RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 ADAMTSL4-AS1Q5T5F5 129 aa3.96□□□□□ -1.78
HMGB1P49-201ENST00000418882 ARHGEF16Q5VV41 709 aa3.96□□□□□ -1.78
HMGB1P49-201ENST00000418882 ENOSF1Q7L5Y1 443 aa3.96□□□□□ -1.78
HMGB1P49-201ENST00000418882 PIGZQ86VD9 579 aa3.96□□□□□ -1.78
HMGB1P49-201ENST00000418882 COMMD2Q86X83 199 aa3.96□□□□□ -1.78
HMGB1P49-201ENST00000418882 NPEPL1Q8NDH3 523 aa3.96□□□□□ -1.78
HMGB1P49-201ENST00000418882 APPL2Q8NEU8 664 aa3.96□□□□□ -1.78
HMGB1P49-201ENST00000418882 OR11H4Q8NGC9 324 aa3.96□□□□□ -1.78
HMGB1P49-201ENST00000418882 OR10S1Q8NGN2 331 aa3.96□□□□□ -1.78
HMGB1P49-201ENST00000418882 OR4C3Q8NH37 302 aa3.96□□□□□ -1.78
HMGB1P49-201ENST00000418882 CFAP61Q8NHU2 1237 aa3.96□□□□□ -1.78
HMGB1P49-201ENST00000418882 HPSE2Q8WWQ2 592 aa3.96□□□□□ -1.78
HMGB1P49-201ENST00000418882 JAKMIP2Q96AA8 810 aa3.96□□□□□ -1.78
HMGB1P49-201ENST00000418882 MS4A10Q96PG2 267 aa3.96□□□□□ -1.78
HMGB1P49-201ENST00000418882 KLHL4Q9C0H6 718 aa3.96□□□□□ -1.78
HMGB1P49-201ENST00000418882 EQTNQ9NQ60 294 aa3.96□□□□□ -1.78
HMGB1P49-201ENST00000418882 TAB2Q9NYJ8 693 aa3.96□□□□□ -1.78
HMGB1P49-201ENST00000418882 GDE1Q9NZC3 331 aa3.96□□□□□ -1.78
HMGB1P49-201ENST00000418882 DAPK2Q9UIK4 370 aa3.96□□□□□ -1.78
HMGB1P49-201ENST00000418882 MAGED1Q9Y5V3 778 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P49-201ENST00000418882 SH2B2O14492 632 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P49-201ENST00000418882 ZFAND5O76080 213 aa3.95□□□□□ -1.78
HMGB1P49-201ENST00000418882 IGLV1-44P01699 117 aa3.95□□□□□ -1.78
HMGB1P49-201ENST00000418882 PLA2G4BP0C869 781 aa3.95□□□□□ -1.78
HMGB1P49-201ENST00000418882 FAM157CP0CG43 387 aa3.95□□□□□ -1.78
HMGB1P49-201ENST00000418882 GJA1P17302 382 aa3.95□□□□□ -1.78
HMGB1P49-201ENST00000418882 MPZP25189 248 aa3.95□□□□□ -1.78
HMGB1P49-201ENST00000418882 CASP2P42575 452 aa3.95□□□□□ -1.78
HMGB1P49-201ENST00000418882 ZNF415Q09FC8 603 aa3.95□□□□□ -1.78
HMGB1P49-201ENST00000418882 IL11RAQ14626 422 aa3.95□□□□□ -1.78
HMGB1P49-201ENST00000418882 CCDC6Q16204 474 aa3.95□□□□□ -1.78
HMGB1P49-201ENST00000418882 UGP2Q16851 508 aa3.95□□□□□ -1.78
HMGB1P49-201ENST00000418882 C15orf59Q2T9L4 293 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P49-201ENST00000418882 ITPRIPL2Q3MIP1 535 aa3.95□□□□□ -1.78
HMGB1P49-201ENST00000418882 BMP2KLQ5H9B9 411 aa3.95□□□□□ -1.78
HMGB1P49-201ENST00000418882 ZC2HC1BQ5TFG8 222 aa3.95□□□□□ -1.78
HMGB1P49-201ENST00000418882 DNAAF5Q86Y56 855 aa3.95□□□□□ -1.78
HMGB1P49-201ENST00000418882 CFAP206Q8IYR0 622 aa3.95□□□□□ -1.78
HMGB1P49-201ENST00000418882 ZNF248Q8NDW4 579 aa3.95□□□□□ -1.78
HMGB1P49-201ENST00000418882 SPDL1Q96EA4 605 aa3.95□□□□□ -1.78
HMGB1P49-201ENST00000418882 DGAT2Q96PD7 388 aa3.95□□□□□ -1.78
HMGB1P49-201ENST00000418882 FGF22Q9HCT0 170 aa3.95□□□□□ -1.78
HMGB1P49-201ENST00000418882 PRMT7Q9NVM4 692 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P49-201ENST00000418882 ZDHHC2Q9UIJ5 367 aa3.95□□□□□ -1.78
HMGB1P49-201ENST00000418882 GRIP1Q9Y3R0 1128 aa3.95□□□□□ -1.78
HMGB1P49-201ENST00000418882 LOC100509620A0A075B734 347 aa3.94□□□□□ -1.78
HMGB1P49-201ENST00000418882 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.94□□□□□ -1.78
HMGB1P49-201ENST00000418882 A0A1W2PN81 502 aa3.94□□□□□ -1.78
HMGB1P49-201ENST00000418882 EML2O95834 649 aa3.94□□□□□ -1.78
HMGB1P49-201ENST00000418882 DANCRP0C864 163 aa3.94□□□□□ -1.78
HMGB1P49-201ENST00000418882 CHRNA7P36544 502 aa3.94□□□□□ -1.78
HMGB1P49-201ENST00000418882 ERVK11-1P61568 191 aa3.94□□□□□ -1.78
HMGB1P49-201ENST00000418882 MAT1AQ00266 395 aaKnown RBP3.94□□□□□ -1.78
HMGB1P49-201ENST00000418882 BECN1Q14457 450 aa3.94□□□□□ -1.78
HMGB1P49-201ENST00000418882 ZFP69Q49AA0 526 aa3.94□□□□□ -1.78
HMGB1P49-201ENST00000418882 SLC25A53Q5H9E4 307 aa3.94□□□□□ -1.78
HMGB1P49-201ENST00000418882 PWWP2BQ6NUJ5 590 aa3.94□□□□□ -1.78
HMGB1P49-201ENST00000418882 C16orf54Q6UWD8 224 aa3.94□□□□□ -1.78
HMGB1P49-201ENST00000418882 ADGRA1Q86SQ6 560 aa3.94□□□□□ -1.78
HMGB1P49-201ENST00000418882 MCUQ8NE86 351 aa3.94□□□□□ -1.78
HMGB1P49-201ENST00000418882 DDHD1Q8NEL9 900 aa3.94□□□□□ -1.78
HMGB1P49-201ENST00000418882 WBP2Q969T9 261 aa3.94□□□□□ -1.78
HMGB1P49-201ENST00000418882 PTERQ96BW5 349 aa3.94□□□□□ -1.78
HMGB1P49-201ENST00000418882 NXNL1Q96CM4 212 aa3.94□□□□□ -1.78
HMGB1P49-201ENST00000418882 GIMAP5Q96F15 307 aa3.94□□□□□ -1.78
HMGB1P49-201ENST00000418882 ART5Q96L15 291 aa3.94□□□□□ -1.78
HMGB1P49-201ENST00000418882 ZNF830Q96NB3 372 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P49-201ENST00000418882 ASCL2Q99929 193 aa3.94□□□□□ -1.78
HMGB1P49-201ENST00000418882 PIGQQ9BRB3 760 aa3.94□□□□□ -1.78
HMGB1P49-201ENST00000418882 CENPOQ9BU64 300 aa3.94□□□□□ -1.78
HMGB1P49-201ENST00000418882 SERINC1Q9NRX5 453 aa3.94□□□□□ -1.78
HMGB1P49-201ENST00000418882 INTS10Q9NVR2 710 aaKnown RBP3.94□□□□□ -1.78
HMGB1P49-201ENST00000418882 RASAL2Q9UJF2 1139 aa3.94□□□□□ -1.78
HMGB1P49-201ENST00000418882 A0A1B0GU03 582 aa3.93□□□□□ -1.78
HMGB1P49-201ENST00000418882 MEIOCA2RUB1 952 aa3.93□□□□□ -1.78
HMGB1P49-201ENST00000418882 PSMD14O00487 310 aa3.93□□□□□ -1.78
HMGB1P49-201ENST00000418882 SPRY1O43609 319 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P49-201ENST00000418882 ZNF500O60304 480 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P49-201ENST00000418882 PRKRAO75569 313 aaKnown RBP3.93□□□□□ -1.78
HMGB1P49-201ENST00000418882 CDC123O75794 336 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P49-201ENST00000418882 AP2A2O94973 939 aa3.93□□□□□ -1.78
HMGB1P49-201ENST00000418882 RAF1P04049 648 aa3.93□□□□□ -1.78
HMGB1P49-201ENST00000418882 ADRB2P07550 413 aa3.93□□□□□ -1.78
HMGB1P49-201ENST00000418882 SMIM18P0DKX4 95 aa3.93□□□□□ -1.78
HMGB1P49-201ENST00000418882 NR2F1P10589 423 aa3.93□□□□□ -1.78
HMGB1P49-201ENST00000418882 HSPA8P11142 646 aaKnown RBP3.93□□□□□ -1.78
HMGB1P49-201ENST00000418882 NNMTP40261 264 aa3.93□□□□□ -1.78
HMGB1P49-201ENST00000418882 PDX1P52945 283 aa3.93□□□□□ -1.78
HMGB1P49-201ENST00000418882 PMP22Q01453 160 aa3.93□□□□□ -1.78
HMGB1P49-201ENST00000418882 CDR2Q01850 454 aa3.93□□□□□ -1.78
HMGB1P49-201ENST00000418882 ITGA9Q13797 1035 aa3.93□□□□□ -1.78
HMGB1P49-201ENST00000418882 TUBB2AQ13885 445 aa3.93□□□□□ -1.78
HMGB1P49-201ENST00000418882 SNAPC1Q16533 368 aa3.93□□□□□ -1.78
HMGB1P49-201ENST00000418882 CBWD6Q4V339 395 aa3.93□□□□□ -1.78
HMGB1P49-201ENST00000418882 CBWD3Q5JTY5 395 aa3.93□□□□□ -1.78
HMGB1P49-201ENST00000418882 GARNL3Q5VVW2 1013 aa3.93□□□□□ -1.78
HMGB1P49-201ENST00000418882 Q6ZSR9 355 aa3.93□□□□□ -1.78
HMGB1P49-201ENST00000418882 TAF15Q92804 592 aaKnown RBP eCLIP3.93□□□□□ -1.78
HMGB1P49-201ENST00000418882 SPACA9Q96E40 222 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P49-201ENST00000418882 TUBB2BQ9BVA1 445 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms