RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 TRIT1Q9H3H1 467 aaKnown RBP22.41■■□□□ 1.18
CPSF4-204ENST00000436336 ERVMER34-1Q9H9K5 563 aa22.41■■□□□ 1.18
CPSF4-204ENST00000436336 WWOXQ9NZC7 414 aa22.41■■□□□ 1.18
CPSF4-204ENST00000436336 SDK1Q7Z5N4 2213 aa22.41■■□□□ 1.18
CPSF4-204ENST00000436336 A0A1B0GVT2 93 aa22.4■■□□□ 1.18
CPSF4-204ENST00000436336 GMNCA6NCL1 334 aa22.4■■□□□ 1.18
CPSF4-204ENST00000436336 MYO1CO00159 1063 aa22.4■■□□□ 1.18
CPSF4-204ENST00000436336 TAPBPO15533 448 aa22.4■■□□□ 1.18
CPSF4-204ENST00000436336 SNNO75324 88 aaPredicted RBP22.4■■□□□ 1.18
CPSF4-204ENST00000436336 VIMP08670 466 aaKnown RBP22.4■■□□□ 1.18
CPSF4-204ENST00000436336 F3P13726 295 aa22.4■■□□□ 1.18
CPSF4-204ENST00000436336 EEF1DP29692 281 aaKnown RBP22.4■■□□□ 1.18
CPSF4-204ENST00000436336 HOXD12P35452 270 aa22.4■■□□□ 1.18
CPSF4-204ENST00000436336 SLC1A6P48664 564 aa22.4■■□□□ 1.18
CPSF4-204ENST00000436336 HNRNPKP61978 463 aaKnown RBP eCLIP22.4■■□□□ 1.183e-6■■■■□ 21
CPSF4-204ENST00000436336 PCBP2Q15366 365 aaKnown RBP eCLIP22.4■■□□□ 1.18
CPSF4-204ENST00000436336 ELOCQ15369 112 aa22.4■■□□□ 1.18
CPSF4-204ENST00000436336 CCSMST1Q4G0I0 132 aa22.4■■□□□ 1.18
CPSF4-204ENST00000436336 PRRT3Q5FWE3 981 aa22.4■■□□□ 1.18
CPSF4-204ENST00000436336 OR5AR1Q8NGP9 310 aa22.4■■□□□ 1.18
CPSF4-204ENST00000436336 UBTD2Q8WUN7 234 aa22.4■■□□□ 1.18
CPSF4-204ENST00000436336 PIGKQ92643 395 aa22.4■■□□□ 1.18
CPSF4-204ENST00000436336 FBXL8Q96CD0 374 aa22.4■■□□□ 1.18
CPSF4-204ENST00000436336 CNDP1Q96KN2 507 aa22.4■■□□□ 1.18
CPSF4-204ENST00000436336 DRC3Q9H069 523 aa22.4■■□□□ 1.18
CPSF4-204ENST00000436336 CAAP1Q9H8G2 361 aa22.4■■□□□ 1.18
CPSF4-204ENST00000436336 THAP1Q9NVV9 213 aa22.4■■□□□ 1.18
CPSF4-204ENST00000436336 HEBP2Q9Y5Z4 205 aa22.4■■□□□ 1.18
CPSF4-204ENST00000436336 CFAP20Q9Y6A4 193 aaKnown RBP22.4■■□□□ 1.18
CPSF4-204ENST00000436336 A6NCN8 305 aa22.4■■□□□ 1.18
CPSF4-204ENST00000436336 SUPT7LO94864 414 aa22.4■■□□□ 1.18
CPSF4-204ENST00000436336 RPS17P08708 135 aaKnown RBP22.4■■□□□ 1.18
CPSF4-204ENST00000436336 CTSKP43235 329 aa22.4■■□□□ 1.18
CPSF4-204ENST00000436336 AGTR2P50052 363 aa22.4■■□□□ 1.18
CPSF4-204ENST00000436336 ABCE1P61221 599 aaKnown RBP22.4■■□□□ 1.18
CPSF4-204ENST00000436336 RCN2Q14257 317 aa22.4■■□□□ 1.18
CPSF4-204ENST00000436336 RPE65Q16518 533 aa22.4■■□□□ 1.18
CPSF4-204ENST00000436336 UNC50Q53HI1 259 aa22.4■■□□□ 1.18
CPSF4-204ENST00000436336 ANKS6Q68DC2 871 aa22.4■■□□□ 1.18
CPSF4-204ENST00000436336 METTL2BQ6P1Q9 378 aaKnown RBP22.4■■□□□ 1.18
CPSF4-204ENST00000436336 TAF8Q7Z7C8 310 aa22.4■■□□□ 1.18
CPSF4-204ENST00000436336 PHC3Q8NDX5 983 aa22.4■■□□□ 1.18
CPSF4-204ENST00000436336 ATL1Q8WXF7 558 aa22.4■■□□□ 1.18
CPSF4-204ENST00000436336 PKP4Q99569 1192 aa22.4■■□□□ 1.18
CPSF4-204ENST00000436336 TMEM79Q9BSE2 394 aa22.4■■□□□ 1.18
CPSF4-204ENST00000436336 IMP3Q9NV31 184 aaKnown RBP22.4■■□□□ 1.18
CPSF4-204ENST00000436336 TAAR2Q9P1P5 351 aa22.4■■□□□ 1.18
CPSF4-204ENST00000436336 SPASTQ9UBP0 616 aa22.4■■□□□ 1.18
CPSF4-204ENST00000436336 CACNA1EQ15878 2313 aa22.39■■□□□ 1.18
CPSF4-204ENST00000436336 EML2O95834 649 aa22.39■■□□□ 1.17
CPSF4-204ENST00000436336 MTHFD1P11586 935 aaKnown RBP22.39■■□□□ 1.17
CPSF4-204ENST00000436336 GGT5P36269 586 aa22.39■■□□□ 1.17
CPSF4-204ENST00000436336 SEC24CP53992 1094 aa22.39■■□□□ 1.17
CPSF4-204ENST00000436336 PRR23BQ6ZRT6 265 aa22.39■■□□□ 1.17
CPSF4-204ENST00000436336 RABEPKQ7Z6M1 372 aa22.39■■□□□ 1.17
CPSF4-204ENST00000436336 LRRC34Q8IZ02 419 aa22.39■■□□□ 1.17
CPSF4-204ENST00000436336 OR9A1PQ8NGU1 263 aa22.39■■□□□ 1.17
CPSF4-204ENST00000436336 MOCOSQ96EN8 888 aa22.39■■□□□ 1.17
CPSF4-204ENST00000436336 FERD3LQ96RJ6 166 aa22.39■■□□□ 1.17
CPSF4-204ENST00000436336 CD244Q9BZW8 370 aa22.39■■□□□ 1.17
CPSF4-204ENST00000436336 EPN3Q9H201 632 aa22.39■■□□□ 1.17
CPSF4-204ENST00000436336 GSTO2Q9H4Y5 243 aa22.39■■□□□ 1.17
CPSF4-204ENST00000436336 MVB12BQ9H7P6 319 aa22.39■■□□□ 1.17
CPSF4-204ENST00000436336 SLCO1B3Q9NPD5 702 aa22.39■■□□□ 1.17
CPSF4-204ENST00000436336 SCHIP1Q9P0W5 487 aaPredicted RBP22.39■■□□□ 1.17
CPSF4-204ENST00000436336 ZNF318Q5VUA4 2279 aa22.38■■□□□ 1.17
CPSF4-204ENST00000436336 OR52A4PA6NMU1 304 aa22.38■■□□□ 1.17
CPSF4-204ENST00000436336 CELA2BP08218 269 aaPredicted RBP22.38■■□□□ 1.17
CPSF4-204ENST00000436336 OCRLQ01968 901 aa22.38■■□□□ 1.17
CPSF4-204ENST00000436336 C1orf61Q13536 156 aa22.38■■□□□ 1.17
CPSF4-204ENST00000436336 KIF19Q2TAC6 998 aa22.38■■□□□ 1.17
CPSF4-204ENST00000436336 FBXO48Q5FWF7 155 aa22.38■■□□□ 1.17
CPSF4-204ENST00000436336 DUS1LQ6P1R4 473 aaKnown RBP22.38■■□□□ 1.17
CPSF4-204ENST00000436336 FRMD7Q6ZUT3 714 aa22.38■■□□□ 1.17
CPSF4-204ENST00000436336 FAM47EQ6ZV65 393 aa22.38■■□□□ 1.17
CPSF4-204ENST00000436336 SDR16C5Q8N3Y7 309 aa22.38■■□□□ 1.17
CPSF4-204ENST00000436336 PPP4R1Q8TF05 950 aa22.38■■□□□ 1.17
CPSF4-204ENST00000436336 ESAMQ96AP7 390 aa22.38■■□□□ 1.17
CPSF4-204ENST00000436336 C7orf26Q96N11 449 aa22.38■■□□□ 1.17
CPSF4-204ENST00000436336 TRMOQ9BU70 441 aa22.38■■□□□ 1.17
CPSF4-204ENST00000436336 C20orf27Q9GZN8 174 aa22.38■■□□□ 1.17
CPSF4-204ENST00000436336 ACSS2Q9NR19 701 aa22.38■■□□□ 1.17
CPSF4-204ENST00000436336 PSD3Q9NYI0 1048 aa22.38■■□□□ 1.17
CPSF4-204ENST00000436336 STOX2Q9P2F5 926 aaPredicted RBP22.38■■□□□ 1.17
CPSF4-204ENST00000436336 POLG2Q9UHN1 485 aa22.38■■□□□ 1.17
CPSF4-204ENST00000436336 KNL1Q8NG31 2342 aa22.37■■□□□ 1.17
CPSF4-204ENST00000436336 KRT87PA6NCN2 255 aa22.37■■□□□ 1.17
CPSF4-204ENST00000436336 LRRC14BA6NHZ5 514 aa22.37■■□□□ 1.17
CPSF4-204ENST00000436336 ITM2AO43736 263 aa22.37■■□□□ 1.17
CPSF4-204ENST00000436336 EDF1O60869 148 aaKnown RBP22.37■■□□□ 1.17
CPSF4-204ENST00000436336 SNUPNO95149 360 aaKnown RBP22.37■■□□□ 1.17
CPSF4-204ENST00000436336 HSPA7P48741 367 aa22.37■■□□□ 1.17
CPSF4-204ENST00000436336 GRB7Q14451 532 aa22.37■■□□□ 1.17
CPSF4-204ENST00000436336 C18orf21Q32NC0 220 aaPredicted RBP22.37■■□□□ 1.17
CPSF4-204ENST00000436336 GKN2Q86XP6 184 aa22.37■■□□□ 1.17
CPSF4-204ENST00000436336 PITPNM3Q9BZ71 974 aa22.37■■□□□ 1.17
CPSF4-204ENST00000436336 PCTPQ9UKL6 214 aa22.37■■□□□ 1.17
CPSF4-204ENST00000436336 SNX11Q9Y5W9 270 aa22.37■■□□□ 1.17
CPSF4-204ENST00000436336 COLEC10Q9Y6Z7 277 aa22.37■■□□□ 1.17
CPSF4-204ENST00000436336 ADAMTS9Q9P2N4 1935 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms