RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 ADAMDEC1O15204 470 aa3.65□□□□□ -1.83
PMS1-203ENST00000409593 ZNF500O60304 480 aaPredicted RBP3.65□□□□□ -1.83
PMS1-203ENST00000409593 TSPAN1O60635 241 aa3.65□□□□□ -1.83
PMS1-203ENST00000409593 AP2A2O94973 939 aa3.65□□□□□ -1.83
PMS1-203ENST00000409593 PORP16435 677 aaPredicted RBP3.65□□□□□ -1.83
PMS1-203ENST00000409593 DNASE1P24855 282 aa3.65□□□□□ -1.83
PMS1-203ENST00000409593 EIF2DP41214 584 aaKnown RBP3.65□□□□□ -1.83
PMS1-203ENST00000409593 MAGEA11P43364 429 aa3.65□□□□□ -1.83
PMS1-203ENST00000409593 SLC6A12P48065 614 aa3.65□□□□□ -1.83
PMS1-203ENST00000409593 NTRK2Q16620 822 aa3.65□□□□□ -1.83
PMS1-203ENST00000409593 C15orf59Q2T9L4 293 aaPredicted RBP3.65□□□□□ -1.83
PMS1-203ENST00000409593 HYIQ5T013 277 aa3.65□□□□□ -1.83
PMS1-203ENST00000409593 STXBP4Q6ZWJ1 553 aa3.65□□□□□ -1.83
PMS1-203ENST00000409593 CEP57L1Q8IYX8 460 aa3.65□□□□□ -1.83
PMS1-203ENST00000409593 SCML4Q8N228 414 aa3.65□□□□□ -1.83
PMS1-203ENST00000409593 ARHGAP24Q8N264 748 aa3.65□□□□□ -1.83
PMS1-203ENST00000409593 OR4C3Q8NH37 302 aa3.65□□□□□ -1.83
PMS1-203ENST00000409593 FGFBP3Q8TAT2 258 aa3.65□□□□□ -1.83
PMS1-203ENST00000409593 PTPMT1Q8WUK0 201 aaPredicted RBP3.65□□□□□ -1.83
PMS1-203ENST00000409593 MAGED4Q96JG8 741 aa3.65□□□□□ -1.83
PMS1-203ENST00000409593 OLFM1Q99784 485 aa3.65□□□□□ -1.83
PMS1-203ENST00000409593 TUBE1Q9UJT0 475 aa3.65□□□□□ -1.83
PMS1-203ENST00000409593 RSF1Q96T23 1441 aaPredicted RBP3.64□□□□□ -1.83
PMS1-203ENST00000409593 GPR75-ASB3A0A0A6YYF3 556 aa3.64□□□□□ -1.83
PMS1-203ENST00000409593 NDUFAF8A1L188 74 aa3.64□□□□□ -1.83
PMS1-203ENST00000409593 SLCO1B7G3V0H7 640 aa3.64□□□□□ -1.83
PMS1-203ENST00000409593 MEIS2O14770 477 aa3.64□□□□□ -1.83
PMS1-203ENST00000409593 EXTL3O43909 919 aa3.64□□□□□ -1.83
PMS1-203ENST00000409593 ENTPD3O75355 529 aa3.64□□□□□ -1.83
PMS1-203ENST00000409593 SLC6A6P31641 620 aa3.64□□□□□ -1.83
PMS1-203ENST00000409593 TAF6P49848 677 aa3.64□□□□□ -1.83
PMS1-203ENST00000409593 LUMP51884 338 aaPredicted RBP3.64□□□□□ -1.83
PMS1-203ENST00000409593 PPARDQ03181 441 aa3.64□□□□□ -1.83
PMS1-203ENST00000409593 GRAPQ13588 217 aa3.64□□□□□ -1.83
PMS1-203ENST00000409593 PCLAFQ15004 111 aa3.64□□□□□ -1.83
PMS1-203ENST00000409593 PHLDA2Q53GA4 152 aa3.64□□□□□ -1.83
PMS1-203ENST00000409593 ELFN2Q5R3F8 820 aa3.64□□□□□ -1.83
PMS1-203ENST00000409593 PIGZQ86VD9 579 aa3.64□□□□□ -1.83
PMS1-203ENST00000409593 GUF1Q8N442 669 aaKnown RBP3.64□□□□□ -1.83
PMS1-203ENST00000409593 RAB42Q8N4Z0 105 aa3.64□□□□□ -1.83
PMS1-203ENST00000409593 ZNF611Q8N823 705 aa3.64□□□□□ -1.83
PMS1-203ENST00000409593 HPSE2Q8WWQ2 592 aa3.64□□□□□ -1.83
PMS1-203ENST00000409593 IRGQQ8WZA9 623 aa3.64□□□□□ -1.83
PMS1-203ENST00000409593 LINC00479Q96M42 142 aa3.64□□□□□ -1.83
PMS1-203ENST00000409593 BTBD10Q9BSF8 475 aa3.64□□□□□ -1.83
PMS1-203ENST00000409593 P2RY12Q9H244 342 aa3.64□□□□□ -1.83
PMS1-203ENST00000409593 ERVMER34-1Q9H9K5 563 aa3.64□□□□□ -1.83
PMS1-203ENST00000409593 ZDHHC18Q9NUE0 388 aa3.64□□□□□ -1.83
PMS1-203ENST00000409593 GIMAP4Q9NUV9 329 aa3.64□□□□□ -1.83
PMS1-203ENST00000409593 BARHL2Q9NY43 387 aa3.64□□□□□ -1.83
PMS1-203ENST00000409593 MRPL15Q9P015 296 aaKnown RBP3.64□□□□□ -1.83
PMS1-203ENST00000409593 TMEM5Q9Y2B1 443 aa3.64□□□□□ -1.83
PMS1-203ENST00000409593 IPO8O15397 1037 aaKnown RBP3.63□□□□□ -1.83
PMS1-203ENST00000409593 OR2T7P0C7T2 308 aa3.63□□□□□ -1.83
PMS1-203ENST00000409593 EIF5P55010 431 aaKnown RBP3.63□□□□□ -1.83
PMS1-203ENST00000409593 B3GALT5-AS1P59052 145 aa3.63□□□□□ -1.83
PMS1-203ENST00000409593 ADIPOR2Q86V24 386 aa3.63□□□□□ -1.83
PMS1-203ENST00000409593 MYPOPQ86VE0 399 aaPredicted RBP3.63□□□□□ -1.83
PMS1-203ENST00000409593 TMEM139Q8IV31 216 aa3.63□□□□□ -1.83
PMS1-203ENST00000409593 MAPKAPK5-AS1Q8N8E1 139 aa3.63□□□□□ -1.83
PMS1-203ENST00000409593 CCDC107Q8WV48 283 aa3.63□□□□□ -1.83
PMS1-203ENST00000409593 SLC22A18Q96BI1 424 aa3.63□□□□□ -1.83
PMS1-203ENST00000409593 RSRC1Q96IZ7 334 aaKnown RBP3.63□□□□□ -1.83
PMS1-203ENST00000409593 MS4A10Q96PG2 267 aa3.63□□□□□ -1.83
PMS1-203ENST00000409593 URM1Q9BTM9 101 aaKnown RBP3.63□□□□□ -1.83
PMS1-203ENST00000409593 SDR39U1Q9NRG7 319 aaPredicted RBP3.63□□□□□ -1.83
PMS1-203ENST00000409593 TMEM181Q9P2C4 612 aa3.63□□□□□ -1.83
PMS1-203ENST00000409593 B3GAT1Q9P2W7 334 aa3.63□□□□□ -1.83
PMS1-203ENST00000409593 EXOGQ9Y2C4 368 aaKnown RBP3.63□□□□□ -1.83
PMS1-203ENST00000409593 ANKRD61A6NGH8 418 aa3.62□□□□□ -1.83
PMS1-203ENST00000409593 OR10H2O60403 315 aa3.62□□□□□ -1.83
PMS1-203ENST00000409593 WDPCPO95876 746 aa3.62□□□□□ -1.83
PMS1-203ENST00000409593 ACTN2P35609 894 aa3.62□□□□□ -1.83
PMS1-203ENST00000409593 SLC9A3P48764 834 aa3.62□□□□□ -1.83
PMS1-203ENST00000409593 CDH13P55290 713 aa3.62□□□□□ -1.83
PMS1-203ENST00000409593 PRPF31Q8WWY3 499 aaKnown RBP3.62□□□□□ -1.83
PMS1-203ENST00000409593 ZNF622Q969S3 477 aaKnown RBP eCLIP3.62□□□□□ -1.83
PMS1-203ENST00000409593 POM121L2Q96KW2 1035 aa3.62□□□□□ -1.83
PMS1-203ENST00000409593 PDE7BQ9NP56 450 aa3.62□□□□□ -1.83
PMS1-203ENST00000409593 DPP3Q9NY33 737 aa3.62□□□□□ -1.83
PMS1-203ENST00000409593 DAPK2Q9UIK4 370 aa3.62□□□□□ -1.83
PMS1-203ENST00000409593 WBP11Q9Y2W2 641 aaKnown RBP3.62□□□□□ -1.83
PMS1-203ENST00000409593 A0A0J9YWU9 116 aa3.62□□□□□ -1.83
PMS1-203ENST00000409593 KLF11O14901 512 aa3.62□□□□□ -1.83
PMS1-203ENST00000409593 RNASEH1O60930 286 aaKnown RBP3.62□□□□□ -1.83
PMS1-203ENST00000409593 GFPT2O94808 682 aa3.62□□□□□ -1.83
PMS1-203ENST00000409593 DPEP1P16444 411 aa3.62□□□□□ -1.83
PMS1-203ENST00000409593 CEBPBP17676 345 aa3.62□□□□□ -1.83
PMS1-203ENST00000409593 TYMPP19971 482 aa3.62□□□□□ -1.83
PMS1-203ENST00000409593 CA6P23280 308 aa3.62□□□□□ -1.83
PMS1-203ENST00000409593 PTPN3P26045 913 aa3.62□□□□□ -1.83
PMS1-203ENST00000409593 STK4Q13043 487 aa3.62□□□□□ -1.83
PMS1-203ENST00000409593 TEAD2Q15562 447 aa3.62□□□□□ -1.83
PMS1-203ENST00000409593 ITPRIPL2Q3MIP1 535 aa3.62□□□□□ -1.83
PMS1-203ENST00000409593 MINDY1Q8N5J2 469 aa3.62□□□□□ -1.83
PMS1-203ENST00000409593 NPEPL1Q8NDH3 523 aa3.62□□□□□ -1.83
PMS1-203ENST00000409593 OR11H4Q8NGC9 324 aa3.62□□□□□ -1.83
PMS1-203ENST00000409593 EXD1Q8NHP7 514 aa3.62□□□□□ -1.83
PMS1-203ENST00000409593 TAF15Q92804 592 aaKnown RBP eCLIP3.62□□□□□ -1.83
PMS1-203ENST00000409593 ZNF689Q96CS4 500 aaPredicted RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms