RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 ZDHHC1Q8WTX9 485 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 PATE1Q8WXA2 126 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 SREK1Q8WXA9 508 aaKnown RBP7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 DLG3Q92796 817 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 ATOH8Q96SQ7 321 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 INSM2Q96T92 566 aaPredicted RBP7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 SLC12A9Q9BXP2 914 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 STN1Q9H668 368 aaKnown RBP7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 MVB12BQ9H7P6 319 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 WASH6PQ9NQA3 447 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 WWOXQ9NZC7 414 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 SCHIP1Q9P0W5 487 aaPredicted RBP7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 PCOLCE2Q9UKZ9 415 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 PLAGL1Q9UM63 463 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 PDE10AQ9Y233 779 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 CSNK1G3Q9Y6M4 447 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 ZNF318Q5VUA4 2279 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 LNP1A1A4G5 178 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 WDR91A4D1P6 747 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 OR5K4A6NMS3 321 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 A8MT66 165 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 GFYI3L273 518 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 MYO1CO00159 1063 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 KDM1AO60341 852 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 TPBGLP0DKB5 382 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 CHN1P15882 459 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 KCNA4P22459 653 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 ATP5F1P24539 256 aaPredicted RBP7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 NDUFS1P28331 727 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 RPIAP49247 311 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 PPM1FP49593 454 aaPredicted RBP7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 SLC18A1P54219 525 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 MAZP56270 477 aaKnown RBP7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 AP1S2P56377 157 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 SPEM2Q0P670 501 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 BNIP3Q12983 259 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 TSTA3Q13630 321 aaPredicted RBP7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 PCLAFQ15004 111 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 TGFBIQ15582 683 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 PFKFB4Q16877 469 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 INAVAQ3KP66 663 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 CCSMST1Q4G0I0 132 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 PLA2G2CQ5R387 149 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 IYDQ6PHW0 289 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 RAB44Q7Z6P3 723 aaPredicted RBP7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 SLC9B2Q86UD5 537 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 C10orf107Q8IVU9 208 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 SFTPA2Q8IWL1 248 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 NAGSQ8N159 534 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 SLC25A45Q8N413 288 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 RAB42Q8N4Z0 105 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 ARL10Q8N8L6 244 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 SAP25Q8TEE9 199 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 ATL1Q8WXF7 558 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 RAD51AP1Q96B01 352 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 CCDC126Q96EE4 140 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 PKP4Q99569 1192 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 MECRQ9BV79 373 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 EDEM2Q9BV94 578 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 KCNH6Q9H252 994 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 ABCF3Q9NUQ8 709 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 POT1Q9NUX5 634 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 INTS9Q9NV88 658 aaKnown RBP7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 NLGN3Q9NZ94 848 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 NCKIPSDQ9NZQ3 722 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 ZNF624Q9P2J8 865 aaPredicted RBP7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 COPG2Q9UBF2 871 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 CPNE7Q9UBL6 633 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 POLG2Q9UHN1 485 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 TMCO1Q9UM00 188 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 COLEC10Q9Y6Z7 277 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 GPR179Q6PRD1 2367 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 USP34Q70CQ2 3546 aa7.7□□□□□ -1.18
HMGA1P4-201ENST00000428643 CACNA1HO95180 2353 aa7.69□□□□□ -1.18
HMGA1P4-201ENST00000428643 ABCA7Q8IZY2 2146 aa7.69□□□□□ -1.18
HMGA1P4-201ENST00000428643 SPAG17Q6Q759 2223 aa7.69□□□□□ -1.18
HMGA1P4-201ENST00000428643 PRAMEF33A0A0G2JMD5 474 aa7.69□□□□□ -1.18
HMGA1P4-201ENST00000428643 G3V2L1 256 aa7.69□□□□□ -1.18
HMGA1P4-201ENST00000428643 POLR3GO15318 223 aaPredicted RBP7.69□□□□□ -1.18
HMGA1P4-201ENST00000428643 DLX3O60479 287 aa7.69□□□□□ -1.18
HMGA1P4-201ENST00000428643 SLC16A8O95907 504 aa7.69□□□□□ -1.18
HMGA1P4-201ENST00000428643 ANXA5P08758 320 aa7.69□□□□□ -1.18
HMGA1P4-201ENST00000428643 ZNF806P0C7X5 589 aa7.69□□□□□ -1.18
HMGA1P4-201ENST00000428643 ALDH3A1P30838 453 aa7.69□□□□□ -1.18
HMGA1P4-201ENST00000428643 SHMT2P34897 504 aa7.69□□□□□ -1.18
HMGA1P4-201ENST00000428643 SLC19A1P41440 591 aa7.69□□□□□ -1.18
HMGA1P4-201ENST00000428643 ETV4P43268 484 aa7.69□□□□□ -1.18
HMGA1P4-201ENST00000428643 KCNC1P48547 511 aa7.69□□□□□ -1.18
HMGA1P4-201ENST00000428643 ALDH18A1P54886 795 aaKnown RBP7.69□□□□□ -1.18
HMGA1P4-201ENST00000428643 WDR4P57081 412 aaKnown RBP7.69□□□□□ -1.18
HMGA1P4-201ENST00000428643 UBE2IP63279 158 aaKnown RBP7.69□□□□□ -1.18
HMGA1P4-201ENST00000428643 CDKL1Q00532 357 aa7.69□□□□□ -1.18
HMGA1P4-201ENST00000428643 NFKB2Q00653 900 aa7.69□□□□□ -1.18
HMGA1P4-201ENST00000428643 HHEXQ03014 270 aa7.69□□□□□ -1.18
HMGA1P4-201ENST00000428643 ASPHQ12797 758 aa7.69□□□□□ -1.18
HMGA1P4-201ENST00000428643 GPR18Q14330 331 aa7.69□□□□□ -1.18
HMGA1P4-201ENST00000428643 SETDB1Q15047 1291 aa7.69□□□□□ -1.18
HMGA1P4-201ENST00000428643 C18orf21Q32NC0 220 aaPredicted RBP7.69□□□□□ -1.18
HMGA1P4-201ENST00000428643 AASDHQ4L235 1098 aaPredicted RBP7.69□□□□□ -1.18
HMGA1P4-201ENST00000428643 C14orf28Q4W4Y0 310 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms