RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 PHKG1Q16816 387 aa10.46□□□□□ -0.74
CUX1-205ENST00000425244 PYCR3Q53H96 274 aa10.46□□□□□ -0.74
CUX1-205ENST00000425244 PRSS36Q5K4E3 855 aa10.46□□□□□ -0.74
CUX1-205ENST00000425244 TMEM214Q6NUQ4 689 aaKnown RBP10.46□□□□□ -0.74
CUX1-205ENST00000425244 ELMSAN1Q6PJG2 1045 aa10.46□□□□□ -0.74
CUX1-205ENST00000425244 APCDD1Q8J025 514 aa10.46□□□□□ -0.74
CUX1-205ENST00000425244 SLC35B4Q969S0 331 aa10.46□□□□□ -0.74
CUX1-205ENST00000425244 BBS2Q9BXC9 721 aa10.46□□□□□ -0.74
CUX1-205ENST00000425244 RETREG1Q9H6L5 497 aa10.46□□□□□ -0.74
CUX1-205ENST00000425244 ZFYVE1Q9HBF4 777 aa10.46□□□□□ -0.74
CUX1-205ENST00000425244 FARSBQ9NSD9 589 aaKnown RBP10.46□□□□□ -0.74
CUX1-205ENST00000425244 GALNT8Q9NY28 637 aa10.46□□□□□ -0.74
CUX1-205ENST00000425244 CRLS1Q9UJA2 301 aa10.46□□□□□ -0.74
CUX1-205ENST00000425244 TMCO1Q9UM00 188 aa10.46□□□□□ -0.74
CUX1-205ENST00000425244 TMEM98Q9Y2Y6 226 aa10.46□□□□□ -0.74
CUX1-205ENST00000425244 HEMK1Q9Y5R4 338 aaPredicted RBP10.46□□□□□ -0.74
CUX1-205ENST00000425244 H7C0S8 307 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 LSM1O15116 133 aaKnown RBP10.45□□□□□ -0.74
CUX1-205ENST00000425244 SNAP29O95721 258 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 ENO2P09104 434 aaPredicted RBP10.45□□□□□ -0.74
CUX1-205ENST00000425244 ITGALP20701 1170 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 RPS9P46781 194 aaKnown RBP10.45□□□□□ -0.74
CUX1-205ENST00000425244 EPHA5P54756 1037 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 EMX2Q04743 252 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 ZIK1Q3SY52 487 aaPredicted RBP10.45□□□□□ -0.74
CUX1-205ENST00000425244 MBOAT1Q6ZNC8 495 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 PTRH1Q86Y79 214 aaKnown RBP10.45□□□□□ -0.74
CUX1-205ENST00000425244 TBC1D21Q8IYX1 336 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 DTWD1Q8N5C7 304 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 DHRSXQ8N5I4 330 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 HM13Q8TCT9 377 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 FIG4Q92562 907 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 MUC13Q9H3R2 512 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 ACTL8Q9H568 366 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 SMPD3Q9NY59 655 aaPredicted RBP10.45□□□□□ -0.74
CUX1-205ENST00000425244 KLQ9UEF7 1012 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 GNPTGQ9UJJ9 305 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 PCDHB1Q9Y5F3 818 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 A0A087WXM4 84 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 ZNF197O14709 1029 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 DFNA5O60443 496 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 MYF6P23409 242 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 CD70P32970 193 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 YAP1P46937 504 aaKnown RBP10.45□□□□□ -0.74
CUX1-205ENST00000425244 ALDH3B2P48448 385 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 ADARP55265 1226 aaKnown RBP10.45□□□□□ -0.74
CUX1-205ENST00000425244 ESRRGP62508 458 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 BCL2L1Q07817 233 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 TRAF3Q13114 568 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 NFATC2Q13469 925 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 PCBP2Q15366 365 aaKnown RBP eCLIP10.45□□□□□ -0.741e-6■■■■■ 33.2
CUX1-205ENST00000425244 SLC36A3Q495N2 470 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 TMEM259Q4ZIN3 620 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 INO80DQ53TQ3 878 aaPredicted RBP10.45□□□□□ -0.74
CUX1-205ENST00000425244 BORAQ6PGQ7 559 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 DLEU7Q6UYE1 221 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 CERS6Q6ZMG9 384 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 GPR141Q7Z602 305 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 SPRED1Q7Z699 444 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 CLVS1Q8IUQ0 354 aaPredicted RBP10.45□□□□□ -0.74
CUX1-205ENST00000425244 RBFAQ8N0V3 343 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 GOLM1Q8NBJ4 401 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 TNIP2Q8NFZ5 429 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 CLHC1Q8NHS4 586 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 OSCP1Q8WVF1 389 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 PIH1D2Q8WWB5 315 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 MTFMTQ96DP5 389 aaKnown RBP10.45□□□□□ -0.74
CUX1-205ENST00000425244 MRPL38Q96DV4 380 aaKnown RBP10.45□□□□□ -0.74
CUX1-205ENST00000425244 LRRC3BQ96PB8 259 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 CGREF1Q99674 301 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 THUMPD3Q9BV44 507 aaKnown RBP10.45□□□□□ -0.74
CUX1-205ENST00000425244 FAM126AQ9BYI3 521 aaPredicted RBP10.45□□□□□ -0.74
CUX1-205ENST00000425244 ZNF576Q9H609 170 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 MAGEE1Q9HCI5 957 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 PREBQ9HCU5 417 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 IL26Q9NPH9 171 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 HEBP1Q9NRV9 189 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 ABCB8Q9NUT2 735 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.45□□□□□ -0.74
CUX1-205ENST00000425244 C2orf16Q68DN1 1984 aa10.45□□□□□ -0.74
CUX1-205ENST00000425244 KANSL1LA0AUZ9 987 aa10.44□□□□□ -0.74
CUX1-205ENST00000425244 GSTA4O15217 222 aa10.44□□□□□ -0.74
CUX1-205ENST00000425244 TAPBPO15533 448 aa10.44□□□□□ -0.74
CUX1-205ENST00000425244 FZD6O60353 706 aa10.44□□□□□ -0.74
CUX1-205ENST00000425244 GMNNO75496 209 aa10.44□□□□□ -0.74
CUX1-205ENST00000425244 FGF19O95750 216 aa10.44□□□□□ -0.74
CUX1-205ENST00000425244 CD9P21926 228 aa10.44□□□□□ -0.74
CUX1-205ENST00000425244 HYAL1Q12794 435 aa10.44□□□□□ -0.74
CUX1-205ENST00000425244 CHRNA6Q15825 494 aa10.44□□□□□ -0.74
CUX1-205ENST00000425244 IMPG1Q17R60 797 aa10.44□□□□□ -0.74
CUX1-205ENST00000425244 SPATS1Q496A3 300 aa10.44□□□□□ -0.74
CUX1-205ENST00000425244 LY6G5CQ5SRR4 150 aa10.44□□□□□ -0.74
CUX1-205ENST00000425244 TBPL2Q6SJ96 375 aa10.44□□□□□ -0.74
CUX1-205ENST00000425244 SKA2Q8WVK7 121 aaPredicted RBP10.44□□□□□ -0.74
CUX1-205ENST00000425244 FGF13Q92913 245 aa10.44□□□□□ -0.74
CUX1-205ENST00000425244 ULK4Q96C45 1275 aa10.44□□□□□ -0.74
CUX1-205ENST00000425244 ZBTB18Q99592 522 aa10.44□□□□□ -0.74
CUX1-205ENST00000425244 TBCDQ9BTW9 1192 aa10.44□□□□□ -0.74
CUX1-205ENST00000425244 SFXN1Q9H9B4 322 aa10.44□□□□□ -0.74
CUX1-205ENST00000425244 OPTCQ9UBM4 332 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms