RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 ARL8BQ9NVJ2 186 aa15.58■□□□□ 0.08
PTPN13-204ENST00000436978 COQ9O75208 318 aa15.58■□□□□ 0.08
PTPN13-204ENST00000436978 TRIM3O75382 744 aaPredicted RBP15.58■□□□□ 0.08
PTPN13-204ENST00000436978 RENP00797 406 aa15.58■□□□□ 0.08
PTPN13-204ENST00000436978 TIE1P35590 1138 aa15.58■□□□□ 0.08
PTPN13-204ENST00000436978 IDH3AP50213 366 aa15.58■□□□□ 0.08
PTPN13-204ENST00000436978 CCL14Q16627 93 aa15.58■□□□□ 0.08
PTPN13-204ENST00000436978 FAM131AQ6UXB0 335 aa15.58■□□□□ 0.08
PTPN13-204ENST00000436978 ZZZ3Q8IYH5 903 aa15.58■□□□□ 0.08
PTPN13-204ENST00000436978 CRYBG2Q8N1P7 616 aa15.58■□□□□ 0.08
PTPN13-204ENST00000436978 PDPRQ8NCN5 879 aa15.58■□□□□ 0.08
PTPN13-204ENST00000436978 PSKH2Q96QS6 385 aa15.58■□□□□ 0.08
PTPN13-204ENST00000436978 TIMMDC1Q9NPL8 285 aa15.58■□□□□ 0.08
PTPN13-204ENST00000436978 CFL2Q9Y281 166 aa15.58■□□□□ 0.08
PTPN13-204ENST00000436978 PCDHB11Q9Y5F2 797 aa15.58■□□□□ 0.08
PTPN13-204ENST00000436978 PIP5K1BO14986 540 aa15.58■□□□□ 0.08
PTPN13-204ENST00000436978 HLA-DQB2P05538 268 aa15.58■□□□□ 0.08
PTPN13-204ENST00000436978 CRISP3P54108 245 aa15.58■□□□□ 0.08
PTPN13-204ENST00000436978 RBBP4Q09028 425 aa15.58■□□□□ 0.08
PTPN13-204ENST00000436978 ALKBH2Q6NS38 261 aa15.58■□□□□ 0.08
PTPN13-204ENST00000436978 POC5Q8NA72 575 aa15.58■□□□□ 0.08
PTPN13-204ENST00000436978 MARK1Q9P0L2 795 aa15.58■□□□□ 0.08
PTPN13-204ENST00000436978 THRBP10828 461 aa15.58■□□□□ 0.08
PTPN13-204ENST00000436978 ZNF33AQ06730 810 aa15.58■□□□□ 0.08
PTPN13-204ENST00000436978 RASGEF1BQ0VAM2 473 aa15.58■□□□□ 0.08
PTPN13-204ENST00000436978 C1GALT1C1Q96EU7 318 aa15.58■□□□□ 0.08
PTPN13-204ENST00000436978 ART5Q96L15 291 aa15.58■□□□□ 0.08
PTPN13-204ENST00000436978 RETREG1Q9H6L5 497 aa15.58■□□□□ 0.08
PTPN13-204ENST00000436978 CHRNA1P02708 482 aa15.58■□□□□ 0.08
PTPN13-204ENST00000436978 TMEM63BQ5T3F8 832 aa15.58■□□□□ 0.08
PTPN13-204ENST00000436978 SLC29A4Q7RTT9 530 aa15.58■□□□□ 0.08
PTPN13-204ENST00000436978 RASGRP3Q8IV61 690 aa15.58■□□□□ 0.08
PTPN13-204ENST00000436978 DZANK1Q9NVP4 752 aa15.58■□□□□ 0.08
PTPN13-204ENST00000436978 SNED1Q8TER0 1413 aa15.57■□□□□ 0.08
PTPN13-204ENST00000436978 RBMXL2O75526 392 aaKnown RBP15.57■□□□□ 0.08
PTPN13-204ENST00000436978 IFI44LQ53G44 452 aa15.57■□□□□ 0.08
PTPN13-204ENST00000436978 CXorf57Q6NSI4 855 aaKnown RBP15.57■□□□□ 0.08
PTPN13-204ENST00000436978 ZNF781Q8N8C0 355 aa15.57■□□□□ 0.08
PTPN13-204ENST00000436978 NSMCE3Q96MG7 304 aa15.57■□□□□ 0.08
PTPN13-204ENST00000436978 ZNF304Q9HCX3 659 aa15.57■□□□□ 0.08
PTPN13-204ENST00000436978 A0A0U1RQF3 1178 aa15.57■□□□□ 0.08
PTPN13-204ENST00000436978 DNM1LO00429 736 aa15.57■□□□□ 0.08
PTPN13-204ENST00000436978 ZNF3P17036 446 aa15.57■□□□□ 0.08
PTPN13-204ENST00000436978 KLHL22Q53GT1 634 aa15.57■□□□□ 0.08
PTPN13-204ENST00000436978 ANKRD22Q5VYY1 191 aa15.57■□□□□ 0.08
PTPN13-204ENST00000436978 OLFML2AQ68BL7 652 aa15.57■□□□□ 0.08
PTPN13-204ENST00000436978 BCO2Q9BYV7 579 aa15.57■□□□□ 0.08
PTPN13-204ENST00000436978 FANCFQ9NPI8 374 aa15.57■□□□□ 0.08
PTPN13-204ENST00000436978 WBP11Q9Y2W2 641 aaKnown RBP15.57■□□□□ 0.08
PTPN13-204ENST00000436978 ZBTB22O15209 634 aa15.57■□□□□ 0.08
PTPN13-204ENST00000436978 RPS6KA3P51812 740 aa15.57■□□□□ 0.08
PTPN13-204ENST00000436978 NMUR2Q9GZQ4 415 aa15.57■□□□□ 0.08
PTPN13-204ENST00000436978 CLDND1Q9NY35 253 aa15.57■□□□□ 0.08
PTPN13-204ENST00000436978 MAST2Q6P0Q8 1798 aa15.57■□□□□ 0.08
PTPN13-204ENST00000436978 TRBV23OR9-2A0A075B6M9 112 aa15.57■□□□□ 0.08
PTPN13-204ENST00000436978 FAM25EA8MYX2 175 aa15.57■□□□□ 0.08
PTPN13-204ENST00000436978 SERPINA3P01011 423 aa15.57■□□□□ 0.08
PTPN13-204ENST00000436978 PGDP52209 483 aa15.57■□□□□ 0.08
PTPN13-204ENST00000436978 LSM3P62310 102 aaKnown RBP15.57■□□□□ 0.08
PTPN13-204ENST00000436978 FAM174BQ3ZCQ3 159 aa15.57■□□□□ 0.08
PTPN13-204ENST00000436978 SAPCD2Q86UD0 394 aa15.57■□□□□ 0.08
PTPN13-204ENST00000436978 OR2AJ1Q8NGZ0 328 aa15.57■□□□□ 0.08
PTPN13-204ENST00000436978 PACSIN3Q9UKS6 424 aa15.57■□□□□ 0.08
PTPN13-204ENST00000436978 PDCD5O14737 125 aa15.57■□□□□ 0.08
PTPN13-204ENST00000436978 PTGIRP43119 386 aa15.57■□□□□ 0.08
PTPN13-204ENST00000436978 AP1S2P56377 157 aa15.57■□□□□ 0.08
PTPN13-204ENST00000436978 DMPKQ09013 629 aa15.57■□□□□ 0.08
PTPN13-204ENST00000436978 SIRPB2Q5JXA9 342 aa15.57■□□□□ 0.08
PTPN13-204ENST00000436978 C10orf71Q711Q0 1435 aa15.57■□□□□ 0.08
PTPN13-204ENST00000436978 ATP1B2P14415 290 aaPredicted RBP15.57■□□□□ 0.08
PTPN13-204ENST00000436978 ACVR2AP27037 513 aa15.57■□□□□ 0.08
PTPN13-204ENST00000436978 CCND3P30281 292 aaPredicted RBP15.57■□□□□ 0.08
PTPN13-204ENST00000436978 ENPP7Q6UWV6 458 aa15.57■□□□□ 0.08
PTPN13-204ENST00000436978 BRI3BPQ8WY22 251 aa15.57■□□□□ 0.08
PTPN13-204ENST00000436978 MGME1Q9BQP7 344 aa15.57■□□□□ 0.08
PTPN13-204ENST00000436978 NEMP2A6NFY4 417 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 OR4F21O95013 312 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 PRAMEF12O95522 483 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 ERVK-8P63133 956 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 KLHL26Q53HC5 615 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 FAM47BQ8NA70 645 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 NDC1Q9BTX1 674 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 SERINC1Q9NRX5 453 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 UPB1Q9UBR1 384 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 TCRBV7S2A1N4TA0A589 114 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 PCDH7O60245 1069 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 ZNF823P16415 610 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 RPS14P62263 151 aaKnown RBP15.56■□□□□ 0.08
PTPN13-204ENST00000436978 GPR151Q8TDV0 419 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 CLCA3PQ9Y6N3 262 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 A0A1W2PQ45 241 aaPredicted RBP15.56■□□□□ 0.08
PTPN13-204ENST00000436978 A0A1W2PQY0 241 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 CXCR6O00574 342 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 PLIN3O60664 434 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 SCLYQ96I15 445 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 DUSP26Q9BV47 211 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 OAS3Q9Y6K5 1087 aaKnown RBP15.56■□□□□ 0.08
PTPN13-204ENST00000436978 UPK3BL1B0FP48 263 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 UPK3BL2E5RIL1 263 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 DGKEP52429 567 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms