RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 GPN3Q9UHW5 284 aaPredicted RBP13.45□□□□□ -0.26
SEC13-211ENST00000431352 PACSIN2Q9UNF0 486 aaPredicted RBP13.45□□□□□ -0.26
SEC13-211ENST00000431352 A1L4Q6 167 aa13.44□□□□□ -0.26
SEC13-211ENST00000431352 GRID2IPA4D2P6 1211 aa13.44□□□□□ -0.26
SEC13-211ENST00000431352 CTSBP07858 339 aa13.44□□□□□ -0.26
SEC13-211ENST00000431352 CHRM5P08912 532 aaPredicted RBP13.44□□□□□ -0.26
SEC13-211ENST00000431352 MSL3P1P0C860 447 aa13.44□□□□□ -0.26
SEC13-211ENST00000431352 MSNP26038 577 aaKnown RBP13.44□□□□□ -0.26
SEC13-211ENST00000431352 SHMT2P34897 504 aa13.44□□□□□ -0.26
SEC13-211ENST00000431352 GDF10P55107 478 aa13.44□□□□□ -0.26
SEC13-211ENST00000431352 KCTD11Q693B1 232 aa13.44□□□□□ -0.26
SEC13-211ENST00000431352 UNC5AQ6ZN44 842 aa13.44□□□□□ -0.26
SEC13-211ENST00000431352 MED25Q71SY5 747 aa13.44□□□□□ -0.26
SEC13-211ENST00000431352 ZNF655Q8N720 491 aaPredicted RBP13.44□□□□□ -0.26
SEC13-211ENST00000431352 RBMXL3Q8N7X1 1067 aaKnown RBP13.44□□□□□ -0.26
SEC13-211ENST00000431352 ACRBPQ8NEB7 543 aa13.44□□□□□ -0.26
SEC13-211ENST00000431352 SSC4DQ8WTU2 575 aa13.44□□□□□ -0.26
SEC13-211ENST00000431352 CDKN2AIPNLQ96HQ2 116 aa13.44□□□□□ -0.26
SEC13-211ENST00000431352 LACRTQ9GZZ8 138 aa13.44□□□□□ -0.26
SEC13-211ENST00000431352 IMPACTQ9P2X3 320 aa13.44□□□□□ -0.26
SEC13-211ENST00000431352 DHCR7Q9UBM7 475 aaKnown RBP13.44□□□□□ -0.26
SEC13-211ENST00000431352 PLEKHB1Q9UF11 243 aaPredicted RBP13.44□□□□□ -0.26
SEC13-211ENST00000431352 CIDEBQ9UHD4 219 aa13.44□□□□□ -0.26
SEC13-211ENST00000431352 REXO2Q9Y3B8 237 aaKnown RBP13.44□□□□□ -0.26
SEC13-211ENST00000431352 PTRH2Q9Y3E5 179 aaKnown RBP13.44□□□□□ -0.26
SEC13-211ENST00000431352 EPN1Q9Y6I3 576 aaPredicted RBP13.44□□□□□ -0.26
SEC13-211ENST00000431352 ICE1Q9Y2F5 2266 aa13.44□□□□□ -0.26
SEC13-211ENST00000431352 GOLGA6L9A6NEM1 432 aa13.43□□□□□ -0.26
SEC13-211ENST00000431352 TCP11X1B4DZS4 312 aa13.43□□□□□ -0.26
SEC13-211ENST00000431352 H7C0S8 307 aa13.43□□□□□ -0.26
SEC13-211ENST00000431352 MASP2O00187 686 aa13.43□□□□□ -0.26
SEC13-211ENST00000431352 LIN7AO14910 233 aaPredicted RBP13.43□□□□□ -0.26
SEC13-211ENST00000431352 ZSCAN9O15535 394 aaPredicted RBP13.43□□□□□ -0.26
SEC13-211ENST00000431352 KRT86O43790 486 aa13.43□□□□□ -0.26
SEC13-211ENST00000431352 AP2A2O94973 939 aa13.43□□□□□ -0.26
SEC13-211ENST00000431352 FTH1P02794 183 aa13.43□□□□□ -0.26
SEC13-211ENST00000431352 HBQ1P09105 142 aa13.43□□□□□ -0.26
SEC13-211ENST00000431352 FOLR3P41439 243 aa13.43□□□□□ -0.26
SEC13-211ENST00000431352 NSG1P42857 185 aa13.43□□□□□ -0.26
SEC13-211ENST00000431352 PARP6Q2NL67 630 aa13.43□□□□□ -0.26
SEC13-211ENST00000431352 EIF2S3LQ2VIR3 472 aaKnown RBP13.43□□□□□ -0.26
SEC13-211ENST00000431352 P3H1Q32P28 736 aa13.43□□□□□ -0.26
SEC13-211ENST00000431352 ZNF385CQ66K41 422 aaPredicted RBP13.43□□□□□ -0.26
SEC13-211ENST00000431352 FAM20CQ8IXL6 584 aa13.43□□□□□ -0.26
SEC13-211ENST00000431352 STYXQ8WUJ0 223 aa13.43□□□□□ -0.26
SEC13-211ENST00000431352 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.43□□□□□ -0.26
SEC13-211ENST00000431352 TCTN2Q96GX1 697 aa13.43□□□□□ -0.26
SEC13-211ENST00000431352 OR2A14Q96R47 310 aa13.43□□□□□ -0.26
SEC13-211ENST00000431352 DPH2Q9BQC3 489 aaPredicted RBP13.43□□□□□ -0.26
SEC13-211ENST00000431352 TMEM121Q9BTD3 319 aa13.43□□□□□ -0.26
SEC13-211ENST00000431352 SLC29A3Q9BZD2 475 aa13.43□□□□□ -0.26
SEC13-211ENST00000431352 TXLNGQ9NUQ3 528 aa13.43□□□□□ -0.26
SEC13-211ENST00000431352 IFT80Q9P2H3 777 aaPredicted RBP13.43□□□□□ -0.26
SEC13-211ENST00000431352 NDOR1Q9UHB4 597 aa13.43□□□□□ -0.26
SEC13-211ENST00000431352 CDYLQ9Y232 598 aa13.43□□□□□ -0.26
SEC13-211ENST00000431352 R3HDM2Q9Y2K5 976 aaKnown RBP13.43□□□□□ -0.26
SEC13-211ENST00000431352 SHANK1Q9Y566 2161 aa13.43□□□□□ -0.26
SEC13-211ENST00000431352 PCDHGB7Q9Y5F8 929 aa13.43□□□□□ -0.26
SEC13-211ENST00000431352 A0A0J9YY10 115 aa13.42□□□□□ -0.26
SEC13-211ENST00000431352 CCDC162PA2VCL2 907 aa13.42□□□□□ -0.26
SEC13-211ENST00000431352 ISM1B1AKI9 464 aa13.42□□□□□ -0.26
SEC13-211ENST00000431352 KLF7O75840 302 aaPredicted RBP13.42□□□□□ -0.26
SEC13-211ENST00000431352 AP2A1O95782 977 aa13.42□□□□□ -0.26
SEC13-211ENST00000431352 VWA5B1Q5TIE3 1220 aa13.42□□□□□ -0.26
SEC13-211ENST00000431352 RAD9BQ6WBX8 426 aa13.42□□□□□ -0.26
SEC13-211ENST00000431352 PEX26Q7Z412 305 aa13.42□□□□□ -0.26
SEC13-211ENST00000431352 KIAA1328Q86T90 577 aa13.42□□□□□ -0.26
SEC13-211ENST00000431352 TAX1BP1Q86VP1 789 aa13.42□□□□□ -0.26
SEC13-211ENST00000431352 TMTC1Q8IUR5 882 aa13.42□□□□□ -0.26
SEC13-211ENST00000431352 TMEM151BQ8IW70 566 aa13.42□□□□□ -0.26
SEC13-211ENST00000431352 KLHDC8BQ8IXV7 354 aa13.42□□□□□ -0.26
SEC13-211ENST00000431352 LRRC57Q8N9N7 239 aa13.42□□□□□ -0.26
SEC13-211ENST00000431352 DNAAF3Q8N9W5 541 aa13.42□□□□□ -0.26
SEC13-211ENST00000431352 LMNTD1Q8N9Z9 388 aa13.42□□□□□ -0.26
SEC13-211ENST00000431352 GLIS1Q8NBF1 620 aa13.42□□□□□ -0.26
SEC13-211ENST00000431352 OR52K1Q8NGK4 314 aa13.42□□□□□ -0.26
SEC13-211ENST00000431352 PRR7Q8TB68 274 aa13.42□□□□□ -0.26
SEC13-211ENST00000431352 PNPLA2Q96AD5 504 aa13.42□□□□□ -0.26
SEC13-211ENST00000431352 C19orf60Q96EN9 201 aa13.42□□□□□ -0.26
SEC13-211ENST00000431352 C19orf43Q9BQ61 176 aa13.42□□□□□ -0.26
SEC13-211ENST00000431352 DHRS4Q9BTZ2 278 aa13.42□□□□□ -0.26
SEC13-211ENST00000431352 AMFRQ9UKV5 643 aa13.42□□□□□ -0.26
SEC13-211ENST00000431352 KLHL20Q9Y2M5 609 aa13.42□□□□□ -0.26
SEC13-211ENST00000431352 AP1M2Q9Y6Q5 423 aa13.42□□□□□ -0.26
SEC13-211ENST00000431352 TEX15Q9BXT5 2789 aa13.41□□□□□ -0.26
SEC13-211ENST00000431352 PRRC2CQ9Y520 2896 aaKnown RBP13.41□□□□□ -0.26
SEC13-211ENST00000431352 TCRBV7S2A1N4TA0A589 114 aa13.41□□□□□ -0.26
SEC13-211ENST00000431352 BHMG1C9JSJ3 638 aaPredicted RBP13.41□□□□□ -0.26
SEC13-211ENST00000431352 PEX12O00623 359 aa13.41□□□□□ -0.26
SEC13-211ENST00000431352 OR1I1O60431 355 aa13.41□□□□□ -0.26
SEC13-211ENST00000431352 ZNF189O75820 626 aaPredicted RBP13.41□□□□□ -0.26
SEC13-211ENST00000431352 FTCDO95954 541 aa13.41□□□□□ -0.26
SEC13-211ENST00000431352 GSTM1P09488 218 aa13.41□□□□□ -0.26
SEC13-211ENST00000431352 OR56A5P0C7T3 313 aa13.41□□□□□ -0.26
SEC13-211ENST00000431352 TPBGLP0DKB5 382 aa13.41□□□□□ -0.26
SEC13-211ENST00000431352 ACADLP28330 430 aa13.41□□□□□ -0.26
SEC13-211ENST00000431352 PEBP1P30086 187 aaKnown RBP13.41□□□□□ -0.26
SEC13-211ENST00000431352 FOXN2P32314 431 aa13.41□□□□□ -0.26
SEC13-211ENST00000431352 DCDP81605 110 aaKnown RBP13.41□□□□□ -0.26
SEC13-211ENST00000431352 GSTM4Q03013 218 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms