RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 RAB42Q8N4Z0 105 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 ZSCAN1Q8NBB4 408 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 OR52E1Q8NGJ3 308 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 ANKRD7Q92527 254 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 ART4Q93070 314 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 NKD1Q969G9 470 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 NACC2Q96BF6 587 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 STAMBPL1Q96FJ0 436 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 SLC45A3Q96JT2 553 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 FOPNLQ96NB1 174 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 EBNA1BP2Q99848 306 aaKnown RBP8.87□□□□□ -0.99
SMC1A-203ENST00000428014 MENTQ9BUN1 341 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 NSMCE4AQ9NXX6 385 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 TMEM9Q9P0T7 183 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 SPATA7Q9P0W8 599 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 WHRNQ9P202 907 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 TUBD1Q9UJT1 453 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 ASF1AQ9Y294 204 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 B3GALT1Q9Y5Z6 326 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 PRSS21Q9Y6M0 314 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 RPS6KL1Q9Y6S9 549 aa8.87□□□□□ -0.99
SMC1A-203ENST00000428014 TRBV23OR9-2A0A075B6M9 112 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 CCDC78A2IDD5 438 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 OR51F1A6NGY5 319 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 USP27XA6NNY8 438 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 ZNF839A8K0R7 811 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 TARM1B6A8C7 271 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 CCL22O00626 93 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 ZNF185O15231 689 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 ATXN7O15265 892 aaPredicted RBP8.86□□□□□ -0.99
SMC1A-203ENST00000428014 OR1I1O60431 355 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 GSTA2P09210 222 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 PKMP14618 531 aaKnown RBP8.86□□□□□ -0.99
SMC1A-203ENST00000428014 PDHA2P29803 388 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 PRDX3P30048 256 aaKnown RBP8.86□□□□□ -0.99
SMC1A-203ENST00000428014 GFERP55789 205 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 SEMA3AQ14563 771 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 COL28A1Q2UY09 1125 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 ANKRD22Q5VYY1 191 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 PTRHD1Q6GMV3 140 aaKnown RBP8.86□□□□□ -0.99
SMC1A-203ENST00000428014 UGT3A1Q6NUS8 523 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 SPESP1Q6UW49 350 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 CCDC81Q6ZN84 652 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 CENPUQ71F23 418 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 PRUNE1Q86TP1 453 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 JAMLQ86YT9 394 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 ADGRF3Q8IZF5 1079 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 SIDT2Q8NBJ9 832 aaKnown RBP8.86□□□□□ -0.99
SMC1A-203ENST00000428014 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.86□□□□□ -0.99
SMC1A-203ENST00000428014 C2CD4AQ8NCU7 369 aaPredicted RBP8.86□□□□□ -0.99
SMC1A-203ENST00000428014 RCBTB1Q8NDN9 531 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 GSDMBQ8TAX9 411 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 ZUFSPQ96AP4 578 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 KIAA1143Q96AT1 154 aaPredicted RBP8.86□□□□□ -0.99
SMC1A-203ENST00000428014 TCTN2Q96GX1 697 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 SNF8Q96H20 258 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 FCRL3Q96P31 734 aaPredicted RBP8.86□□□□□ -0.99
SMC1A-203ENST00000428014 TGM7Q96PF1 710 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 FERD3LQ96RJ6 166 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 C17orf62Q9BQA9 187 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 GPR87Q9BY21 358 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 DDX47Q9H0S4 455 aaKnown RBP8.86□□□□□ -0.99
SMC1A-203ENST00000428014 FAM96AQ9H5X1 160 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 FANCEQ9HB96 536 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 FAM114A2Q9NRY5 505 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 INTS7Q9NVH2 962 aaKnown RBP8.86□□□□□ -0.99
SMC1A-203ENST00000428014 PIH1D1Q9NWS0 290 aaKnown RBP8.86□□□□□ -0.99
SMC1A-203ENST00000428014 OCIAD1Q9NX40 245 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 FOXJ2Q9P0K8 574 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 MARCH4Q9P2E8 410 aaPredicted RBP8.86□□□□□ -0.99
SMC1A-203ENST00000428014 ANKMY1Q9P2S6 941 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 ASIC3Q9UHC3 531 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 KCND3Q9UK17 655 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 RARRES3Q9UL19 164 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 PYCARDQ9ULZ3 195 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 PSMD13Q9UNM6 376 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 TEX264Q9Y6I9 313 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 AP1M2Q9Y6Q5 423 aa8.86□□□□□ -0.99
SMC1A-203ENST00000428014 TLN1Q9Y490 2541 aaKnown RBP8.85□□□□□ -0.99
SMC1A-203ENST00000428014 MGAQ8IWI9 3026 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 IGHV5-51A0A0C4DH38 117 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 PIPSLA2A3N6 862 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 OR6C74A6NCV1 312 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 TERTO14746 1132 aaKnown RBP8.85□□□□□ -0.99
SMC1A-203ENST00000428014 RASGRF2O14827 1237 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 CASC3O15234 703 aaKnown RBP8.85□□□□□ -0.99
SMC1A-203ENST00000428014 TP73O15350 636 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 RAD1O60671 282 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 PSIP1O75475 530 aaKnown RBP8.85□□□□□ -0.99
SMC1A-203ENST00000428014 RASSF9O75901 435 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 STK17BO94768 372 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 ONECUT2O95948 504 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 MPC1LP0DKB6 136 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 HGFP14210 728 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 TYRP1P17643 537 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 PBLDP30039 288 aaPredicted RBP8.85□□□□□ -0.99
SMC1A-203ENST00000428014 PKLRP30613 574 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 STAT5AP42229 794 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 KPNA2P52292 529 aaKnown RBP8.85□□□□□ -0.99
SMC1A-203ENST00000428014 MAPK10P53779 464 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms