RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 FBXO32Q969P5 355 aa6.18□□□□□ -1.42
LSM5-203ENST00000409782 EXOC4Q96A65 974 aa6.18□□□□□ -1.42
LSM5-203ENST00000409782 MYEOVQ96EZ4 313 aa6.18□□□□□ -1.42
LSM5-203ENST00000409782 ZNF845Q96IR2 970 aaPredicted RBP6.18□□□□□ -1.42
LSM5-203ENST00000409782 KLHL15Q96M94 604 aa6.18□□□□□ -1.42
LSM5-203ENST00000409782 CMTM3Q96MX0 182 aa6.18□□□□□ -1.42
LSM5-203ENST00000409782 LRRC3BQ96PB8 259 aa6.18□□□□□ -1.42
LSM5-203ENST00000409782 THAP7Q9BT49 309 aaPredicted RBP6.18□□□□□ -1.42
LSM5-203ENST00000409782 MED10Q9BTT4 135 aa6.18□□□□□ -1.42
LSM5-203ENST00000409782 TRIM31Q9BZY9 425 aa6.18□□□□□ -1.42
LSM5-203ENST00000409782 MMRN2Q9H8L6 949 aa6.18□□□□□ -1.42
LSM5-203ENST00000409782 ZWILCHQ9H900 591 aa6.18□□□□□ -1.42
LSM5-203ENST00000409782 SCPEP1Q9HB40 452 aa6.18□□□□□ -1.42
LSM5-203ENST00000409782 CSNK1G1Q9HCP0 422 aa6.18□□□□□ -1.42
LSM5-203ENST00000409782 HPS4Q9NQG7 708 aa6.18□□□□□ -1.42
LSM5-203ENST00000409782 SLC35C2Q9NQQ7 365 aa6.18□□□□□ -1.42
LSM5-203ENST00000409782 CCDC177Q9NQR7 707 aaPredicted RBP6.18□□□□□ -1.42
LSM5-203ENST00000409782 FAM49BQ9NUQ9 324 aa6.18□□□□□ -1.42
LSM5-203ENST00000409782 GIMAP4Q9NUV9 329 aa6.18□□□□□ -1.42
LSM5-203ENST00000409782 TMEM30AQ9NV96 361 aa6.18□□□□□ -1.42
LSM5-203ENST00000409782 TBCCD1Q9NVR7 557 aa6.18□□□□□ -1.42
LSM5-203ENST00000409782 IL37Q9NZH6 218 aa6.18□□□□□ -1.42
LSM5-203ENST00000409782 IL1RAPL1Q9NZN1 696 aa6.18□□□□□ -1.42
LSM5-203ENST00000409782 GCNT4Q9P109 453 aa6.18□□□□□ -1.42
LSM5-203ENST00000409782 ARMCX3Q9UH62 379 aaPredicted RBP6.18□□□□□ -1.42
LSM5-203ENST00000409782 FBXO4Q9UKT5 387 aa6.18□□□□□ -1.42
LSM5-203ENST00000409782 NDRG2Q9UN36 371 aaKnown RBP6.18□□□□□ -1.42
LSM5-203ENST00000409782 CCL26Q9Y258 94 aa6.18□□□□□ -1.42
LSM5-203ENST00000409782 MTF2Q9Y483 593 aaPredicted RBP6.18□□□□□ -1.42
LSM5-203ENST00000409782 CLDN16Q9Y5I7 305 aa6.18□□□□□ -1.42
LSM5-203ENST00000409782 HELZP42694 1942 aaKnown RBP6.18□□□□□ -1.42
LSM5-203ENST00000409782 ANAPC1Q9H1A4 1944 aa6.18□□□□□ -1.42
LSM5-203ENST00000409782 ZNF638Q14966 1978 aaKnown RBP6.17□□□□□ -1.42
LSM5-203ENST00000409782 FANCMQ8IYD8 2048 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 A0A1W2PQ09 198 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 A0A1W2PQF6 199 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 TRIM49BA6NDI0 452 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 TMEM247A6NEH6 219 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 GLOD5A6NK44 160 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 CES2O00748 559 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 SCAMP1O15126 338 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 PAPSS2O95340 614 aaPredicted RBP6.17□□□□□ -1.42
LSM5-203ENST00000409782 NFATC1O95644 943 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 GNA14O95837 355 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 OAS1P00973 400 aaKnown RBP6.17□□□□□ -1.42
LSM5-203ENST00000409782 SP9P0CG40 484 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 CHRNB1P11230 501 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 PEPDP12955 493 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 CCDC130P13994 396 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 CD58P19256 250 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 CD72P21854 359 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 YWHAQP27348 245 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 EEF1DP29692 281 aaKnown RBP6.17□□□□□ -1.42
LSM5-203ENST00000409782 DPP6P42658 865 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 IFNAR2P48551 515 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 CLK3P49761 638 aaKnown RBP6.17□□□□□ -1.42
LSM5-203ENST00000409782 CCR3P51677 355 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 ADPRHP54922 357 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 SLC37A1P57057 533 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 YWHAEP62258 255 aaKnown RBP6.17□□□□□ -1.42
LSM5-203ENST00000409782 CFHR3Q02985 330 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 LRMPQ12912 555 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 TAF10Q12962 218 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 CSTF3Q12996 717 aaKnown RBP6.17□□□□□ -1.42
LSM5-203ENST00000409782 RUNX3Q13761 415 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 IRF3Q14653 427 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 CBWD6Q4V339 395 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 CBWD3Q5JTY5 395 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 UBAP2Q5T6F2 1119 aaKnown RBP6.17□□□□□ -1.42
LSM5-203ENST00000409782 KIAA0895LQ68EN5 471 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 NAPEPLDQ6IQ20 393 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 KLHL10Q6JEL2 608 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 MTFR2Q6P444 385 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 PAQR9Q6ZVX9 377 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 GGNQ86UU5 652 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 SCML4Q8N228 414 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 ARL14EPQ8N8R7 260 aaPredicted RBP6.17□□□□□ -1.42
LSM5-203ENST00000409782 KCTD6Q8NC69 237 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 CADM4Q8NFZ8 388 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 NELFBQ8WX92 580 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 SEMA4DQ92854 862 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 EXTL1Q92935 676 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 RFKQ969G6 155 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 SLC35C1Q96A29 364 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 EEF2KMTQ96G04 330 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 VMP1Q96GC9 406 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 ZFYVE19Q96K21 471 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 HNRNPABQ99729 332 aaKnown RBP6.17□□□□□ -1.42
LSM5-203ENST00000409782 FBXO44Q9H4M3 255 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 CISHQ9NSE2 258 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 RAB20Q9NX57 234 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 GTSE1Q9NYZ3 720 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 MRPL15Q9P015 296 aaKnown RBP6.17□□□□□ -1.42
LSM5-203ENST00000409782 PEMTQ9UBM1 199 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 COQ4Q9Y3A0 265 aa6.17□□□□□ -1.42
LSM5-203ENST00000409782 FAM237BA0A1B0GVD1 139 aa6.16□□□□□ -1.42
LSM5-203ENST00000409782 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.16□□□□□ -1.42
LSM5-203ENST00000409782 PRR23AA6NEV1 266 aa6.16□□□□□ -1.42
LSM5-203ENST00000409782 MCIDASD6RGH6 385 aa6.16□□□□□ -1.42
LSM5-203ENST00000409782 SLC9A3R1O14745 358 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms