RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 CRB2Q5IJ48 1285 aa13.21□□□□□ -0.29
RAPGEF1-204ENST00000414781 MED25Q71SY5 747 aa13.21□□□□□ -0.29
RAPGEF1-204ENST00000414781 DPPA4Q7L190 304 aa13.21□□□□□ -0.29
RAPGEF1-204ENST00000414781 RAVER1Q8IY67 606 aaKnown RBP13.21□□□□□ -0.29
RAPGEF1-204ENST00000414781 ZBED8Q8IZ13 594 aa13.21□□□□□ -0.29
RAPGEF1-204ENST00000414781 NXPE1Q8N323 547 aa13.21□□□□□ -0.29
RAPGEF1-204ENST00000414781 GABPB2Q8TAK5 448 aaPredicted RBP13.21□□□□□ -0.29
RAPGEF1-204ENST00000414781 BLOC1S5Q8TDH9 187 aa13.21□□□□□ -0.29
RAPGEF1-204ENST00000414781 CAVIN3Q969G5 261 aa13.21□□□□□ -0.29
RAPGEF1-204ENST00000414781 NUS1Q96E22 293 aa13.21□□□□□ -0.29
RAPGEF1-204ENST00000414781 SCARF2Q96GP6 870 aaPredicted RBP13.21□□□□□ -0.29
RAPGEF1-204ENST00000414781 SIGLEC10Q96LC7 697 aa13.21□□□□□ -0.29
RAPGEF1-204ENST00000414781 MCCC1Q96RQ3 725 aaPredicted RBP13.21□□□□□ -0.29
RAPGEF1-204ENST00000414781 EBNA1BP2Q99848 306 aaKnown RBP13.21□□□□□ -0.29
RAPGEF1-204ENST00000414781 GPR63Q9BZJ6 419 aa13.21□□□□□ -0.29
RAPGEF1-204ENST00000414781 TRIM8Q9BZR9 551 aa13.21□□□□□ -0.29
RAPGEF1-204ENST00000414781 MRM3Q9HC36 420 aaKnown RBP13.21□□□□□ -0.29
RAPGEF1-204ENST00000414781 RAD18Q9NS91 495 aa13.21□□□□□ -0.29
RAPGEF1-204ENST00000414781 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.21□□□□□ -0.29
RAPGEF1-204ENST00000414781 ZC3H7BQ9UGR2 993 aaKnown RBP13.21□□□□□ -0.29
RAPGEF1-204ENST00000414781 RIMKLBQ9ULI2 386 aa13.21□□□□□ -0.29
RAPGEF1-204ENST00000414781 FAM237BA0A1B0GVD1 139 aa13.2□□□□□ -0.3
RAPGEF1-204ENST00000414781 LILRA5A6NI73 299 aa13.2□□□□□ -0.3
RAPGEF1-204ENST00000414781 PGAM1P18669 254 aa13.2□□□□□ -0.3
RAPGEF1-204ENST00000414781 PAMP19021 973 aa13.2□□□□□ -0.3
RAPGEF1-204ENST00000414781 PHBP35232 272 aa13.2□□□□□ -0.3
RAPGEF1-204ENST00000414781 ELK3P41970 407 aa13.2□□□□□ -0.3
RAPGEF1-204ENST00000414781 RPS18P62269 152 aaKnown RBP13.2□□□□□ -0.3
RAPGEF1-204ENST00000414781 POU6F1Q14863 301 aa13.2□□□□□ -0.3
RAPGEF1-204ENST00000414781 ZDHHC20Q5W0Z9 365 aa13.2□□□□□ -0.3
RAPGEF1-204ENST00000414781 GLT6D1Q7Z4J2 308 aa13.2□□□□□ -0.3
RAPGEF1-204ENST00000414781 SLC9B2Q86UD5 537 aa13.2□□□□□ -0.3
RAPGEF1-204ENST00000414781 AENQ8WTP8 325 aaKnown RBP13.2□□□□□ -0.3
RAPGEF1-204ENST00000414781 TM9SF4Q92544 642 aa13.2□□□□□ -0.3
RAPGEF1-204ENST00000414781 RNF31Q96EP0 1072 aa13.2□□□□□ -0.3
RAPGEF1-204ENST00000414781 ELMO2Q96JJ3 720 aa13.2□□□□□ -0.3
RAPGEF1-204ENST00000414781 KIFC1Q9BW19 673 aa13.2□□□□□ -0.3
RAPGEF1-204ENST00000414781 ZFYVE1Q9HBF4 777 aa13.2□□□□□ -0.3
RAPGEF1-204ENST00000414781 SOX13Q9UN79 622 aa13.2□□□□□ -0.3
RAPGEF1-204ENST00000414781 FARSAQ9Y285 508 aaKnown RBP13.2□□□□□ -0.3
RAPGEF1-204ENST00000414781 PKP3Q9Y446 797 aa13.2□□□□□ -0.3
RAPGEF1-204ENST00000414781 TEX264Q9Y6I9 313 aa13.2□□□□□ -0.3
RAPGEF1-204ENST00000414781 PKDREJQ9NTG1 2253 aa13.2□□□□□ -0.3
RAPGEF1-204ENST00000414781 ANKRD36A6QL64 1941 aa13.19□□□□□ -0.3
RAPGEF1-204ENST00000414781 TRBV23OR9-2A0A075B6M9 112 aa13.19□□□□□ -0.3
RAPGEF1-204ENST00000414781 RGSL1A5PLK6 1076 aa13.19□□□□□ -0.3
RAPGEF1-204ENST00000414781 A6NL46 340 aa13.19□□□□□ -0.3
RAPGEF1-204ENST00000414781 STSP08842 583 aa13.19□□□□□ -0.3
RAPGEF1-204ENST00000414781 EDN3P14138 238 aa13.19□□□□□ -0.3
RAPGEF1-204ENST00000414781 DRD2P14416 443 aa13.19□□□□□ -0.3
RAPGEF1-204ENST00000414781 CTPS1P17812 591 aa13.19□□□□□ -0.3
RAPGEF1-204ENST00000414781 GM2AP17900 193 aa13.19□□□□□ -0.3
RAPGEF1-204ENST00000414781 VIPR1P32241 457 aa13.19□□□□□ -0.3
RAPGEF1-204ENST00000414781 HMGCLP35914 325 aa13.19□□□□□ -0.3
RAPGEF1-204ENST00000414781 HADHAP40939 763 aa13.19□□□□□ -0.3
RAPGEF1-204ENST00000414781 SH3BP2P78314 561 aa13.19□□□□□ -0.3
RAPGEF1-204ENST00000414781 MSLNQ13421 630 aaPredicted RBP13.19□□□□□ -0.3
RAPGEF1-204ENST00000414781 OLIG2Q13516 323 aa13.19□□□□□ -0.3
RAPGEF1-204ENST00000414781 VWA2Q5GFL6 755 aa13.19□□□□□ -0.3
RAPGEF1-204ENST00000414781 SPANXN3Q5MJ09 141 aa13.19□□□□□ -0.3
RAPGEF1-204ENST00000414781 DENND2CQ68D51 928 aa13.19□□□□□ -0.3
RAPGEF1-204ENST00000414781 IGFL3Q6UXB1 125 aa13.19□□□□□ -0.3
RAPGEF1-204ENST00000414781 BNC2Q6ZN30 1099 aaPredicted RBP13.19□□□□□ -0.3
RAPGEF1-204ENST00000414781 CYS1Q717R9 158 aa13.19□□□□□ -0.3
RAPGEF1-204ENST00000414781 BPHLQ86WA6 291 aaPredicted RBP13.19□□□□□ -0.3
RAPGEF1-204ENST00000414781 PELI3Q8N2H9 469 aa13.19□□□□□ -0.3
RAPGEF1-204ENST00000414781 CBARPQ8N350 705 aaPredicted RBP13.19□□□□□ -0.3
RAPGEF1-204ENST00000414781 FBXO36Q8NEA4 188 aa13.19□□□□□ -0.3
RAPGEF1-204ENST00000414781 ADAMTS17Q8TE56 1095 aa13.19□□□□□ -0.3
RAPGEF1-204ENST00000414781 STYXQ8WUJ0 223 aa13.19□□□□□ -0.3
RAPGEF1-204ENST00000414781 COQ10AQ96MF6 247 aa13.19□□□□□ -0.3
RAPGEF1-204ENST00000414781 PWWP2AQ96N64 755 aa13.19□□□□□ -0.3
RAPGEF1-204ENST00000414781 PDE7BQ9NP56 450 aa13.19□□□□□ -0.3
RAPGEF1-204ENST00000414781 ARFGAP3Q9NP61 516 aa13.19□□□□□ -0.3
RAPGEF1-204ENST00000414781 PIH1D1Q9NWS0 290 aaKnown RBP13.19□□□□□ -0.3
RAPGEF1-204ENST00000414781 SYBUQ9NX95 663 aa13.19□□□□□ -0.3
RAPGEF1-204ENST00000414781 ZNHIT2Q9UHR6 403 aa13.19□□□□□ -0.3
RAPGEF1-204ENST00000414781 ZNF711Q9Y462 761 aa13.19□□□□□ -0.3
RAPGEF1-204ENST00000414781 TCAF1Q9Y4C2 921 aa13.19□□□□□ -0.3
RAPGEF1-204ENST00000414781 PLEKHM1Q9Y4G2 1056 aa13.19□□□□□ -0.3
RAPGEF1-204ENST00000414781 PCDHGA10Q9Y5H3 936 aa13.19□□□□□ -0.3
RAPGEF1-204ENST00000414781 DCHS2Q6V1P9 2916 aa13.18□□□□□ -0.3
RAPGEF1-204ENST00000414781 C1orf232A0A0U1RR37 186 aa13.18□□□□□ -0.3
RAPGEF1-204ENST00000414781 MROH6A6NGR9 719 aa13.18□□□□□ -0.3
RAPGEF1-204ENST00000414781 PSMD11O00231 422 aa13.18□□□□□ -0.3
RAPGEF1-204ENST00000414781 STX7O15400 261 aaKnown RBP13.18□□□□□ -0.3
RAPGEF1-204ENST00000414781 USP1O94782 785 aa13.18□□□□□ -0.3
RAPGEF1-204ENST00000414781 NADKO95544 446 aaPredicted RBP13.18□□□□□ -0.3
RAPGEF1-204ENST00000414781 FAM153BP0C7A2 387 aa13.18□□□□□ -0.3
RAPGEF1-204ENST00000414781 MYBL2P10244 700 aa13.18□□□□□ -0.3
RAPGEF1-204ENST00000414781 POLD2P49005 469 aa13.18□□□□□ -0.3
RAPGEF1-204ENST00000414781 GFERP55789 205 aa13.18□□□□□ -0.3
RAPGEF1-204ENST00000414781 FRG1Q14331 258 aaKnown RBP13.18□□□□□ -0.3
RAPGEF1-204ENST00000414781 ZNF630Q2M218 657 aaPredicted RBP13.18□□□□□ -0.3
RAPGEF1-204ENST00000414781 FAM153CQ494X1 144 aa13.18□□□□□ -0.3
RAPGEF1-204ENST00000414781 MSS51Q4VC12 460 aa13.18□□□□□ -0.3
RAPGEF1-204ENST00000414781 C3orf62Q6ZUJ4 267 aa13.18□□□□□ -0.3
RAPGEF1-204ENST00000414781 PRSS42Q7Z5A4 293 aa13.18□□□□□ -0.3
RAPGEF1-204ENST00000414781 TMC3Q7Z5M5 1100 aa13.18□□□□□ -0.3
RAPGEF1-204ENST00000414781 ZSWIM9Q86XI8 627 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms