RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 DEFB110Q30KQ9 67 aa13.95□□□□□ -0.18
PAF1-202ENST00000416728 SYTL3Q4VX76 610 aa13.95□□□□□ -0.18
PAF1-202ENST00000416728 MLIPQ5VWP3 458 aa13.95□□□□□ -0.18
PAF1-202ENST00000416728 ZNF385CQ66K41 422 aaPredicted RBP13.95□□□□□ -0.18
PAF1-202ENST00000416728 SLC6A19Q695T7 634 aa13.95□□□□□ -0.18
PAF1-202ENST00000416728 PEX26Q7Z412 305 aa13.95□□□□□ -0.18
PAF1-202ENST00000416728 TBC1D21Q8IYX1 336 aa13.95□□□□□ -0.18
PAF1-202ENST00000416728 UBL4BQ8N7F7 174 aa13.95□□□□□ -0.18
PAF1-202ENST00000416728 IP6K3Q96PC2 410 aa13.95□□□□□ -0.18
PAF1-202ENST00000416728 OR2A14Q96R47 310 aa13.95□□□□□ -0.18
PAF1-202ENST00000416728 OR6C2Q9NZP2 312 aa13.95□□□□□ -0.18
PAF1-202ENST00000416728 GPN3Q9UHW5 284 aaPredicted RBP13.95□□□□□ -0.18
PAF1-202ENST00000416728 AMFRQ9UKV5 643 aa13.95□□□□□ -0.18
PAF1-202ENST00000416728 TDRKHQ9Y2W6 561 aaKnown RBP13.95□□□□□ -0.18
PAF1-202ENST00000416728 REXO2Q9Y3B8 237 aaKnown RBP13.95□□□□□ -0.18
PAF1-202ENST00000416728 PRSS21Q9Y6M0 314 aa13.95□□□□□ -0.18
PAF1-202ENST00000416728 A0A0J9YY10 115 aa13.94□□□□□ -0.18
PAF1-202ENST00000416728 MROH6A6NGR9 719 aa13.94□□□□□ -0.18
PAF1-202ENST00000416728 OR51F1A6NGY5 319 aa13.94□□□□□ -0.18
PAF1-202ENST00000416728 KDM1AO60341 852 aa13.94□□□□□ -0.18
PAF1-202ENST00000416728 KLF7O75840 302 aaPredicted RBP13.94□□□□□ -0.18
PAF1-202ENST00000416728 CHRM5P08912 532 aaPredicted RBP13.94□□□□□ -0.18
PAF1-202ENST00000416728 CBSLP0DN79 551 aa13.94□□□□□ -0.18
PAF1-202ENST00000416728 VARSP26640 1264 aaKnown RBP13.94□□□□□ -0.18
PAF1-202ENST00000416728 ACADLP28330 430 aa13.94□□□□□ -0.18
PAF1-202ENST00000416728 CBSP35520 551 aa13.94□□□□□ -0.18
PAF1-202ENST00000416728 GDF10P55107 478 aa13.94□□□□□ -0.18
PAF1-202ENST00000416728 PLOD1Q02809 727 aaPredicted RBP13.94□□□□□ -0.18
PAF1-202ENST00000416728 RAPSNQ13702 412 aa13.94□□□□□ -0.18
PAF1-202ENST00000416728 ZIC1Q15915 447 aa13.94□□□□□ -0.18
PAF1-202ENST00000416728 KYNUQ16719 465 aa13.94□□□□□ -0.18
PAF1-202ENST00000416728 C4orf17Q53FE4 359 aa13.94□□□□□ -0.18
PAF1-202ENST00000416728 PRR30Q53SZ7 412 aaPredicted RBP13.94□□□□□ -0.18
PAF1-202ENST00000416728 C1orf189Q5VU69 101 aa13.94□□□□□ -0.18
PAF1-202ENST00000416728 RHBDD2Q6NTF9 364 aa13.94□□□□□ -0.18
PAF1-202ENST00000416728 PACS1Q6VY07 963 aa13.94□□□□□ -0.18
PAF1-202ENST00000416728 RAD9BQ6WBX8 426 aa13.94□□□□□ -0.18
PAF1-202ENST00000416728 MRGPREQ86SM8 312 aa13.94□□□□□ -0.18
PAF1-202ENST00000416728 KIAA1328Q86T90 577 aa13.94□□□□□ -0.18
PAF1-202ENST00000416728 LINC00523Q86TU6 105 aa13.94□□□□□ -0.18
PAF1-202ENST00000416728 TAB3Q8N5C8 712 aaPredicted RBP13.94□□□□□ -0.18
PAF1-202ENST00000416728 Q8NA96 180 aa13.94□□□□□ -0.18
PAF1-202ENST00000416728 ACRBPQ8NEB7 543 aa13.94□□□□□ -0.18
PAF1-202ENST00000416728 OR5K2Q8NHB8 316 aa13.94□□□□□ -0.18
PAF1-202ENST00000416728 PROKR1Q8TCW9 393 aa13.94□□□□□ -0.18
PAF1-202ENST00000416728 PNPLA2Q96AD5 504 aa13.94□□□□□ -0.18
PAF1-202ENST00000416728 SMAD5Q99717 465 aaKnown RBP13.94□□□□□ -0.18
PAF1-202ENST00000416728 TMEM121Q9BTD3 319 aa13.94□□□□□ -0.18
PAF1-202ENST00000416728 SLC29A3Q9BZD2 475 aa13.94□□□□□ -0.18
PAF1-202ENST00000416728 CHRNA10Q9GZZ6 450 aa13.94□□□□□ -0.18
PAF1-202ENST00000416728 SPHK1Q9NYA1 384 aa13.94□□□□□ -0.18
PAF1-202ENST00000416728 MAP10Q9P2G4 905 aa13.94□□□□□ -0.18
PAF1-202ENST00000416728 USP9YO00507 2555 aaPredicted RBP13.93□□□□□ -0.18
PAF1-202ENST00000416728 SLC5A10A0PJK1 596 aa13.93□□□□□ -0.18
PAF1-202ENST00000416728 CCDC162PA2VCL2 907 aa13.93□□□□□ -0.18
PAF1-202ENST00000416728 MIF4GDA9UHW6 222 aaKnown RBP13.93□□□□□ -0.18
PAF1-202ENST00000416728 F8W8V4 182 aa13.93□□□□□ -0.18
PAF1-202ENST00000416728 PEX12O00623 359 aa13.93□□□□□ -0.18
PAF1-202ENST00000416728 ZSCAN9O15535 394 aaPredicted RBP13.93□□□□□ -0.18
PAF1-202ENST00000416728 GAS8O95995 478 aa13.93□□□□□ -0.18
PAF1-202ENST00000416728 CD63P08962 238 aa13.93□□□□□ -0.18
PAF1-202ENST00000416728 OR56A5P0C7T3 313 aa13.93□□□□□ -0.18
PAF1-202ENST00000416728 ATXN8OSP0DMR3 200 aa13.93□□□□□ -0.18
PAF1-202ENST00000416728 PSMA3P25788 255 aa13.93□□□□□ -0.18
PAF1-202ENST00000416728 FOXN2P32314 431 aa13.93□□□□□ -0.18
PAF1-202ENST00000416728 FOLR3P41439 243 aa13.93□□□□□ -0.18
PAF1-202ENST00000416728 DCDP81605 110 aaKnown RBP13.93□□□□□ -0.18
PAF1-202ENST00000416728 KLF1Q13351 362 aaPredicted RBP13.93□□□□□ -0.18
PAF1-202ENST00000416728 SSPNQ14714 243 aa13.93□□□□□ -0.18
PAF1-202ENST00000416728 CCDC38Q502W7 563 aa13.93□□□□□ -0.18
PAF1-202ENST00000416728 VWA5B1Q5TIE3 1220 aa13.93□□□□□ -0.18
PAF1-202ENST00000416728 NAPRTQ6XQN6 538 aa13.93□□□□□ -0.18
PAF1-202ENST00000416728 SYCE1Q8N0S2 351 aa13.93□□□□□ -0.18
PAF1-202ENST00000416728 RBMXL3Q8N7X1 1067 aaKnown RBP13.93□□□□□ -0.18
PAF1-202ENST00000416728 DNAAF3Q8N9W5 541 aa13.93□□□□□ -0.18
PAF1-202ENST00000416728 CLEC1AQ8NC01 280 aa13.93□□□□□ -0.18
PAF1-202ENST00000416728 SLC35B2Q8TB61 432 aa13.93□□□□□ -0.18
PAF1-202ENST00000416728 SSC4DQ8WTU2 575 aa13.93□□□□□ -0.18
PAF1-202ENST00000416728 FER1L6-AS2Q96M78 137 aa13.93□□□□□ -0.18
PAF1-202ENST00000416728 GBP5Q96PP8 586 aa13.93□□□□□ -0.18
PAF1-202ENST00000416728 TTC1Q99614 292 aa13.93□□□□□ -0.18
PAF1-202ENST00000416728 SPRTNQ9H040 489 aaPredicted RBP13.93□□□□□ -0.18
PAF1-202ENST00000416728 TXLNGQ9NUQ3 528 aa13.93□□□□□ -0.18
PAF1-202ENST00000416728 IRAK4Q9NWZ3 460 aa13.93□□□□□ -0.18
PAF1-202ENST00000416728 C5AR2Q9P296 337 aa13.93□□□□□ -0.18
PAF1-202ENST00000416728 IFT80Q9P2H3 777 aaPredicted RBP13.93□□□□□ -0.18
PAF1-202ENST00000416728 NDOR1Q9UHB4 597 aa13.93□□□□□ -0.18
PAF1-202ENST00000416728 PACSIN2Q9UNF0 486 aaPredicted RBP13.93□□□□□ -0.18
PAF1-202ENST00000416728 SRPK3Q9UPE1 567 aa13.93□□□□□ -0.18
PAF1-202ENST00000416728 R3HDM2Q9Y2K5 976 aaKnown RBP13.93□□□□□ -0.18
PAF1-202ENST00000416728 PTRH2Q9Y3E5 179 aaKnown RBP13.93□□□□□ -0.18
PAF1-202ENST00000416728 TNRC6AQ8NDV7 1962 aaKnown RBP13.92□□□□□ -0.18
PAF1-202ENST00000416728 USP9XQ93008 2570 aaPredicted RBP13.92□□□□□ -0.18
PAF1-202ENST00000416728 ISM1B1AKI9 464 aa13.92□□□□□ -0.18
PAF1-202ENST00000416728 BHMG1C9JSJ3 638 aaPredicted RBP13.92□□□□□ -0.18
PAF1-202ENST00000416728 H3BMH7 237 aa13.92□□□□□ -0.18
PAF1-202ENST00000416728 HCRTR1O43613 425 aa13.92□□□□□ -0.18
PAF1-202ENST00000416728 IGHEP01854 428 aa13.92□□□□□ -0.18
PAF1-202ENST00000416728 ALPPP05187 535 aa13.92□□□□□ -0.18
PAF1-202ENST00000416728 GABRA4P48169 554 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms