RNA–Protein interactions for RNA: ENST00000428450.5

DDX39B-209, Transcript of DExD-box helicase 39B, humanhuman

TSL 4

Gene DDX39B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-209ENST00000428450 ATRQ13535 2644 aa11.04□□□□□ -0.64
DDX39B-209ENST00000428450 GTF3C1Q12789 2109 aa11.03□□□□□ -0.64
DDX39B-209ENST00000428450 TMCO5BA8MYB1 307 aa11.03□□□□□ -0.64
DDX39B-209ENST00000428450 GAPDHSO14556 408 aaPredicted RBP11.03□□□□□ -0.64
DDX39B-209ENST00000428450 ADAM10O14672 748 aa11.03□□□□□ -0.64
DDX39B-209ENST00000428450 USP1O94782 785 aa11.03□□□□□ -0.64
DDX39B-209ENST00000428450 WDPCPO95876 746 aa11.03□□□□□ -0.64
DDX39B-209ENST00000428450 POLBP06746 335 aa11.03□□□□□ -0.64
DDX39B-209ENST00000428450 CD48P09326 243 aa11.03□□□□□ -0.64
DDX39B-209ENST00000428450 PRR35P0CG20 571 aa11.03□□□□□ -0.64
DDX39B-209ENST00000428450 ALAS2P22557 587 aa11.03□□□□□ -0.64
DDX39B-209ENST00000428450 PMP22Q01453 160 aa11.03□□□□□ -0.64
DDX39B-209ENST00000428450 CACNG1Q06432 222 aa11.03□□□□□ -0.64
DDX39B-209ENST00000428450 ZBTB17Q13105 803 aa11.03□□□□□ -0.64
DDX39B-209ENST00000428450 TCP11X2Q5H9J9 407 aa11.03□□□□□ -0.64
DDX39B-209ENST00000428450 CCDC122Q5T0U0 273 aa11.03□□□□□ -0.64
DDX39B-209ENST00000428450 Q71RC1 249 aaPredicted RBP11.03□□□□□ -0.64
DDX39B-209ENST00000428450 TAOK1Q7L7X3 1001 aa11.03□□□□□ -0.64
DDX39B-209ENST00000428450 TMEM200AQ86VY9 491 aa11.03□□□□□ -0.64
DDX39B-209ENST00000428450 AMIGO1Q86WK6 493 aa11.03□□□□□ -0.64
DDX39B-209ENST00000428450 KBTBD2Q8IY47 623 aa11.03□□□□□ -0.64
DDX39B-209ENST00000428450 OR52E1Q8NGJ3 308 aa11.03□□□□□ -0.64
DDX39B-209ENST00000428450 FLVCR1-AS1Q8TAF5 88 aa11.03□□□□□ -0.64
DDX39B-209ENST00000428450 FAM71BQ8TC56 605 aa11.03□□□□□ -0.64
DDX39B-209ENST00000428450 THAP3Q8WTV1 239 aaPredicted RBP11.03□□□□□ -0.64
DDX39B-209ENST00000428450 CA5BP1Q8WTZ4 195 aa11.03□□□□□ -0.64
DDX39B-209ENST00000428450 PHF10Q8WUB8 498 aaKnown RBP11.03□□□□□ -0.64
DDX39B-209ENST00000428450 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.03□□□□□ -0.64
DDX39B-209ENST00000428450 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.03□□□□□ -0.646e-6■□□□□ 9.8
DDX39B-209ENST00000428450 TADA1Q96BN2 335 aa11.03□□□□□ -0.64
DDX39B-209ENST00000428450 LINC00615Q96LM1 132 aaPredicted RBP11.03□□□□□ -0.64
DDX39B-209ENST00000428450 OR2A14Q96R47 310 aa11.03□□□□□ -0.64
DDX39B-209ENST00000428450 DMRTA2Q96SC8 542 aa11.03□□□□□ -0.64
DDX39B-209ENST00000428450 SMR3AQ99954 134 aa11.03□□□□□ -0.64
DDX39B-209ENST00000428450 XKR8Q9H6D3 395 aa11.03□□□□□ -0.64
DDX39B-209ENST00000428450 NPDC1Q9NQX5 325 aaPredicted RBP11.03□□□□□ -0.64
DDX39B-209ENST00000428450 TAB2Q9NYJ8 693 aa11.03□□□□□ -0.64
DDX39B-209ENST00000428450 FAM8A1Q9UBU6 413 aa11.03□□□□□ -0.64
DDX39B-209ENST00000428450 CTSFQ9UBX1 484 aa11.03□□□□□ -0.64
DDX39B-209ENST00000428450 MRPS2Q9Y399 296 aaKnown RBP11.03□□□□□ -0.64
DDX39B-209ENST00000428450 HEBP2Q9Y5Z4 205 aa11.03□□□□□ -0.64
DDX39B-209ENST00000428450 A0A1B0GX78 115 aa11.02□□□□□ -0.65
DDX39B-209ENST00000428450 KLHL33A6NCF5 533 aa11.02□□□□□ -0.65
DDX39B-209ENST00000428450 VSTM2BA6NLU5 285 aa11.02□□□□□ -0.65
DDX39B-209ENST00000428450 KCNK1O00180 336 aa11.02□□□□□ -0.65
DDX39B-209ENST00000428450 SGTAO43765 313 aa11.02□□□□□ -0.65
DDX39B-209ENST00000428450 ZRANB2O95218 330 aaKnown RBP eCLIP11.02□□□□□ -0.656e-7■■■■■ 28.2
DDX39B-209ENST00000428450 UGT2B7P16662 529 aa11.02□□□□□ -0.65
DDX39B-209ENST00000428450 SLC10A2Q12908 348 aaPredicted RBP11.02□□□□□ -0.65
DDX39B-209ENST00000428450 LONRF2Q1L5Z9 754 aa11.02□□□□□ -0.65
DDX39B-209ENST00000428450 CCDC183Q5T5S1 534 aa11.02□□□□□ -0.65
DDX39B-209ENST00000428450 ATG9BQ674R7 924 aa11.02□□□□□ -0.65
DDX39B-209ENST00000428450 FAM151BQ6UXP7 276 aa11.02□□□□□ -0.65
DDX39B-209ENST00000428450 TTLL10Q6ZVT0 673 aa11.02□□□□□ -0.65
DDX39B-209ENST00000428450 DET1Q7L5Y6 550 aa11.02□□□□□ -0.65
DDX39B-209ENST00000428450 DAAM2Q86T65 1068 aa11.02□□□□□ -0.65
DDX39B-209ENST00000428450 CFAP206Q8IYR0 622 aa11.02□□□□□ -0.65
DDX39B-209ENST00000428450 SIRT6Q8N6T7 355 aa11.02□□□□□ -0.65
DDX39B-209ENST00000428450 DNAAF3Q8N9W5 541 aa11.02□□□□□ -0.65
DDX39B-209ENST00000428450 PHC3Q8NDX5 983 aa11.02□□□□□ -0.65
DDX39B-209ENST00000428450 CCDC110Q8TBZ0 833 aa11.02□□□□□ -0.65
DDX39B-209ENST00000428450 SDCCAG3Q96C92 435 aa11.02□□□□□ -0.65
DDX39B-209ENST00000428450 IMP4Q96G21 291 aaKnown RBP11.02□□□□□ -0.65
DDX39B-209ENST00000428450 VPS50Q96JG6 964 aa11.02□□□□□ -0.65
DDX39B-209ENST00000428450 MAGED4Q96JG8 741 aa11.02□□□□□ -0.65
DDX39B-209ENST00000428450 GPR137Q96N19 417 aa11.02□□□□□ -0.65
DDX39B-209ENST00000428450 FERD3LQ96RJ6 166 aa11.02□□□□□ -0.65
DDX39B-209ENST00000428450 CCM2Q9BSQ5 444 aa11.02□□□□□ -0.65
DDX39B-209ENST00000428450 HCFC1P51610 2035 aa11.01□□□□□ -0.65
DDX39B-209ENST00000428450 E9PLN8 166 aa11.01□□□□□ -0.65
DDX39B-209ENST00000428450 GADD45BO75293 160 aaPredicted RBP11.01□□□□□ -0.65
DDX39B-209ENST00000428450 PMPCBO75439 489 aa11.01□□□□□ -0.65
DDX39B-209ENST00000428450 SLCO2B1O94956 709 aa11.01□□□□□ -0.65
DDX39B-209ENST00000428450 PRAMEF1O95521 474 aa11.01□□□□□ -0.65
DDX39B-209ENST00000428450 PIM1P11309 404 aaPredicted RBP11.01□□□□□ -0.65
DDX39B-209ENST00000428450 EEF1GP26641 437 aaKnown RBP11.01□□□□□ -0.65
DDX39B-209ENST00000428450 SPAM1P38567 509 aa11.01□□□□□ -0.65
DDX39B-209ENST00000428450 ARSEP51690 589 aa11.01□□□□□ -0.65
DDX39B-209ENST00000428450 ADAM8P78325 824 aa11.01□□□□□ -0.65
DDX39B-209ENST00000428450 SLC25A11Q02978 314 aaKnown RBP11.01□□□□□ -0.65
DDX39B-209ENST00000428450 FOLH1Q04609 750 aa11.01□□□□□ -0.65
DDX39B-209ENST00000428450 TFF3Q07654 80 aa11.01□□□□□ -0.65
DDX39B-209ENST00000428450 CEBPEQ15744 281 aa11.01□□□□□ -0.65
DDX39B-209ENST00000428450 PCSK7Q16549 785 aa11.01□□□□□ -0.65
DDX39B-209ENST00000428450 BCL7AQ4VC05 210 aa11.01□□□□□ -0.65
DDX39B-209ENST00000428450 KRTCAP3Q53RY4 240 aa11.01□□□□□ -0.65
DDX39B-209ENST00000428450 BIVMQ86UB2 503 aa11.01□□□□□ -0.65
DDX39B-209ENST00000428450 DOLPP1Q86YN1 238 aa11.01□□□□□ -0.65
DDX39B-209ENST00000428450 CHERPQ8IWX8 916 aaKnown RBP11.01□□□□□ -0.65
DDX39B-209ENST00000428450 DMRTC2Q8IXT2 367 aaPredicted RBP11.01□□□□□ -0.65
DDX39B-209ENST00000428450 AGAP11Q8TF27 550 aa11.01□□□□□ -0.65
DDX39B-209ENST00000428450 C8orf44Q96CB5 159 aa11.01□□□□□ -0.65
DDX39B-209ENST00000428450 ARSGQ96EG1 525 aa11.01□□□□□ -0.65
DDX39B-209ENST00000428450 RBM41Q96IZ5 413 aaKnown RBP11.01□□□□□ -0.65
DDX39B-209ENST00000428450 VKORC1Q9BQB6 163 aa11.01□□□□□ -0.65
DDX39B-209ENST00000428450 RNF32Q9H0A6 362 aa11.01□□□□□ -0.65
DDX39B-209ENST00000428450 LIME1Q9H400 295 aa11.01□□□□□ -0.65
DDX39B-209ENST00000428450 FANCLQ9NW38 375 aa11.01□□□□□ -0.65
DDX39B-209ENST00000428450 SMOXQ9NWM0 555 aa11.01□□□□□ -0.65
DDX39B-209ENST00000428450 SPHK1Q9NYA1 384 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms