RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 OR6N1Q8NGY5 312 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 RDH11Q8TC12 318 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 ACTL9Q8TC94 416 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 APOPT1Q96IL0 206 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 SEC61A2Q9H9S3 476 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 NGBQ9NPG2 151 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 NAALADL1Q9UQQ1 740 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 RPH3AQ9Y2J0 694 aaPredicted RBP5.64□□□□□ -1.51
HERC4-206ENST00000427635 SERTM1A2A2V5 107 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 KHNYNO15037 678 aaKnown RBP5.64□□□□□ -1.51
HERC4-206ENST00000427635 IRAK2O43187 625 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 USP2O75604 605 aaPredicted RBP5.64□□□□□ -1.51
HERC4-206ENST00000427635 KAT7O95251 611 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 ZNF35P13682 527 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 ERCC2P18074 760 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 RBL1P28749 1068 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 USP46P62068 366 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 CD83Q01151 205 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 CYP4F3Q08477 520 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 FAM189A2Q15884 450 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 ZNF311Q5JNZ3 666 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 PLEKHA7Q6IQ23 1121 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 SPATA19Q7Z5L4 167 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 LRRTM4Q86VH4 590 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 TMEM17Q86X19 198 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 APLFQ8IW19 511 aaPredicted RBP5.64□□□□□ -1.51
HERC4-206ENST00000427635 LINC00469Q8N7U9 141 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 BOLLQ8N9W6 283 aaKnown RBP5.64□□□□□ -1.51
HERC4-206ENST00000427635 C3orf58Q8NDZ4 430 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 LRRC20Q8TCA0 184 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 DNAJA4Q8WW22 397 aaPredicted RBP5.64□□□□□ -1.51
HERC4-206ENST00000427635 BAP1Q92560 729 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 KLRG1Q96E93 195 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 CASD1Q96PB1 797 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 NPLQ9BXD5 320 aaPredicted RBP5.64□□□□□ -1.51
HERC4-206ENST00000427635 PAIP1Q9H074 479 aaKnown RBP5.64□□□□□ -1.51
HERC4-206ENST00000427635 ATG10Q9H0Y0 220 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 FN3KQ9H479 309 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 NXF3Q9H4D5 531 aaKnown RBP5.64□□□□□ -1.51
HERC4-206ENST00000427635 NOL6Q9H6R4 1146 aaKnown RBP5.64□□□□□ -1.51
HERC4-206ENST00000427635 RAB9BQ9NP90 201 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 PEX11AO75192 247 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 FKBP6O75344 327 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 SLITRK3O94933 977 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 P04436 131 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 CD2P06729 351 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 FHP07954 510 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 PRKAR1AP10644 381 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 ACP5P13686 325 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 ACADSP16219 412 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 RHOQP17081 205 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 TFEBP19484 476 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 KDELR1P24390 212 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 DNAJB1P25685 340 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 ADH7P40394 386 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 IST1P53990 364 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 ZFP1Q6P2D0 407 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 BORAQ6PGQ7 559 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 CERS6Q6ZMG9 384 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 BEND4Q6ZU67 534 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 DEFB107AQ8IZN7 70 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 LRRN4Q8WUT4 740 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 ERGIC2Q96RQ1 377 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 MRPL45Q9BRJ2 306 aaKnown RBP5.64□□□□□ -1.51
HERC4-206ENST00000427635 SARGQ9BW04 601 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 UNC93B1Q9H1C4 597 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 MAGEH1Q9H213 219 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 KCNH6Q9H252 994 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 NMUR1Q9HB89 426 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 NOD2Q9HC29 1040 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 SLAMF7Q9NQ25 335 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 KLC4Q9NSK0 619 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 GGA2Q9UJY4 613 aa5.64□□□□□ -1.51
HERC4-206ENST00000427635 FCF1Q9Y324 198 aaKnown RBP5.64□□□□□ -1.51
HERC4-206ENST00000427635 A0A075B6Q4 140 aa5.63□□□□□ -1.51
HERC4-206ENST00000427635 MAGEA13PA6NCF6 341 aa5.63□□□□□ -1.51
HERC4-206ENST00000427635 APOC4-APOC2K7ER74 178 aa5.63□□□□□ -1.51
HERC4-206ENST00000427635 PI15O43692 258 aa5.63□□□□□ -1.51
HERC4-206ENST00000427635 FOXD2O60548 495 aaPredicted RBP5.63□□□□□ -1.51
HERC4-206ENST00000427635 CLDN9O95484 217 aa5.63□□□□□ -1.51
HERC4-206ENST00000427635 IGHEP01854 428 aa5.63□□□□□ -1.51
HERC4-206ENST00000427635 APOC2P02655 101 aa5.63□□□□□ -1.51
HERC4-206ENST00000427635 CYP3A4P08684 503 aa5.63□□□□□ -1.51
HERC4-206ENST00000427635 PIRTP0C851 137 aa5.63□□□□□ -1.51
HERC4-206ENST00000427635 HSD3B1P14060 373 aa5.63□□□□□ -1.51
HERC4-206ENST00000427635 MATKP42679 507 aa5.63□□□□□ -1.51
HERC4-206ENST00000427635 CEBPGP53567 150 aa5.63□□□□□ -1.51
HERC4-206ENST00000427635 HSPB3Q12988 150 aa5.63□□□□□ -1.51
HERC4-206ENST00000427635 MALLQ13021 153 aa5.63□□□□□ -1.51
HERC4-206ENST00000427635 TUBB3Q13509 450 aa5.63□□□□□ -1.51
HERC4-206ENST00000427635 KPNB1Q14974 876 aaKnown RBP5.63□□□□□ -1.51
HERC4-206ENST00000427635 ZNF433Q8N7K0 673 aaPredicted RBP5.63□□□□□ -1.51
HERC4-206ENST00000427635 ZNF540Q8NDQ6 660 aa5.63□□□□□ -1.51
HERC4-206ENST00000427635 ECHDC3Q96DC8 303 aa5.63□□□□□ -1.51
HERC4-206ENST00000427635 CCDC28BQ9BUN5 200 aa5.63□□□□□ -1.51
HERC4-206ENST00000427635 UCK2Q9BZX2 261 aa5.63□□□□□ -1.51
HERC4-206ENST00000427635 OR2AG1Q9H205 316 aa5.63□□□□□ -1.51
HERC4-206ENST00000427635 NSUN3Q9H649 340 aaKnown RBP5.63□□□□□ -1.51
HERC4-206ENST00000427635 XKR8Q9H6D3 395 aa5.63□□□□□ -1.51
HERC4-206ENST00000427635 AGO3Q9H9G7 860 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms