RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 RAPSNQ13702 412 aa14.32□□□□□ -0.12
RPS28-201ENST00000417088 POU6F1Q14863 301 aa14.32□□□□□ -0.12
RPS28-201ENST00000417088 ARHGEF18Q6ZSZ5 1173 aa14.32□□□□□ -0.12
RPS28-201ENST00000417088 RAB43Q86YS6 212 aa14.32□□□□□ -0.12
RPS28-201ENST00000417088 LURAP1LQ8IV03 231 aa14.32□□□□□ -0.12
RPS28-201ENST00000417088 GPR135Q8IZ08 494 aa14.32□□□□□ -0.12
RPS28-201ENST00000417088 FAM71DQ8N9W8 422 aa14.32□□□□□ -0.12
RPS28-201ENST00000417088 FLVCR1-AS1Q8TAF5 88 aa14.32□□□□□ -0.12
RPS28-201ENST00000417088 SSC4DQ8WTU2 575 aa14.32□□□□□ -0.12
RPS28-201ENST00000417088 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.32□□□□□ -0.12
RPS28-201ENST00000417088 PNPLA2Q96AD5 504 aa14.32□□□□□ -0.12
RPS28-201ENST00000417088 TCTN2Q96GX1 697 aa14.32□□□□□ -0.12
RPS28-201ENST00000417088 OR2A14Q96R47 310 aa14.32□□□□□ -0.12
RPS28-201ENST00000417088 SPRTNQ9H040 489 aaPredicted RBP14.32□□□□□ -0.12
RPS28-201ENST00000417088 LRRC40Q9H9A6 602 aa14.32□□□□□ -0.12
RPS28-201ENST00000417088 PIH1D1Q9NWS0 290 aaKnown RBP14.32□□□□□ -0.12
RPS28-201ENST00000417088 SPHK1Q9NYA1 384 aa14.32□□□□□ -0.12
RPS28-201ENST00000417088 ASF1AQ9Y294 204 aa14.32□□□□□ -0.12
RPS28-201ENST00000417088 PADI2Q9Y2J8 665 aa14.32□□□□□ -0.12
RPS28-201ENST00000417088 REXO2Q9Y3B8 237 aaKnown RBP14.32□□□□□ -0.12
RPS28-201ENST00000417088 HIVEP3Q5T1R4 2406 aa14.32□□□□□ -0.12
RPS28-201ENST00000417088 FER1L5A0AVI2 2057 aa14.31□□□□□ -0.12
RPS28-201ENST00000417088 BTNL10A8MVZ5 291 aa14.31□□□□□ -0.12
RPS28-201ENST00000417088 LIN7AO14910 233 aaPredicted RBP14.31□□□□□ -0.12
RPS28-201ENST00000417088 OR2B3O76000 313 aa14.31□□□□□ -0.12
RPS28-201ENST00000417088 CTSBP07858 339 aa14.31□□□□□ -0.12
RPS28-201ENST00000417088 CHRM5P08912 532 aaPredicted RBP14.31□□□□□ -0.12
RPS28-201ENST00000417088 RNF224P0DH78 156 aa14.31□□□□□ -0.12
RPS28-201ENST00000417088 SHMT2P34897 504 aa14.31□□□□□ -0.12
RPS28-201ENST00000417088 NSG1P42857 185 aa14.31□□□□□ -0.12
RPS28-201ENST00000417088 MRPL49Q13405 166 aaKnown RBP14.31□□□□□ -0.12
RPS28-201ENST00000417088 ITIH4Q14624 930 aa14.31□□□□□ -0.12
RPS28-201ENST00000417088 BRD3Q15059 726 aa14.31□□□□□ -0.12
RPS28-201ENST00000417088 DEFB110Q30KQ9 67 aa14.31□□□□□ -0.12
RPS28-201ENST00000417088 C1orf189Q5VU69 101 aa14.31□□□□□ -0.12
RPS28-201ENST00000417088 MLIPQ5VWP3 458 aa14.31□□□□□ -0.12
RPS28-201ENST00000417088 MRGPREQ86SM8 312 aa14.31□□□□□ -0.12
RPS28-201ENST00000417088 HOOK3Q86VS8 718 aa14.31□□□□□ -0.12
RPS28-201ENST00000417088 TMTC1Q8IUR5 882 aa14.31□□□□□ -0.12
RPS28-201ENST00000417088 LRRC57Q8N9N7 239 aa14.31□□□□□ -0.12
RPS28-201ENST00000417088 N4BP2L2Q92802 583 aaPredicted RBP14.31□□□□□ -0.12
RPS28-201ENST00000417088 SGSM3Q96HU1 749 aa14.31□□□□□ -0.12
RPS28-201ENST00000417088 GBP5Q96PP8 586 aa14.31□□□□□ -0.12
RPS28-201ENST00000417088 C17orf62Q9BQA9 187 aa14.31□□□□□ -0.12
RPS28-201ENST00000417088 CHRNA10Q9GZZ6 450 aa14.31□□□□□ -0.12
RPS28-201ENST00000417088 LACRTQ9GZZ8 138 aa14.31□□□□□ -0.12
RPS28-201ENST00000417088 C5AR2Q9P296 337 aa14.31□□□□□ -0.12
RPS28-201ENST00000417088 AP1M2Q9Y6Q5 423 aa14.31□□□□□ -0.12
RPS28-201ENST00000417088 SLC5A10A0PJK1 596 aa14.3□□□□□ -0.12
RPS28-201ENST00000417088 CCDC78A2IDD5 438 aa14.3□□□□□ -0.12
RPS28-201ENST00000417088 GRID2IPA4D2P6 1211 aa14.3□□□□□ -0.12
RPS28-201ENST00000417088 MROH6A6NGR9 719 aa14.3□□□□□ -0.12
RPS28-201ENST00000417088 OR51F1A6NGY5 319 aa14.3□□□□□ -0.12
RPS28-201ENST00000417088 BHMG1C9JSJ3 638 aaPredicted RBP14.3□□□□□ -0.12
RPS28-201ENST00000417088 FTH1P02794 183 aa14.3□□□□□ -0.12
RPS28-201ENST00000417088 GDF10P55107 478 aa14.3□□□□□ -0.12
RPS28-201ENST00000417088 SSPNQ14714 243 aa14.3□□□□□ -0.12
RPS28-201ENST00000417088 EIF2S3LQ2VIR3 472 aaKnown RBP14.3□□□□□ -0.12
RPS28-201ENST00000417088 VWA5B1Q5TIE3 1220 aa14.3□□□□□ -0.12
RPS28-201ENST00000417088 RHBDD2Q6NTF9 364 aa14.3□□□□□ -0.12
RPS28-201ENST00000417088 NAPRTQ6XQN6 538 aa14.3□□□□□ -0.12
RPS28-201ENST00000417088 TBC1D21Q8IYX1 336 aa14.3□□□□□ -0.12
RPS28-201ENST00000417088 TTC13Q8NBP0 860 aa14.3□□□□□ -0.12
RPS28-201ENST00000417088 ELMO1Q92556 727 aa14.3□□□□□ -0.12
RPS28-201ENST00000417088 IP6K3Q96PC2 410 aa14.3□□□□□ -0.12
RPS28-201ENST00000417088 PANX2Q96RD6 677 aa14.3□□□□□ -0.12
RPS28-201ENST00000417088 CUEDC1Q9NWM3 386 aaPredicted RBP14.3□□□□□ -0.12
RPS28-201ENST00000417088 OR6C2Q9NZP2 312 aa14.3□□□□□ -0.12
RPS28-201ENST00000417088 POLG2Q9UHN1 485 aa14.3□□□□□ -0.12
RPS28-201ENST00000417088 TDRKHQ9Y2W6 561 aaKnown RBP14.3□□□□□ -0.12
RPS28-201ENST00000417088 PTRH2Q9Y3E5 179 aaKnown RBP14.3□□□□□ -0.12
RPS28-201ENST00000417088 A0A0J9YY10 115 aa14.29□□□□□ -0.12
RPS28-201ENST00000417088 QSOX1O00391 747 aa14.29□□□□□ -0.12
RPS28-201ENST00000417088 PSMD3O43242 534 aa14.29□□□□□ -0.12
RPS28-201ENST00000417088 CNOT3O75175 753 aaKnown RBP14.29□□□□□ -0.12
RPS28-201ENST00000417088 AP2A1O95782 977 aa14.29□□□□□ -0.12
RPS28-201ENST00000417088 MSNP26038 577 aaKnown RBP14.29□□□□□ -0.12
RPS28-201ENST00000417088 VARSP26640 1264 aaKnown RBP14.29□□□□□ -0.12
RPS28-201ENST00000417088 FOXN2P32314 431 aa14.29□□□□□ -0.12
RPS28-201ENST00000417088 FOLR3P41439 243 aa14.29□□□□□ -0.12
RPS28-201ENST00000417088 DCDP81605 110 aaKnown RBP14.29□□□□□ -0.12
RPS28-201ENST00000417088 KYNUQ16719 465 aa14.29□□□□□ -0.12
RPS28-201ENST00000417088 PLEKHN1Q494U1 663 aaPredicted RBP14.29□□□□□ -0.12
RPS28-201ENST00000417088 PACS1Q6VY07 963 aa14.29□□□□□ -0.12
RPS28-201ENST00000417088 RAD9BQ6WBX8 426 aa14.29□□□□□ -0.12
RPS28-201ENST00000417088 DNAJC22Q8N4W6 341 aa14.29□□□□□ -0.12
RPS28-201ENST00000417088 TAB3Q8N5C8 712 aaPredicted RBP14.29□□□□□ -0.12
RPS28-201ENST00000417088 OR5K2Q8NHB8 316 aa14.29□□□□□ -0.12
RPS28-201ENST00000417088 SLC35B2Q8TB61 432 aa14.29□□□□□ -0.12
RPS28-201ENST00000417088 PROKR1Q8TCW9 393 aa14.29□□□□□ -0.12
RPS28-201ENST00000417088 C19orf60Q96EN9 201 aa14.29□□□□□ -0.12
RPS28-201ENST00000417088 FER1L6-AS2Q96M78 137 aa14.29□□□□□ -0.12
RPS28-201ENST00000417088 ALS2CR12Q96Q35 445 aa14.29□□□□□ -0.12
RPS28-201ENST00000417088 SLC29A3Q9BZD2 475 aa14.29□□□□□ -0.12
RPS28-201ENST00000417088 CASS4Q9NQ75 786 aa14.29□□□□□ -0.12
RPS28-201ENST00000417088 MAP10Q9P2G4 905 aa14.29□□□□□ -0.12
RPS28-201ENST00000417088 IFT80Q9P2H3 777 aaPredicted RBP14.29□□□□□ -0.12
RPS28-201ENST00000417088 DHCR7Q9UBM7 475 aaKnown RBP14.29□□□□□ -0.12
RPS28-201ENST00000417088 GPN3Q9UHW5 284 aaPredicted RBP14.29□□□□□ -0.12
RPS28-201ENST00000417088 PLAGL1Q9UM63 463 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms