RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 MSANTD2Q6P1R3 559 aa16.33■□□□□ 0.21
NPC1L1-203ENST00000423141 SHQ1Q6PI26 577 aaKnown RBP16.33■□□□□ 0.21
NPC1L1-203ENST00000423141 SCD5Q86SK9 330 aa16.33■□□□□ 0.21
NPC1L1-203ENST00000423141 LRRTM3Q86VH5 581 aa16.33■□□□□ 0.21
NPC1L1-203ENST00000423141 CIR1Q86X95 450 aaPredicted RBP16.33■□□□□ 0.21
NPC1L1-203ENST00000423141 UMODL1-AS1Q8N2C9 162 aa16.33■□□□□ 0.21
NPC1L1-203ENST00000423141 ELMOD1Q8N336 334 aa16.33■□□□□ 0.21
NPC1L1-203ENST00000423141 OR4F6Q8NGB9 312 aa16.33■□□□□ 0.21
NPC1L1-203ENST00000423141 TADA1Q96BN2 335 aa16.33■□□□□ 0.21
NPC1L1-203ENST00000423141 LINGO1Q96FE5 620 aa16.33■□□□□ 0.21
NPC1L1-203ENST00000423141 DHRS1Q96LJ7 313 aa16.33■□□□□ 0.21
NPC1L1-203ENST00000423141 MMP27Q9H306 513 aa16.33■□□□□ 0.21
NPC1L1-203ENST00000423141 ZFP14Q9HCL3 533 aa16.33■□□□□ 0.21
NPC1L1-203ENST00000423141 MIOSQ9NXC5 875 aa16.33■□□□□ 0.21
NPC1L1-203ENST00000423141 PIM2Q9P1W9 311 aa16.33■□□□□ 0.21
NPC1L1-203ENST00000423141 EIF3LQ9Y262 564 aaKnown RBP16.33■□□□□ 0.21
NPC1L1-203ENST00000423141 COL4A4P53420 1690 aaPredicted RBP16.33■□□□□ 0.2
NPC1L1-203ENST00000423141 PLXNB2O15031 1838 aa16.33■□□□□ 0.2
NPC1L1-203ENST00000423141 CLDN24A6NM45 220 aa16.33■□□□□ 0.2
NPC1L1-203ENST00000423141 DSCR3O14972 297 aa16.33■□□□□ 0.2
NPC1L1-203ENST00000423141 AIREO43918 545 aa16.33■□□□□ 0.2
NPC1L1-203ENST00000423141 PTTG1O95997 202 aa16.33■□□□□ 0.2
NPC1L1-203ENST00000423141 MYCLP1P12525 358 aaPredicted RBP16.33■□□□□ 0.2
NPC1L1-203ENST00000423141 GADD45AP24522 165 aa16.33■□□□□ 0.2
NPC1L1-203ENST00000423141 MAD2L1BPQ15013 274 aaPredicted RBP16.33■□□□□ 0.2
NPC1L1-203ENST00000423141 PLEKHG6Q3KR16 790 aa16.33■□□□□ 0.2
NPC1L1-203ENST00000423141 TIGD5Q53EQ6 642 aa16.33■□□□□ 0.2
NPC1L1-203ENST00000423141 TPRG1LQ5T0D9 272 aa16.33■□□□□ 0.2
NPC1L1-203ENST00000423141 TMEM86AQ8N2M4 240 aa16.33■□□□□ 0.2
NPC1L1-203ENST00000423141 PARVBQ9HBI1 364 aa16.33■□□□□ 0.2
NPC1L1-203ENST00000423141 TMEM45AQ9NWC5 275 aa16.33■□□□□ 0.2
NPC1L1-203ENST00000423141 SPO11Q9Y5K1 396 aa16.33■□□□□ 0.2
NPC1L1-203ENST00000423141 OR7A17O14581 309 aa16.33■□□□□ 0.2
NPC1L1-203ENST00000423141 HOXC11O43248 304 aaPredicted RBP16.33■□□□□ 0.2
NPC1L1-203ENST00000423141 IDH3BO43837 385 aa16.33■□□□□ 0.2
NPC1L1-203ENST00000423141 HOXA9P31269 272 aa16.33■□□□□ 0.2
NPC1L1-203ENST00000423141 GRK5P34947 590 aa16.33■□□□□ 0.2
NPC1L1-203ENST00000423141 FADDQ13158 208 aa16.33■□□□□ 0.2
NPC1L1-203ENST00000423141 MOB2Q70IA6 237 aa16.33■□□□□ 0.2
NPC1L1-203ENST00000423141 GALNT10Q86SR1 603 aa16.33■□□□□ 0.2
NPC1L1-203ENST00000423141 ZDHHC21Q8IVQ6 265 aa16.33■□□□□ 0.2
NPC1L1-203ENST00000423141 LPPQ93052 612 aa16.33■□□□□ 0.2
NPC1L1-203ENST00000423141 KATNBL1Q9H079 304 aa16.33■□□□□ 0.2
NPC1L1-203ENST00000423141 SARS2Q9NP81 518 aaKnown RBP16.33■□□□□ 0.2
NPC1L1-203ENST00000423141 FARSBQ9NSD9 589 aaKnown RBP16.33■□□□□ 0.2
NPC1L1-203ENST00000423141 WDR70Q9NW82 654 aa16.33■□□□□ 0.2
NPC1L1-203ENST00000423141 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.33■□□□□ 0.2
NPC1L1-203ENST00000423141 TBC1D14Q9P2M4 693 aa16.33■□□□□ 0.2
NPC1L1-203ENST00000423141 UGT2A1Q9Y4X1 527 aa16.33■□□□□ 0.2
NPC1L1-203ENST00000423141 N6AMT1Q9Y5N5 214 aa16.33■□□□□ 0.2
NPC1L1-203ENST00000423141 ACTL7AQ9Y615 435 aa16.33■□□□□ 0.2
NPC1L1-203ENST00000423141 A0A096LPI6 279 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 SAGE2PA6NJ88 616 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 TAF4O00268 1085 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 TSPAN3O60637 253 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 NDUFS3O75489 264 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 WBP4O75554 376 aaKnown RBP16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 DNTTP04053 509 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 RETP07949 1114 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 MZF1P28698 734 aaPredicted RBP16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 C21orf33P30042 268 aaPredicted RBP16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 AKT1P31749 480 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 HTR7P34969 479 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 RACK1P63244 317 aaKnown RBP16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 HMGCS1Q01581 520 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 MVKQ03426 396 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 RUNDC3AQ59EK9 446 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 MFSD4BQ5TF39 518 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 TTC29Q8NA56 475 aaPredicted RBP16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 IL17RDQ8NFM7 739 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 OR4K2Q8NGD2 314 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 BRSK1Q8TDC3 778 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 PDLIM5Q96HC4 596 aaKnown RBP16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 PYURFQ96I23 114 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 RNF38Q9H0F5 515 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 MROH8Q9H579 483 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 ABCC13Q9NSE7 274 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 GBF1Q92538 1859 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 IQCF5A8MTL0 148 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 M0R082 166 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 FFAR3O14843 346 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 GPR42O15529 346 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 PCDHGA12O60330 932 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 ZNF682O95780 498 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 SNAI1O95863 264 aaPredicted RBP16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 C1QCP02747 245 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 PGRP06401 933 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 CXCR4P61073 352 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 CREMQ03060 361 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 KEAP1Q14145 624 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 FKBP9P1Q75LS8 142 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 GOLGA7Q7Z5G4 137 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 MILR1Q7Z6M3 343 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 PIANPQ8IYJ0 282 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 TEX26Q8N6G2 289 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 OR6J1Q8NGC5 347 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 HASPINQ8TF76 798 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 SLC38A4Q969I6 547 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 CDADC1Q9BWV3 514 aa16.32■□□□□ 0.2
NPC1L1-203ENST00000423141 ITPAQ9BY32 194 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms