RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 ZNF460Q14592 562 aa12.07□□□□□ -0.48
USP40-205ENST00000430158 TTLL9Q3SXZ7 439 aa12.07□□□□□ -0.48
USP40-205ENST00000430158 CCDC157Q569K6 752 aa12.07□□□□□ -0.48
USP40-205ENST00000430158 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.07□□□□□ -0.48
USP40-205ENST00000430158 HES3Q5TGS1 186 aa12.07□□□□□ -0.48
USP40-205ENST00000430158 UGT3A1Q6NUS8 523 aa12.07□□□□□ -0.48
USP40-205ENST00000430158 USP53Q70EK8 1073 aa12.07□□□□□ -0.48
USP40-205ENST00000430158 B3GNT8Q7Z7M8 397 aa12.07□□□□□ -0.48
USP40-205ENST00000430158 TMPRSS12Q86WS5 348 aa12.07□□□□□ -0.48
USP40-205ENST00000430158 FBXO15Q8NCQ5 510 aaPredicted RBP12.07□□□□□ -0.48
USP40-205ENST00000430158 OR52E1Q8NGJ3 308 aa12.07□□□□□ -0.48
USP40-205ENST00000430158 WDR48Q8TAF3 677 aa12.07□□□□□ -0.48
USP40-205ENST00000430158 FLVCR1-AS1Q8TAF5 88 aa12.07□□□□□ -0.48
USP40-205ENST00000430158 DENND1AQ8TEH3 1009 aa12.07□□□□□ -0.48
USP40-205ENST00000430158 ANKRD49Q8WVL7 239 aa12.07□□□□□ -0.48
USP40-205ENST00000430158 RSC1A1Q92681 617 aa12.07□□□□□ -0.48
USP40-205ENST00000430158 ISL2Q96A47 359 aa12.07□□□□□ -0.48
USP40-205ENST00000430158 UBXN10Q96LJ8 280 aa12.07□□□□□ -0.48
USP40-205ENST00000430158 RAB33BQ9H082 229 aa12.07□□□□□ -0.48
USP40-205ENST00000430158 TRIT1Q9H3H1 467 aaKnown RBP12.07□□□□□ -0.48
USP40-205ENST00000430158 EPB41L1Q9H4G0 881 aa12.07□□□□□ -0.48
USP40-205ENST00000430158 CAB39LQ9H9S4 337 aa12.07□□□□□ -0.48
USP40-205ENST00000430158 TMEM9Q9P0T7 183 aa12.07□□□□□ -0.48
USP40-205ENST00000430158 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.07□□□□□ -0.48
USP40-205ENST00000430158 SEMA5BQ9P283 1151 aa12.07□□□□□ -0.48
USP40-205ENST00000430158 EPHA6Q9UF33 1036 aa12.07□□□□□ -0.48
USP40-205ENST00000430158 FETUBQ9UGM5 382 aa12.07□□□□□ -0.48
USP40-205ENST00000430158 TRMT6Q9UJA5 497 aaKnown RBP12.07□□□□□ -0.48
USP40-205ENST00000430158 ZNF180Q9UJW8 692 aa12.07□□□□□ -0.48
USP40-205ENST00000430158 ICKQ9UPZ9 632 aa12.07□□□□□ -0.48
USP40-205ENST00000430158 ASF1AQ9Y294 204 aa12.07□□□□□ -0.48
USP40-205ENST00000430158 KRT87PA6NCN2 255 aa12.06□□□□□ -0.48
USP40-205ENST00000430158 BTN3A3O00478 584 aa12.06□□□□□ -0.48
USP40-205ENST00000430158 UBXN7O94888 489 aa12.06□□□□□ -0.48
USP40-205ENST00000430158 CPNE6O95741 557 aa12.06□□□□□ -0.48
USP40-205ENST00000430158 C9P02748 559 aa12.06□□□□□ -0.48
USP40-205ENST00000430158 SHBGP04278 402 aa12.06□□□□□ -0.48
USP40-205ENST00000430158 PROS1P07225 676 aa12.06□□□□□ -0.48
USP40-205ENST00000430158 ADRB1P08588 477 aa12.06□□□□□ -0.48
USP40-205ENST00000430158 GMPRP36959 345 aa12.06□□□□□ -0.48
USP40-205ENST00000430158 HSD17B3P37058 310 aa12.06□□□□□ -0.48
USP40-205ENST00000430158 BDKRB1P46663 353 aa12.06□□□□□ -0.48
USP40-205ENST00000430158 CAPZBP47756 277 aa12.06□□□□□ -0.48
USP40-205ENST00000430158 PPP1CAP62136 330 aa12.06□□□□□ -0.48
USP40-205ENST00000430158 CAMK2BQ13554 666 aa12.06□□□□□ -0.48
USP40-205ENST00000430158 AMZ1Q400G9 498 aa12.06□□□□□ -0.48
USP40-205ENST00000430158 EMBQ6PCB8 327 aa12.06□□□□□ -0.48
USP40-205ENST00000430158 WDR74Q6RFH5 385 aaPredicted RBP12.06□□□□□ -0.48
USP40-205ENST00000430158 MARCH9Q86YJ5 346 aa12.06□□□□□ -0.48
USP40-205ENST00000430158 DCUN1D3Q8IWE4 304 aa12.06□□□□□ -0.48
USP40-205ENST00000430158 ADGRF3Q8IZF5 1079 aa12.06□□□□□ -0.48
USP40-205ENST00000430158 MREGQ8N565 214 aa12.06□□□□□ -0.48
USP40-205ENST00000430158 ZNF454Q8N9F8 522 aa12.06□□□□□ -0.48
USP40-205ENST00000430158 PAFAH2Q99487 392 aa12.06□□□□□ -0.48
USP40-205ENST00000430158 HGH1Q9BTY7 390 aa12.06□□□□□ -0.48
USP40-205ENST00000430158 STN1Q9H668 368 aaKnown RBP12.06□□□□□ -0.48
USP40-205ENST00000430158 RDH14Q9HBH5 336 aa12.06□□□□□ -0.48
USP40-205ENST00000430158 EURLQ9NYK6 297 aa12.06□□□□□ -0.48
USP40-205ENST00000430158 POLG2Q9UHN1 485 aa12.06□□□□□ -0.48
USP40-205ENST00000430158 ADAMTS6Q9UKP5 1117 aa12.06□□□□□ -0.48
USP40-205ENST00000430158 SLC39A10Q9ULF5 831 aa12.06□□□□□ -0.48
USP40-205ENST00000430158 MN1Q10571 1320 aaPredicted RBP12.06□□□□□ -0.48
USP40-205ENST00000430158 IGHV5-10-1A0A0J9YXX1 117 aa12.05□□□□□ -0.48
USP40-205ENST00000430158 OR5K3A6NET4 321 aa12.05□□□□□ -0.48
USP40-205ENST00000430158 MYO1CO00159 1063 aa12.05□□□□□ -0.48
USP40-205ENST00000430158 PHGDHO43175 533 aaKnown RBP12.05□□□□□ -0.48
USP40-205ENST00000430158 HYAL3O43820 417 aaPredicted RBP12.05□□□□□ -0.48
USP40-205ENST00000430158 PRICKLE3O43900 615 aaPredicted RBP12.05□□□□□ -0.48
USP40-205ENST00000430158 ALDOAP04075 364 aaKnown RBP12.05□□□□□ -0.48
USP40-205ENST00000430158 SLC35E2BP0CK96 405 aa12.05□□□□□ -0.48
USP40-205ENST00000430158 ERGP11308 486 aa12.05□□□□□ -0.48
USP40-205ENST00000430158 TYRP1P17643 537 aa12.05□□□□□ -0.48
USP40-205ENST00000430158 PKLRP30613 574 aa12.05□□□□□ -0.48
USP40-205ENST00000430158 CCKBRP32239 447 aa12.05□□□□□ -0.48
USP40-205ENST00000430158 IL2P60568 153 aa12.05□□□□□ -0.48
USP40-205ENST00000430158 DLG1Q12959 904 aa12.05□□□□□ -0.48
USP40-205ENST00000430158 BMPR2Q13873 1038 aa12.05□□□□□ -0.48
USP40-205ENST00000430158 USP10Q14694 798 aaKnown RBP12.05□□□□□ -0.48
USP40-205ENST00000430158 ISXQ2M1V0 245 aa12.05□□□□□ -0.48
USP40-205ENST00000430158 ZXDCQ2QGD7 858 aaPredicted RBP12.05□□□□□ -0.48
USP40-205ENST00000430158 TMEM71Q6P5X7 295 aa12.05□□□□□ -0.48
USP40-205ENST00000430158 RBM44Q6ZP01 1051 aaKnown RBP12.05□□□□□ -0.48
USP40-205ENST00000430158 ARHGAP22Q7Z5H3 698 aa12.05□□□□□ -0.48
USP40-205ENST00000430158 CMC1Q7Z7K0 106 aa12.05□□□□□ -0.48
USP40-205ENST00000430158 LINC01555Q8NAE3 123 aa12.05□□□□□ -0.48
USP40-205ENST00000430158 OR4E2Q8NGC2 313 aa12.05□□□□□ -0.48
USP40-205ENST00000430158 OR4D9Q8NGE8 314 aa12.05□□□□□ -0.48
USP40-205ENST00000430158 OR10G6Q8NH81 332 aa12.05□□□□□ -0.48
USP40-205ENST00000430158 CFAP61Q8NHU2 1237 aa12.05□□□□□ -0.48
USP40-205ENST00000430158 MZB1Q8WU39 189 aa12.05□□□□□ -0.48
USP40-205ENST00000430158 LCN9Q8WX39 176 aa12.05□□□□□ -0.48
USP40-205ENST00000430158 ANKRD7Q92527 254 aa12.05□□□□□ -0.48
USP40-205ENST00000430158 MRRFQ96E11 262 aaKnown RBP12.05□□□□□ -0.48
USP40-205ENST00000430158 LINGO1Q96FE5 620 aa12.05□□□□□ -0.48
USP40-205ENST00000430158 GFM1Q96RP9 751 aaKnown RBP12.05□□□□□ -0.48
USP40-205ENST00000430158 DPYSL5Q9BPU6 564 aa12.05□□□□□ -0.48
USP40-205ENST00000430158 SLC12A9Q9BXP2 914 aa12.05□□□□□ -0.48
USP40-205ENST00000430158 ABCG4Q9H172 646 aa12.05□□□□□ -0.48
USP40-205ENST00000430158 SEMA6CQ9H3T2 930 aa12.05□□□□□ -0.48
USP40-205ENST00000430158 XKR8Q9H6D3 395 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms