RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 UAP1Q16222 522 aaPredicted RBP3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 RPE65Q16518 533 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 AP5B1Q2VPB7 878 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 ELOA3BQ3SY89 546 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 POM121L1PQ3SYA9 428 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 FAM174BQ3ZCQ3 159 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 ZNF568Q3ZCX4 644 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 CERKLQ49MI3 558 aaPredicted RBP3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 HIKESHIQ53FT3 197 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 PDLIM3Q53GG5 364 aaPredicted RBP3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 TTMPQ5BVD1 217 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 PDZK1Q5T2W1 519 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 CERCAMQ5T4B2 595 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 GRTP1Q5TC63 336 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 SERTAD4-AS1Q5TG53 156 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 VWA5B1Q5TIE3 1220 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 SPATA31A1Q5TZJ5 1347 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 AGBL2Q5U5Z8 902 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 SPATA31A5Q5VU36 1347 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 RAET1LQ5VY80 246 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 TXNDC8Q6A555 127 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 ARMC6Q6NXE6 501 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 TTC27Q6P3X3 843 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 FAM173BQ6P4H8 233 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 C17orf99Q6UX52 265 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 CLEC17AQ6ZS10 378 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 FRA10AC1Q70Z53 315 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 NLRP9Q7RTR0 991 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 TRPM8Q7Z2W7 1104 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 ZNF572Q7Z3I7 529 aaPredicted RBP3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 GDF7Q7Z4P5 450 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 PPP1R32Q7Z5V6 425 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 GRASPQ7Z6J2 395 aaPredicted RBP3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 YRDCQ86U90 279 aaKnown RBP3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 CIR1Q86X95 450 aaPredicted RBP3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 PLCZ1Q86YW0 608 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 NUDCD3Q8IVD9 361 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 SPATA31A7Q8IWB4 1347 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 KLHDC8AQ8IYD2 350 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 ST13P4Q8IZP2 240 aaPredicted RBP3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 FAM58AQ8N1B3 248 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 LRRC75A-AS1Q8N1F1 130 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 SYNE4Q8N205 404 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 MFSD4AQ8N468 514 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 TP53I13Q8NBR0 393 aaPredicted RBP3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 CSNK2A3Q8NEV1 391 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 FLAD1Q8NFF5 587 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 ELOA3Q8NG57 546 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 OR4C5Q8NGB2 326 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 CCDC26Q8TAB7 109 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 NDNFQ8TB73 568 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 IGDCC4Q8TDY8 1250 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 TRPC4APQ8TEL6 797 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 GLYATL2Q8WU03 294 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 ZCCHC14Q8WYQ9 949 aaKnown RBP3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 LPIN2Q92539 896 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 NSMAFQ92636 917 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 RIT1Q92963 219 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 OPTNQ96CV9 577 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 ERLEC1Q96DZ1 483 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 SNF8Q96H20 258 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 AJUBAQ96IF1 538 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 ZNF48Q96MX3 618 aaPredicted RBP3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 FOXN4Q96NZ1 517 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 PSMG3-AS1Q96PY0 264 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 KRT12Q99456 494 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 TMEM43Q9BTV4 400 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 SCNM1Q9BWG6 230 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 BBS2Q9BXC9 721 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 C1QTNF3Q9BXJ4 246 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 AMNQ9BXJ7 453 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 FSD1LQ9BXM9 530 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 IL22Q9GZX6 179 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 MTIF3Q9H2K0 278 aaKnown RBP3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 KCNK15Q9H427 330 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 CUEDC2Q9H467 287 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 RAD21L1Q9H4I0 556 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 TMEM185BQ9H7F4 350 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 ACTR8Q9H981 624 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 SGK2Q9HBY8 427 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 APMAPQ9HDC9 416 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 KCNMB3Q9NPA1 279 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 NT5MQ9NPB1 228 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 PDGFCQ9NRA1 345 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 PLK2Q9NYY3 685 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 LMCD1Q9NZU5 365 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 GCNT4Q9P109 453 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 RNF14Q9UBS8 474 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 NXF1Q9UBU9 619 aaKnown RBP3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 STK17AQ9UEE5 414 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 STEAP1Q9UHE8 339 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 DNAI1Q9UI46 699 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 FZD10Q9ULW2 581 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 PACSIN2Q9UNF0 486 aaPredicted RBP3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 ERVK-11Q9UQG0 969 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 CFL2Q9Y281 166 aa3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.06□□□□□ -1.92
CTDSPL-203ENST00000416688 TTC21AQ8NDW8 1320 aa3.05□□□□□ -1.92
CTDSPL-203ENST00000416688 A0A087WUV0 522 aaPredicted RBP3.05□□□□□ -1.92
CTDSPL-203ENST00000416688 FAM237AA0A1B0GTK4 181 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms