RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 CARD6Q9BX69 1037 aa17.02■□□□□ 0.32
PDLIM2-208ENST00000416159 NLNQ9BYT8 704 aa17.02■□□□□ 0.32
PDLIM2-208ENST00000416159 SLC7A5P2Q9GIP4 190 aa17.02■□□□□ 0.32
PDLIM2-208ENST00000416159 OR6C2Q9NZP2 312 aa17.02■□□□□ 0.32
PDLIM2-208ENST00000416159 TDRKHQ9Y2W6 561 aaKnown RBP17.02■□□□□ 0.32
PDLIM2-208ENST00000416159 BSNQ9UPA5 3926 aa17.01■□□□□ 0.31
PDLIM2-208ENST00000416159 E7EQ34 232 aa17.01■□□□□ 0.31
PDLIM2-208ENST00000416159 CHRM5P08912 532 aaPredicted RBP17.01■□□□□ 0.31
PDLIM2-208ENST00000416159 UGT2B7P16662 529 aa17.01■□□□□ 0.31
PDLIM2-208ENST00000416159 RPL22P35268 128 aaKnown RBP17.01■□□□□ 0.31
PDLIM2-208ENST00000416159 SIX1Q15475 284 aaPredicted RBP17.01■□□□□ 0.31
PDLIM2-208ENST00000416159 DNAJC21Q5F1R6 531 aaKnown RBP17.01■□□□□ 0.31
PDLIM2-208ENST00000416159 AARS2Q5JTZ9 985 aaKnown RBP17.01■□□□□ 0.31
PDLIM2-208ENST00000416159 CDHR3Q6ZTQ4 885 aa17.01■□□□□ 0.31
PDLIM2-208ENST00000416159 GPR135Q8IZ08 494 aa17.01■□□□□ 0.31
PDLIM2-208ENST00000416159 C19orf47Q8N9M1 422 aaKnown RBP17.01■□□□□ 0.31
PDLIM2-208ENST00000416159 GLIS1Q8NBF1 620 aa17.01■□□□□ 0.31
PDLIM2-208ENST00000416159 N4BP2L2Q92802 583 aaPredicted RBP17.01■□□□□ 0.31
PDLIM2-208ENST00000416159 OR2A14Q96R47 310 aa17.01■□□□□ 0.31
PDLIM2-208ENST00000416159 DPH2Q9BQC3 489 aaPredicted RBP17.01■□□□□ 0.31
PDLIM2-208ENST00000416159 AP1M1Q9BXS5 423 aa17.01■□□□□ 0.31
PDLIM2-208ENST00000416159 CHRNA10Q9GZZ6 450 aa17.01■□□□□ 0.31
PDLIM2-208ENST00000416159 KLHL25Q9H0H3 589 aa17.01■□□□□ 0.31
PDLIM2-208ENST00000416159 EIF2B3Q9NR50 452 aaKnown RBP17.01■□□□□ 0.31
PDLIM2-208ENST00000416159 PCMTD2Q9NV79 361 aa17.01■□□□□ 0.31
PDLIM2-208ENST00000416159 ZKSCAN5Q9Y2L8 839 aa17.01■□□□□ 0.31
PDLIM2-208ENST00000416159 AP3B1O00203 1094 aa17■□□□□ 0.31
PDLIM2-208ENST00000416159 CCDC175P0C221 793 aa17■□□□□ 0.31
PDLIM2-208ENST00000416159 ZSCAN5DPP0CG00 497 aa17■□□□□ 0.31
PDLIM2-208ENST00000416159 TPBGLP0DKB5 382 aa17■□□□□ 0.31
PDLIM2-208ENST00000416159 CCR7P32248 378 aa17■□□□□ 0.31
PDLIM2-208ENST00000416159 LCN10Q6JVE6 187 aa17■□□□□ 0.31
PDLIM2-208ENST00000416159 ASB18Q6ZVZ8 466 aa17■□□□□ 0.31
PDLIM2-208ENST00000416159 SYTL1Q8IYJ3 562 aa17■□□□□ 0.31
PDLIM2-208ENST00000416159 SLC22A15Q8IZD6 547 aa17■□□□□ 0.31
PDLIM2-208ENST00000416159 ENDOVQ8N8Q3 282 aaKnown RBP17■□□□□ 0.31
PDLIM2-208ENST00000416159 TEX19Q8NA77 164 aa17■□□□□ 0.31
PDLIM2-208ENST00000416159 ASZ1Q8WWH4 475 aa17■□□□□ 0.31
PDLIM2-208ENST00000416159 ACSS2Q9NR19 701 aa17■□□□□ 0.31
PDLIM2-208ENST00000416159 SNX7Q9UNH6 387 aa17■□□□□ 0.31
PDLIM2-208ENST00000416159 MED13Q9UHV7 2174 aa16.99■□□□□ 0.31
PDLIM2-208ENST00000416159 A0A0J9YY10 115 aa16.99■□□□□ 0.31
PDLIM2-208ENST00000416159 K7EM74 188 aa16.99■□□□□ 0.31
PDLIM2-208ENST00000416159 ZNF749O43361 778 aa16.99■□□□□ 0.31
PDLIM2-208ENST00000416159 GPC4O75487 556 aa16.99■□□□□ 0.31
PDLIM2-208ENST00000416159 RPN2P04844 631 aa16.99■□□□□ 0.31
PDLIM2-208ENST00000416159 APOA4P06727 396 aa16.99■□□□□ 0.31
PDLIM2-208ENST00000416159 NR1D1P20393 614 aa16.99■□□□□ 0.31
PDLIM2-208ENST00000416159 AGXTP21549 392 aa16.99■□□□□ 0.31
PDLIM2-208ENST00000416159 NPY2RP49146 381 aa16.99■□□□□ 0.31
PDLIM2-208ENST00000416159 TTPAP49638 278 aa16.99■□□□□ 0.31
PDLIM2-208ENST00000416159 CSE1LP55060 971 aaKnown RBP16.99■□□□□ 0.31
PDLIM2-208ENST00000416159 SESN2P58004 480 aaPredicted RBP16.99■□□□□ 0.31
PDLIM2-208ENST00000416159 HSPA14Q0VDF9 509 aa16.99■□□□□ 0.31
PDLIM2-208ENST00000416159 IL10RAQ13651 578 aa16.99■□□□□ 0.31
PDLIM2-208ENST00000416159 SEMA3AQ14563 771 aa16.99■□□□□ 0.31
PDLIM2-208ENST00000416159 KIR2DS3Q14952 304 aa16.99■□□□□ 0.31
PDLIM2-208ENST00000416159 SLC5A12Q1EHB4 618 aa16.99■□□□□ 0.31
PDLIM2-208ENST00000416159 GSTA5Q7RTV2 222 aa16.99■□□□□ 0.31
PDLIM2-208ENST00000416159 TRIM73Q86UV7 250 aa16.99■□□□□ 0.31
PDLIM2-208ENST00000416159 TRIM55Q9BYV6 548 aa16.99■□□□□ 0.31
PDLIM2-208ENST00000416159 IL22Q9GZX6 179 aa16.99■□□□□ 0.31
PDLIM2-208ENST00000416159 FAM60AQ9NP50 221 aa16.99■□□□□ 0.31
PDLIM2-208ENST00000416159 LZTFL1Q9NQ48 299 aa16.99■□□□□ 0.31
PDLIM2-208ENST00000416159 CHRAC1Q9NRG0 131 aa16.99■□□□□ 0.31
PDLIM2-208ENST00000416159 CATSPERZQ9NTU4 200 aa16.99■□□□□ 0.31
PDLIM2-208ENST00000416159 SPHK1Q9NYA1 384 aa16.99■□□□□ 0.31
PDLIM2-208ENST00000416159 BFARQ9NZS9 450 aa16.99■□□□□ 0.31
PDLIM2-208ENST00000416159 TCFL5Q9UL49 500 aa16.99■□□□□ 0.31
PDLIM2-208ENST00000416159 AP1M2Q9Y6Q5 423 aa16.99■□□□□ 0.31
PDLIM2-208ENST00000416159 TENM4Q6N022 2769 aa16.98■□□□□ 0.31
PDLIM2-208ENST00000416159 ARGFXA6NJG6 315 aa16.98■□□□□ 0.31
PDLIM2-208ENST00000416159 ISM1B1AKI9 464 aa16.98■□□□□ 0.31
PDLIM2-208ENST00000416159 PRMT5O14744 637 aaPredicted RBP16.98■□□□□ 0.31
PDLIM2-208ENST00000416159 CD3EAPO15446 510 aaKnown RBP16.98■□□□□ 0.31
PDLIM2-208ENST00000416159 DNAJB5O75953 348 aa16.98■□□□□ 0.31
PDLIM2-208ENST00000416159 FGGP02679 453 aa16.98■□□□□ 0.31
PDLIM2-208ENST00000416159 CAPN1P07384 714 aa16.98■□□□□ 0.31
PDLIM2-208ENST00000416159 BASP1P80723 227 aaKnown RBP16.98■□□□□ 0.31
PDLIM2-208ENST00000416159 FOXK1P85037 733 aa16.98■□□□□ 0.31
PDLIM2-208ENST00000416159 KYNUQ16719 465 aa16.98■□□□□ 0.31
PDLIM2-208ENST00000416159 PTCHD3Q3KNS1 767 aa16.98■□□□□ 0.31
PDLIM2-208ENST00000416159 FAM198BQ6UWH4 519 aa16.98■□□□□ 0.31
PDLIM2-208ENST00000416159 TRIM58Q8NG06 486 aa16.98■□□□□ 0.31
PDLIM2-208ENST00000416159 FLVCR1-AS1Q8TAF5 88 aa16.98■□□□□ 0.31
PDLIM2-208ENST00000416159 ADAMTS17Q8TE56 1095 aa16.98■□□□□ 0.31
PDLIM2-208ENST00000416159 C17orf62Q9BQA9 187 aa16.98■□□□□ 0.31
PDLIM2-208ENST00000416159 ING2Q9H160 280 aa16.98■□□□□ 0.31
PDLIM2-208ENST00000416159 HOMER3Q9NSC5 361 aa16.98■□□□□ 0.31
PDLIM2-208ENST00000416159 PLAGL1Q9UM63 463 aa16.98■□□□□ 0.31
PDLIM2-208ENST00000416159 CDYLQ9Y232 598 aa16.98■□□□□ 0.31
PDLIM2-208ENST00000416159 PCDHGA9Q9Y5G4 932 aaKnown RBP16.98■□□□□ 0.31
PDLIM2-208ENST00000416159 NBASA2RRP1 2371 aa16.97■□□□□ 0.31
PDLIM2-208ENST00000416159 C9J4A7 227 aa16.97■□□□□ 0.31
PDLIM2-208ENST00000416159 OR2B3O76000 313 aa16.97■□□□□ 0.31
PDLIM2-208ENST00000416159 GABRA4P48169 554 aa16.97■□□□□ 0.31
PDLIM2-208ENST00000416159 RAB28P51157 221 aa16.97■□□□□ 0.31
PDLIM2-208ENST00000416159 CCL11P51671 97 aa16.97■□□□□ 0.31
PDLIM2-208ENST00000416159 NCF4Q15080 339 aa16.97■□□□□ 0.31
PDLIM2-208ENST00000416159 TMED2Q15363 201 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms