9SEW6 157 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 TRIM43BA6NCK2 446 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 SEPT4O43236 478 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 POLR2EP19388 210 aaKnown RBP6.55□□□□□ -1.36
CSDE1-205ENST00000438362 IFNGR2P38484 337 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 RPS7P62081 194 aaKnown RBP6.55□□□□□ -1.36
CSDE1-205ENST00000438362 IL18R1Q13478 541 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 PTGR1Q14914 329 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 TEAD4Q15561 434 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 C11orf91Q3C1V1 193 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 MARCH8Q5T0T0 291 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 KANK2Q63ZY3 851 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 NIPAL1Q6NVV3 410 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 KDELC1Q6UW63 502 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 UTS2BQ765I0 119 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 CCDC80Q76M96 950 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 ADGRG5Q8IZF4 528 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 SLC34A3Q8N130 599 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 TMEM102Q8N9M5 508 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-205ENST00000438362 MFSD2AQ8NA29 543 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 OR10Q1Q8NGQ4 319 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 RNFT2Q96EX2 444 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 TCF25Q9BQ70 676 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 SLC29A3Q9BZD2 475 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 SLC32A1Q9H598 525 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 GKN1Q9NS71 199 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 PGAP2Q9UHJ9 254 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 PCDHGB3Q9Y5G1 929 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 STRCQ7RTU9 1775 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 SLX4Q8IY92 1834 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 MBLAC1A4D2B0 266 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-205ENST00000438362 ZNF701M0R085 212 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-205ENST00000438362 AP1G1O43747 822 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 ALPIP09923 528 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 EBLN1P0CF75 366 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms