RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 TMEM26Q6ZUK4 368 aa14.81□□□□□ -0.04
LSM5-207ENST00000410044 UBE2R2Q712K3 238 aaPredicted RBP14.81□□□□□ -0.04
LSM5-207ENST00000410044 PIP4P1Q86T03 277 aa14.81□□□□□ -0.04
LSM5-207ENST00000410044 ADAMTSL2Q86TH1 951 aa14.81□□□□□ -0.04
LSM5-207ENST00000410044 DCUN1D3Q8IWE4 304 aa14.81□□□□□ -0.04
LSM5-207ENST00000410044 SPATA6LQ8N4H0 392 aa14.81□□□□□ -0.04
LSM5-207ENST00000410044 TMEM151AQ8N4L1 468 aa14.81□□□□□ -0.04
LSM5-207ENST00000410044 KYQ8NBH2 561 aa14.81□□□□□ -0.04
LSM5-207ENST00000410044 OR5AR1Q8NGP9 310 aa14.81□□□□□ -0.04
LSM5-207ENST00000410044 CFAP61Q8NHU2 1237 aa14.81□□□□□ -0.04
LSM5-207ENST00000410044 STAG3L4Q8TBR4 150 aa14.81□□□□□ -0.04
LSM5-207ENST00000410044 MCOLN3Q8TDD5 553 aa14.81□□□□□ -0.04
LSM5-207ENST00000410044 RHBDD1Q8TEB9 315 aa14.81□□□□□ -0.04
LSM5-207ENST00000410044 SKA2Q8WVK7 121 aaPredicted RBP14.81□□□□□ -0.04
LSM5-207ENST00000410044 PTERQ96BW5 349 aa14.81□□□□□ -0.04
LSM5-207ENST00000410044 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.81□□□□□ -0.04
LSM5-207ENST00000410044 ACBD3Q9H3P7 528 aa14.81□□□□□ -0.04
LSM5-207ENST00000410044 PCMTD2Q9NV79 361 aa14.81□□□□□ -0.04
LSM5-207ENST00000410044 ZNF358Q9NW07 568 aa14.81□□□□□ -0.04
LSM5-207ENST00000410044 SIRPGQ9P1W8 387 aa14.81□□□□□ -0.04
LSM5-207ENST00000410044 ADAMTS6Q9UKP5 1117 aa14.81□□□□□ -0.04
LSM5-207ENST00000410044 GRID1Q9ULK0 1009 aa14.81□□□□□ -0.04
LSM5-207ENST00000410044 PADI4Q9UM07 663 aa14.81□□□□□ -0.04
LSM5-207ENST00000410044 PDE10AQ9Y233 779 aa14.81□□□□□ -0.04
LSM5-207ENST00000410044 CFAP20Q9Y6A4 193 aaKnown RBP14.81□□□□□ -0.04
LSM5-207ENST00000410044 GOLGA4Q13439 2230 aaKnown RBP14.81□□□□□ -0.04
LSM5-207ENST00000410044 EP300Q09472 2414 aaPredicted RBP14.8□□□□□ -0.04
LSM5-207ENST00000410044 PRAMEF33A0A0G2JMD5 474 aa14.8□□□□□ -0.04
LSM5-207ENST00000410044 TARM1B6A8C7 271 aa14.8□□□□□ -0.04
LSM5-207ENST00000410044 MYO1CO00159 1063 aa14.8□□□□□ -0.04
LSM5-207ENST00000410044 BTN3A1O00481 513 aa14.8□□□□□ -0.04
LSM5-207ENST00000410044 SH3BP5O60239 455 aa14.8□□□□□ -0.04
LSM5-207ENST00000410044 GLRA3O75311 464 aa14.8□□□□□ -0.04
LSM5-207ENST00000410044 LDOC1O95751 146 aaPredicted RBP14.8□□□□□ -0.04
LSM5-207ENST00000410044 TFEBP19484 476 aa14.8□□□□□ -0.04
LSM5-207ENST00000410044 CYP2A7P20853 494 aa14.8□□□□□ -0.04
LSM5-207ENST00000410044 GPR3P46089 330 aa14.8□□□□□ -0.04
LSM5-207ENST00000410044 DUSP3P51452 185 aaPredicted RBP14.8□□□□□ -0.04
LSM5-207ENST00000410044 KPNA2P52292 529 aaKnown RBP14.8□□□□□ -0.04
LSM5-207ENST00000410044 AP1S2P56377 157 aa14.8□□□□□ -0.04
LSM5-207ENST00000410044 TSNQ15631 228 aaKnown RBP14.8□□□□□ -0.04
LSM5-207ENST00000410044 TECRLQ5HYJ1 363 aa14.8□□□□□ -0.04
LSM5-207ENST00000410044 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.8□□□□□ -0.04
LSM5-207ENST00000410044 DUS1LQ6P1R4 473 aaKnown RBP14.8□□□□□ -0.04
LSM5-207ENST00000410044 NAXDQ8IW45 347 aa14.8□□□□□ -0.04
LSM5-207ENST00000410044 TRIM48Q8IWZ4 208 aa14.8□□□□□ -0.04
LSM5-207ENST00000410044 SRRM1Q8IYB3 904 aaKnown RBP14.8□□□□□ -0.04
LSM5-207ENST00000410044 OR9A1PQ8NGU1 263 aa14.8□□□□□ -0.04
LSM5-207ENST00000410044 SMC6Q96SB8 1091 aa14.8□□□□□ -0.04
LSM5-207ENST00000410044 ATOH8Q96SQ7 321 aa14.8□□□□□ -0.04
LSM5-207ENST00000410044 MRPL57Q9BQC6 102 aaKnown RBP14.8□□□□□ -0.04
LSM5-207ENST00000410044 MENTQ9BUN1 341 aa14.8□□□□□ -0.04
LSM5-207ENST00000410044 TRIM54Q9BYV2 358 aa14.8□□□□□ -0.04
LSM5-207ENST00000410044 STN1Q9H668 368 aaKnown RBP14.8□□□□□ -0.04
LSM5-207ENST00000410044 EVA1BQ9NVM1 165 aa14.8□□□□□ -0.04
LSM5-207ENST00000410044 TMEM216Q9P0N5 145 aa14.8□□□□□ -0.04
LSM5-207ENST00000410044 LRIT1Q9P2V4 623 aa14.8□□□□□ -0.04
LSM5-207ENST00000410044 OARD1Q9Y530 152 aa14.8□□□□□ -0.04
LSM5-207ENST00000410044 PCNX2A6NKB5 2137 aa14.8□□□□□ -0.04
LSM5-207ENST00000410044 FRYLO94915 3013 aa14.79□□□□□ -0.04
LSM5-207ENST00000410044 LILRA5A6NI73 299 aa14.79□□□□□ -0.04
LSM5-207ENST00000410044 COPEO14579 308 aa14.79□□□□□ -0.04
LSM5-207ENST00000410044 TM4SF5O14894 197 aa14.79□□□□□ -0.04
LSM5-207ENST00000410044 TYROBPO43914 113 aa14.79□□□□□ -0.04
LSM5-207ENST00000410044 KDM1AO60341 852 aa14.79□□□□□ -0.04
LSM5-207ENST00000410044 KERAO60938 352 aa14.79□□□□□ -0.04
LSM5-207ENST00000410044 SYF2O95926 243 aaKnown RBP14.79□□□□□ -0.04
LSM5-207ENST00000410044 HIST1H2AGP0C0S8 130 aaPredicted RBP14.79□□□□□ -0.04
LSM5-207ENST00000410044 ERGP11308 486 aa14.79□□□□□ -0.04
LSM5-207ENST00000410044 CKMT2P17540 419 aa14.79□□□□□ -0.04
LSM5-207ENST00000410044 HIST1H2ADP20671 130 aa14.79□□□□□ -0.04
LSM5-207ENST00000410044 MAP4P27816 1152 aaKnown RBP14.79□□□□□ -0.04
LSM5-207ENST00000410044 HSD17B2P37059 387 aa14.79□□□□□ -0.04
LSM5-207ENST00000410044 EPHA4P54764 986 aa14.79□□□□□ -0.04
LSM5-207ENST00000410044 KRT33BQ14525 404 aa14.79□□□□□ -0.04
LSM5-207ENST00000410044 ARHGAP19Q14CB8 494 aa14.79□□□□□ -0.04
LSM5-207ENST00000410044 PCM1Q15154 2024 aa14.79□□□□□ -0.04
LSM5-207ENST00000410044 OR4D1Q15615 310 aa14.79□□□□□ -0.04
LSM5-207ENST00000410044 PHKG1Q16816 387 aa14.79□□□□□ -0.04
LSM5-207ENST00000410044 CCSMST1Q4G0I0 132 aa14.79□□□□□ -0.04
LSM5-207ENST00000410044 CDHR3Q6ZTQ4 885 aa14.79□□□□□ -0.04
LSM5-207ENST00000410044 C4orf33Q8N1A6 199 aa14.79□□□□□ -0.04
LSM5-207ENST00000410044 OR52E1Q8NGJ3 308 aa14.79□□□□□ -0.04
LSM5-207ENST00000410044 HMGCLL1Q8TB92 370 aa14.79□□□□□ -0.04
LSM5-207ENST00000410044 SETD7Q8WTS6 366 aaKnown RBP14.79□□□□□ -0.04
LSM5-207ENST00000410044 NAT6Q93015 286 aa14.79□□□□□ -0.04
LSM5-207ENST00000410044 ARL8AQ96BM9 186 aa14.79□□□□□ -0.04
LSM5-207ENST00000410044 APOPT1Q96IL0 206 aa14.79□□□□□ -0.04
LSM5-207ENST00000410044 HIST1H2AHQ96KK5 128 aa14.79□□□□□ -0.04
LSM5-207ENST00000410044 CCDC138Q96M89 665 aa14.79□□□□□ -0.04
LSM5-207ENST00000410044 TSNARE1Q96NA8 513 aa14.79□□□□□ -0.04
LSM5-207ENST00000410044 CDC6Q99741 560 aa14.79□□□□□ -0.04
LSM5-207ENST00000410044 HIST1H2AJQ99878 128 aa14.79□□□□□ -0.04
LSM5-207ENST00000410044 H2AFJQ9BTM1 129 aa14.79□□□□□ -0.04
LSM5-207ENST00000410044 CENPHQ9H3R5 247 aa14.79□□□□□ -0.04
LSM5-207ENST00000410044 SPATA7Q9P0W8 599 aa14.79□□□□□ -0.04
LSM5-207ENST00000410044 TSR3Q9UJK0 312 aaKnown RBP14.79□□□□□ -0.04
LSM5-207ENST00000410044 RNF215Q9Y6U7 377 aa14.79□□□□□ -0.04
LSM5-207ENST00000410044 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.78□□□□□ -0.04
LSM5-207ENST00000410044 FAM221BA6H8Z2 402 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms