RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 CCDC138Q96M89 665 aa25.77■■□□□ 1.72
TMEM248-205ENST00000433271 ERVK-6Q9BXR3 956 aa25.77■■□□□ 1.72
TMEM248-205ENST00000433271 IMP3Q9NV31 184 aaKnown RBP25.77■■□□□ 1.72
TMEM248-205ENST00000433271 PTBP2Q9UKA9 531 aaKnown RBP25.77■■□□□ 1.72
TMEM248-205ENST00000433271 FANCMQ8IYD8 2048 aa25.77■■□□□ 1.72
TMEM248-205ENST00000433271 TDRD6O60522 2096 aaKnown RBP25.77■■□□□ 1.72
TMEM248-205ENST00000433271 OR52A4PA6NMU1 304 aa25.77■■□□□ 1.72
TMEM248-205ENST00000433271 MYO1CO00159 1063 aa25.77■■□□□ 1.72
TMEM248-205ENST00000433271 H2AFYO75367 372 aaKnown RBP25.77■■□□□ 1.72
TMEM248-205ENST00000433271 MTHFD1P11586 935 aaKnown RBP25.77■■□□□ 1.72
TMEM248-205ENST00000433271 RXRGP48443 463 aa25.77■■□□□ 1.72
TMEM248-205ENST00000433271 HNMTP50135 292 aa25.77■■□□□ 1.72
TMEM248-205ENST00000433271 NAGLUP54802 743 aa25.77■■□□□ 1.72
TMEM248-205ENST00000433271 SETDB1Q15047 1291 aa25.77■■□□□ 1.72
TMEM248-205ENST00000433271 MBOAT1Q6ZNC8 495 aa25.77■■□□□ 1.72
TMEM248-205ENST00000433271 RGS9BPQ6ZS82 235 aa25.77■■□□□ 1.72
TMEM248-205ENST00000433271 TCAIMQ8N3R3 496 aa25.77■■□□□ 1.72
TMEM248-205ENST00000433271 ZNF548Q8NEK5 533 aaPredicted RBP25.77■■□□□ 1.72
TMEM248-205ENST00000433271 L3HYPDHQ96EM0 354 aa25.77■■□□□ 1.72
TMEM248-205ENST00000433271 TMEM237Q96Q45 408 aa25.77■■□□□ 1.72
TMEM248-205ENST00000433271 ELF4Q99607 663 aaPredicted RBP25.77■■□□□ 1.72
TMEM248-205ENST00000433271 LRFN3Q9BTN0 628 aa25.77■■□□□ 1.72
TMEM248-205ENST00000433271 CUL9Q8IWT3 2517 aa25.76■■□□□ 1.71
TMEM248-205ENST00000433271 KLF11O14901 512 aa25.76■■□□□ 1.71
TMEM248-205ENST00000433271 PIAS2O75928 621 aa25.76■■□□□ 1.71
TMEM248-205ENST00000433271 SERPINE1P05121 402 aa25.76■■□□□ 1.71
TMEM248-205ENST00000433271 CFIP05156 583 aa25.76■■□□□ 1.71
TMEM248-205ENST00000433271 GRK2P25098 689 aa25.76■■□□□ 1.71
TMEM248-205ENST00000433271 ARRB1P49407 418 aaPredicted RBP25.76■■□□□ 1.71
TMEM248-205ENST00000433271 CCSMST1Q4G0I0 132 aa25.76■■□□□ 1.71
TMEM248-205ENST00000433271 IYDQ6PHW0 289 aa25.76■■□□□ 1.71
TMEM248-205ENST00000433271 RAD51AP1Q96B01 352 aa25.76■■□□□ 1.71
TMEM248-205ENST00000433271 FERD3LQ96RJ6 166 aa25.76■■□□□ 1.71
TMEM248-205ENST00000433271 PKP4Q99569 1192 aa25.76■■□□□ 1.71
TMEM248-205ENST00000433271 GATA5Q9BWX5 397 aaPredicted RBP25.76■■□□□ 1.71
TMEM248-205ENST00000433271 MVB12BQ9H7P6 319 aa25.76■■□□□ 1.71
TMEM248-205ENST00000433271 CAPN10Q9HC96 672 aa25.76■■□□□ 1.71
TMEM248-205ENST00000433271 TNPO3Q9Y5L0 923 aaKnown RBP25.76■■□□□ 1.71
TMEM248-205ENST00000433271 CACNA1HO95180 2353 aa25.75■■□□□ 1.71
TMEM248-205ENST00000433271 OR5K4A6NMS3 321 aa25.75■■□□□ 1.71
TMEM248-205ENST00000433271 AQP9O43315 295 aa25.75■■□□□ 1.71
TMEM248-205ENST00000433271 ATG16L1Q676U5 607 aa25.75■■□□□ 1.71
TMEM248-205ENST00000433271 SLC23A3Q6PIS1 610 aa25.75■■□□□ 1.71
TMEM248-205ENST00000433271 ZCCHC23Q6ZST2 131 aa25.75■■□□□ 1.71
TMEM248-205ENST00000433271 FAM46DQ8NEK8 389 aa25.75■■□□□ 1.71
TMEM248-205ENST00000433271 OR9A1PQ8NGU1 263 aa25.75■■□□□ 1.71
TMEM248-205ENST00000433271 ATL1Q8WXF7 558 aa25.75■■□□□ 1.71
TMEM248-205ENST00000433271 FBXL8Q96CD0 374 aa25.75■■□□□ 1.71
TMEM248-205ENST00000433271 POLG2Q9UHN1 485 aa25.75■■□□□ 1.71
TMEM248-205ENST00000433271 RAB23Q9ULC3 237 aa25.75■■□□□ 1.71
TMEM248-205ENST00000433271 PCDHGA5Q9Y5G8 931 aa25.75■■□□□ 1.71
TMEM248-205ENST00000433271 COLEC10Q9Y6Z7 277 aa25.75■■□□□ 1.71
TMEM248-205ENST00000433271 LMO7DNF2Z398 122 aa25.74■■□□□ 1.71
TMEM248-205ENST00000433271 TAPBPO15533 448 aa25.74■■□□□ 1.71
TMEM248-205ENST00000433271 EPN2O95208 641 aa25.74■■□□□ 1.71
TMEM248-205ENST00000433271 SLC2A4P14672 509 aa25.74■■□□□ 1.71
TMEM248-205ENST00000433271 AGTR2P50052 363 aa25.74■■□□□ 1.71
TMEM248-205ENST00000433271 GNGT1P63211 74 aa25.74■■□□□ 1.71
TMEM248-205ENST00000433271 GRIK2Q13002 908 aa25.74■■□□□ 1.71
TMEM248-205ENST00000433271 ZNF678Q5SXM1 525 aa25.74■■□□□ 1.71
TMEM248-205ENST00000433271 DUS1LQ6P1R4 473 aaKnown RBP25.74■■□□□ 1.71
TMEM248-205ENST00000433271 CCNYL1Q8N7R7 359 aa25.74■■□□□ 1.71
TMEM248-205ENST00000433271 PRRX2Q99811 253 aa25.74■■□□□ 1.71
TMEM248-205ENST00000433271 C1QTNF3Q9BXJ4 246 aa25.74■■□□□ 1.71
TMEM248-205ENST00000433271 ZNF624Q9P2J8 865 aaPredicted RBP25.74■■□□□ 1.71
TMEM248-205ENST00000433271 SLC6A14Q9UN76 642 aa25.74■■□□□ 1.71
TMEM248-205ENST00000433271 TP53BP1Q12888 1972 aaPredicted RBP25.74■■□□□ 1.71
TMEM248-205ENST00000433271 KRT87PA6NCN2 255 aa25.74■■□□□ 1.71
TMEM248-205ENST00000433271 YY2O15391 372 aa25.74■■□□□ 1.71
TMEM248-205ENST00000433271 SIX3O95343 332 aaPredicted RBP25.74■■□□□ 1.71
TMEM248-205ENST00000433271 NDUFS1P28331 727 aa25.74■■□□□ 1.71
TMEM248-205ENST00000433271 GGT5P36269 586 aa25.74■■□□□ 1.71
TMEM248-205ENST00000433271 PRKG2Q13237 762 aa25.74■■□□□ 1.71
TMEM248-205ENST00000433271 STX3Q13277 289 aa25.74■■□□□ 1.71
TMEM248-205ENST00000433271 KRT33BQ14525 404 aa25.74■■□□□ 1.71
TMEM248-205ENST00000433271 PCBP2Q15366 365 aaKnown RBP eCLIP25.74■■□□□ 1.712e-8■□□□□ 9.3
TMEM248-205ENST00000433271 ZNF423Q2M1K9 1284 aa25.74■■□□□ 1.71
TMEM248-205ENST00000433271 CFAP157Q5JU67 520 aa25.74■■□□□ 1.71
TMEM248-205ENST00000433271 UBTD2Q8WUN7 234 aa25.74■■□□□ 1.71
TMEM248-205ENST00000433271 WWOXQ9NZC7 414 aa25.74■■□□□ 1.71
TMEM248-205ENST00000433271 DOLKQ9UPQ8 538 aa25.74■■□□□ 1.71
TMEM248-205ENST00000433271 TDRKHQ9Y2W6 561 aaKnown RBP25.74■■□□□ 1.71
TMEM248-205ENST00000433271 ARHGEF17Q96PE2 2063 aaPredicted RBP25.74■■□□□ 1.71
TMEM248-205ENST00000433271 KIR2DS5A0A0G2JLQ3 304 aa25.73■■□□□ 1.71
TMEM248-205ENST00000433271 A0A0G2JNG1 304 aa25.73■■□□□ 1.71
TMEM248-205ENST00000433271 KIR2DS3K7RE56 304 aa25.73■■□□□ 1.71
TMEM248-205ENST00000433271 DFNA5O60443 496 aa25.73■■□□□ 1.71
TMEM248-205ENST00000433271 SLC16A8O95907 504 aa25.73■■□□□ 1.71
TMEM248-205ENST00000433271 EEF1DP29692 281 aaKnown RBP25.73■■□□□ 1.71
TMEM248-205ENST00000433271 LSP1P33241 339 aa25.73■■□□□ 1.71
TMEM248-205ENST00000433271 BST1Q10588 318 aa25.73■■□□□ 1.71
TMEM248-205ENST00000433271 GRB7Q14451 532 aa25.73■■□□□ 1.71
TMEM248-205ENST00000433271 KIR2DS5Q14953 304 aa25.73■■□□□ 1.71
TMEM248-205ENST00000433271 TRIM61Q5EBN2 209 aa25.73■■□□□ 1.71
TMEM248-205ENST00000433271 CES4AQ5XG92 561 aa25.73■■□□□ 1.71
TMEM248-205ENST00000433271 METTL2BQ6P1Q9 378 aaKnown RBP25.73■■□□□ 1.71
TMEM248-205ENST00000433271 IL27RAQ6UWB1 636 aa25.73■■□□□ 1.71
TMEM248-205ENST00000433271 STOX2Q9P2F5 926 aaPredicted RBP25.73■■□□□ 1.71
TMEM248-205ENST00000433271 CSNK1G3Q9Y6M4 447 aa25.73■■□□□ 1.71
TMEM248-205ENST00000433271 XRCC1P18887 633 aaPredicted RBP25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms