RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 RMND5BQ96G75 393 aaPredicted RBP12.76□□□□□ -0.37
LITAF-203ENST00000413364 LYSMD1Q96S90 227 aa12.76□□□□□ -0.37
LITAF-203ENST00000413364 ASB8Q9H765 288 aa12.76□□□□□ -0.37
LITAF-203ENST00000413364 RPF2Q9H7B2 306 aaKnown RBP12.76□□□□□ -0.37
LITAF-203ENST00000413364 WDR41Q9HAD4 459 aa12.76□□□□□ -0.37
LITAF-203ENST00000413364 SARS2Q9NP81 518 aaKnown RBP12.76□□□□□ -0.37
LITAF-203ENST00000413364 THG1LQ9NWX6 298 aaKnown RBP12.76□□□□□ -0.37
LITAF-203ENST00000413364 J3QRK9 145 aa12.76□□□□□ -0.37
LITAF-203ENST00000413364 POLR1CO15160 346 aaPredicted RBP12.76□□□□□ -0.37
LITAF-203ENST00000413364 GRM6O15303 877 aa12.76□□□□□ -0.37
LITAF-203ENST00000413364 NOL3O60936 208 aaKnown RBP12.76□□□□□ -0.37
LITAF-203ENST00000413364 SEC24DO94855 1032 aaPredicted RBP12.76□□□□□ -0.37
LITAF-203ENST00000413364 BPIP17213 487 aa12.76□□□□□ -0.37
LITAF-203ENST00000413364 CFL1P23528 166 aaKnown RBP12.76□□□□□ -0.37
LITAF-203ENST00000413364 DCKP27707 260 aa12.76□□□□□ -0.37
LITAF-203ENST00000413364 HK3P52790 923 aa12.76□□□□□ -0.37
LITAF-203ENST00000413364 FPGSQ05932 587 aa12.76□□□□□ -0.37
LITAF-203ENST00000413364 STX5Q13190 355 aa12.76□□□□□ -0.37
LITAF-203ENST00000413364 AGKQ53H12 422 aa12.76□□□□□ -0.37
LITAF-203ENST00000413364 ARHGAP15Q53QZ3 475 aa12.76□□□□□ -0.37
LITAF-203ENST00000413364 TCHHL1Q5QJ38 904 aaPredicted RBP12.76□□□□□ -0.37
LITAF-203ENST00000413364 ASTLQ6HA08 431 aaPredicted RBP12.76□□□□□ -0.37
LITAF-203ENST00000413364 ANKRD26P1Q6NSI1 321 aa12.76□□□□□ -0.37
LITAF-203ENST00000413364 ZFP1Q6P2D0 407 aa12.76□□□□□ -0.37
LITAF-203ENST00000413364 ADAMTSL2Q86TH1 951 aa12.76□□□□□ -0.37
LITAF-203ENST00000413364 IGFN1Q86VF2 1251 aa12.76□□□□□ -0.37
LITAF-203ENST00000413364 TICAM1Q8IUC6 712 aa12.76□□□□□ -0.37
LITAF-203ENST00000413364 FBXL8Q96CD0 374 aa12.76□□□□□ -0.37
LITAF-203ENST00000413364 ZNF347Q96SE7 839 aa12.76□□□□□ -0.37
LITAF-203ENST00000413364 CDRT15Q96T59 188 aa12.76□□□□□ -0.37
LITAF-203ENST00000413364 AKTIPQ9H8T0 292 aa12.76□□□□□ -0.37
LITAF-203ENST00000413364 PCDH12Q9NPG4 1184 aa12.76□□□□□ -0.37
LITAF-203ENST00000413364 DIABLOQ9NR28 239 aa12.76□□□□□ -0.37
LITAF-203ENST00000413364 PCTPQ9UKL6 214 aa12.76□□□□□ -0.37
LITAF-203ENST00000413364 GPSM3Q9Y4H4 160 aa12.76□□□□□ -0.37
LITAF-203ENST00000413364 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.75□□□□□ -0.37
LITAF-203ENST00000413364 GLYATL1P3A0A0U1RQE8 302 aa12.75□□□□□ -0.37
LITAF-203ENST00000413364 ATP6AP2A0A1C7CYW4 349 aa12.75□□□□□ -0.37
LITAF-203ENST00000413364 TAF4O00268 1085 aa12.75□□□□□ -0.37
LITAF-203ENST00000413364 PIP5K1BO14986 540 aa12.75□□□□□ -0.37
LITAF-203ENST00000413364 RFPL2O75678 378 aa12.75□□□□□ -0.37
LITAF-203ENST00000413364 ATP6AP2O75787 350 aa12.75□□□□□ -0.37
LITAF-203ENST00000413364 ATE1O95260 518 aa12.75□□□□□ -0.37
LITAF-203ENST00000413364 MLYCDO95822 493 aa12.75□□□□□ -0.37
LITAF-203ENST00000413364 RHOP08100 348 aa12.75□□□□□ -0.37
LITAF-203ENST00000413364 ENO3P13929 434 aaPredicted RBP12.75□□□□□ -0.37
LITAF-203ENST00000413364 CA5AP35218 305 aa12.75□□□□□ -0.37
LITAF-203ENST00000413364 SPAM1P38567 509 aa12.75□□□□□ -0.37
LITAF-203ENST00000413364 AGTR2P50052 363 aa12.75□□□□□ -0.37
LITAF-203ENST00000413364 PTPN5P54829 565 aa12.75□□□□□ -0.37
LITAF-203ENST00000413364 FOXA1P55317 472 aa12.75□□□□□ -0.37
LITAF-203ENST00000413364 COX10Q12887 443 aa12.75□□□□□ -0.37
LITAF-203ENST00000413364 ZNF846Q147U1 533 aa12.75□□□□□ -0.37
LITAF-203ENST00000413364 GEN1Q17RS7 908 aa12.75□□□□□ -0.37
LITAF-203ENST00000413364 EML3Q32P44 896 aa12.75□□□□□ -0.37
LITAF-203ENST00000413364 GPR33Q49SQ1 333 aa12.75□□□□□ -0.37
LITAF-203ENST00000413364 TMEM240Q5SV17 173 aa12.75□□□□□ -0.37
LITAF-203ENST00000413364 ISLR2Q6UXK2 745 aa12.75□□□□□ -0.37
LITAF-203ENST00000413364 SPPL3Q8TCT6 385 aa12.75□□□□□ -0.37
LITAF-203ENST00000413364 BADQ92934 168 aa12.75□□□□□ -0.37
LITAF-203ENST00000413364 ECHDC3Q96DC8 303 aa12.75□□□□□ -0.37
LITAF-203ENST00000413364 GIMAP5Q96F15 307 aa12.75□□□□□ -0.37
LITAF-203ENST00000413364 TXNDC15Q96J42 360 aa12.75□□□□□ -0.37
LITAF-203ENST00000413364 NPAS2Q99743 824 aa12.75□□□□□ -0.37
LITAF-203ENST00000413364 CPEB1Q9BZB8 566 aaKnown RBP12.75□□□□□ -0.37
LITAF-203ENST00000413364 SEMA4BQ9NPR2 832 aaPredicted RBP12.75□□□□□ -0.37
LITAF-203ENST00000413364 TDP1Q9NUW8 608 aa12.75□□□□□ -0.37
LITAF-203ENST00000413364 CD274Q9NZQ7 290 aa12.75□□□□□ -0.37
LITAF-203ENST00000413364 BCAP29Q9UHQ4 241 aa12.75□□□□□ -0.37
LITAF-203ENST00000413364 SLC25A13Q9UJS0 675 aa12.75□□□□□ -0.37
LITAF-203ENST00000413364 PCDHGA8Q9Y5G5 932 aa12.75□□□□□ -0.37
LITAF-203ENST00000413364 MYOCOSA0A1B0GUC4 107 aa12.74□□□□□ -0.37
LITAF-203ENST00000413364 NPIPB15A6NHN6 443 aaPredicted RBP12.74□□□□□ -0.37
LITAF-203ENST00000413364 NCF1BA6NI72 391 aaPredicted RBP12.74□□□□□ -0.37
LITAF-203ENST00000413364 NCF1CA8MVU1 366 aaPredicted RBP12.74□□□□□ -0.37
LITAF-203ENST00000413364 H3BMQ9 156 aa12.74□□□□□ -0.37
LITAF-203ENST00000413364 HOXC11O43248 304 aaPredicted RBP12.74□□□□□ -0.37
LITAF-203ENST00000413364 NCF1P14598 390 aaPredicted RBP12.74□□□□□ -0.37
LITAF-203ENST00000413364 NR4A1P22736 598 aa12.74□□□□□ -0.37
LITAF-203ENST00000413364 ACRV1P26436 265 aa12.74□□□□□ -0.37
LITAF-203ENST00000413364 GK3PQ14409 553 aa12.74□□□□□ -0.37
LITAF-203ENST00000413364 CHRNA6Q15825 494 aa12.74□□□□□ -0.37
LITAF-203ENST00000413364 PIGGQ5H8A4 983 aa12.74□□□□□ -0.37
LITAF-203ENST00000413364 C6orf52Q5T4I8 152 aa12.74□□□□□ -0.37
LITAF-203ENST00000413364 CRTC1Q6UUV9 634 aa12.74□□□□□ -0.37
LITAF-203ENST00000413364 TPRG1Q6ZUI0 275 aa12.74□□□□□ -0.37
LITAF-203ENST00000413364 TSPAN33Q86UF1 283 aa12.74□□□□□ -0.37
LITAF-203ENST00000413364 RALGPS2Q86X27 583 aaPredicted RBP12.74□□□□□ -0.37
LITAF-203ENST00000413364 CHERPQ8IWX8 916 aaKnown RBP12.74□□□□□ -0.37
LITAF-203ENST00000413364 PCDH20Q8N6Y1 951 aaKnown RBP12.74□□□□□ -0.37
LITAF-203ENST00000413364 POF1BQ8WVV4 589 aa12.74□□□□□ -0.37
LITAF-203ENST00000413364 SCRN2Q96FV2 425 aa12.74□□□□□ -0.37
LITAF-203ENST00000413364 COG8Q96MW5 612 aa12.74□□□□□ -0.37
LITAF-203ENST00000413364 KCNA7Q96RP8 456 aa12.74□□□□□ -0.37
LITAF-203ENST00000413364 BOCQ9BWV1 1114 aa12.74□□□□□ -0.37
LITAF-203ENST00000413364 BBS2Q9BXC9 721 aa12.74□□□□□ -0.37
LITAF-203ENST00000413364 TUBB1Q9H4B7 451 aa12.74□□□□□ -0.37
LITAF-203ENST00000413364 SUV39H2Q9H5I1 410 aa12.74□□□□□ -0.37
LITAF-203ENST00000413364 FBRSL1Q9HCM7 1045 aaKnown RBP12.74□□□□□ -0.37
LITAF-203ENST00000413364 TLR9Q9NR96 1032 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms