RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 MN1Q10571 1320 aaPredicted RBP12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 SHANK1Q9Y566 2161 aa12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 A0A0J9YYE9 177 aa12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 FADS2P1A8MWK0 482 aa12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 DCTN3O75935 186 aa12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 AGFG2O95081 481 aa12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 CLDN7O95471 211 aa12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 METTL18O95568 372 aa12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 TRBC1P01850 177 aa12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 C9P02748 559 aa12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 APRTP07741 180 aa12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 SNRPAP09012 282 aaKnown RBP12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 NQO1P15559 274 aaKnown RBP12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 ADRA1DP25100 572 aa12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 ALDH3A1P30838 453 aa12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 CCNFP41002 786 aa12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 LEPRP48357 1165 aaKnown RBP12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 SEPHS1P49903 392 aa12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 STC1P52823 247 aa12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 EPHA4P54764 986 aa12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 SARNPP82979 210 aaKnown RBP12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 SETDB1Q15047 1291 aa12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 PRKD1Q15139 912 aaPredicted RBP12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 SNCBQ16143 134 aa12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 ZNF648Q5T619 568 aaPredicted RBP12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 STEAP4Q687X5 459 aa12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 ZNF534Q76KX8 674 aa12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 ZNF765Q7L2R6 523 aa12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 SLC9B2Q86UD5 537 aa12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 LRRC6Q86X45 466 aa12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 C10orf82Q8WW14 230 aa12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 MTBPQ96DY7 904 aa12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 SIGLEC10Q96LC7 697 aa12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 SPATA13Q96N96 652 aa12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 OR6C1Q96RD1 312 aa12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 FERMT1Q9BQL6 677 aa12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 PLAC1Q9HBJ0 212 aa12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 NT5MQ9NPB1 228 aa12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 TXLNGQ9NUQ3 528 aa12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 CPNE7Q9UBL6 633 aa12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 PCDHB3Q9Y5E6 796 aa12.44□□□□□ -0.42
CHRNA1-205ENST00000409542 CELSR2Q9HCU4 2923 aa12.43□□□□□ -0.42
CHRNA1-205ENST00000409542 CRYBG3Q68DQ2 2970 aa12.43□□□□□ -0.42
CHRNA1-205ENST00000409542 FAM159BA6NKW6 160 aa12.43□□□□□ -0.42
CHRNA1-205ENST00000409542 CHUKO15111 745 aa12.43□□□□□ -0.42
CHRNA1-205ENST00000409542 KIF1CO43896 1103 aaKnown RBP12.43□□□□□ -0.42
CHRNA1-205ENST00000409542 AVILO75366 819 aa12.43□□□□□ -0.42
CHRNA1-205ENST00000409542 RFPL1O75677 317 aa12.43□□□□□ -0.42
CHRNA1-205ENST00000409542 STK10O94804 968 aaKnown RBP12.43□□□□□ -0.42
CHRNA1-205ENST00000409542 PRLP01236 227 aa12.43□□□□□ -0.42
CHRNA1-205ENST00000409542 ANKRD34CP0C6C1 535 aa12.43□□□□□ -0.42
CHRNA1-205ENST00000409542 TYRP1P17643 537 aa12.43□□□□□ -0.42
CHRNA1-205ENST00000409542 ETV4P43268 484 aa12.43□□□□□ -0.42
CHRNA1-205ENST00000409542 SERPINB9P50453 376 aa12.43□□□□□ -0.42
CHRNA1-205ENST00000409542 UBE2IP63279 158 aaKnown RBP12.43□□□□□ -0.42
CHRNA1-205ENST00000409542 PAFAH1B3Q15102 231 aaKnown RBP12.43□□□□□ -0.42
CHRNA1-205ENST00000409542 NADK2Q4G0N4 442 aa12.43□□□□□ -0.42
CHRNA1-205ENST00000409542 FHL5Q5TD97 284 aa12.43□□□□□ -0.42
CHRNA1-205ENST00000409542 ICE2Q659A1 982 aa12.43□□□□□ -0.42
CHRNA1-205ENST00000409542 UNC5AQ6ZN44 842 aa12.43□□□□□ -0.42
CHRNA1-205ENST00000409542 ASRGL1Q7L266 308 aa12.43□□□□□ -0.42
CHRNA1-205ENST00000409542 OTOAQ7RTW8 1153 aa12.43□□□□□ -0.42
CHRNA1-205ENST00000409542 GSDMBQ8TAX9 411 aa12.43□□□□□ -0.42
CHRNA1-205ENST00000409542 SH3KBP1Q96B97 665 aa12.43□□□□□ -0.42
CHRNA1-205ENST00000409542 PLEKHG4BQ96PX9 1271 aa12.43□□□□□ -0.42
CHRNA1-205ENST00000409542 SLCO1B3Q9NPD5 702 aa12.43□□□□□ -0.42
CHRNA1-205ENST00000409542 POLHQ9Y253 713 aa12.43□□□□□ -0.42
CHRNA1-205ENST00000409542 CHKBQ9Y259 395 aa12.43□□□□□ -0.42
CHRNA1-205ENST00000409542 A1L4Q6 167 aa12.42□□□□□ -0.42
CHRNA1-205ENST00000409542 TTLL8A6PVC2 850 aa12.42□□□□□ -0.42
CHRNA1-205ENST00000409542 TRIM49D1C9J1S8 452 aa12.42□□□□□ -0.42
CHRNA1-205ENST00000409542 KLF11O14901 512 aa12.42□□□□□ -0.42
CHRNA1-205ENST00000409542 VPS4BO75351 444 aa12.42□□□□□ -0.42
CHRNA1-205ENST00000409542 CREG1O75629 220 aa12.42□□□□□ -0.42
CHRNA1-205ENST00000409542 TIAF1O95411 115 aa12.42□□□□□ -0.42
CHRNA1-205ENST00000409542 TROVE2P10155 538 aaKnown RBP eCLIP12.42□□□□□ -0.42
CHRNA1-205ENST00000409542 F3P13726 295 aa12.42□□□□□ -0.42
CHRNA1-205ENST00000409542 COL8A1P27658 744 aa12.42□□□□□ -0.42
CHRNA1-205ENST00000409542 DSC2Q02487 901 aa12.42□□□□□ -0.42
CHRNA1-205ENST00000409542 PDK1Q15118 436 aa12.42□□□□□ -0.42
CHRNA1-205ENST00000409542 ANKRD20A2Q5SQ80 823 aa12.42□□□□□ -0.42
CHRNA1-205ENST00000409542 FAM182AQ5T1J6 154 aa12.42□□□□□ -0.42
CHRNA1-205ENST00000409542 SWT1Q5T5J6 900 aaKnown RBP12.42□□□□□ -0.42
CHRNA1-205ENST00000409542 ANKRD20A1Q5TYW2 823 aa12.42□□□□□ -0.42
CHRNA1-205ENST00000409542 MARC1Q5VT66 337 aa12.42□□□□□ -0.42
CHRNA1-205ENST00000409542 ANKRD20A3Q5VUR7 823 aa12.42□□□□□ -0.42
CHRNA1-205ENST00000409542 LYSMD3Q7Z3D4 306 aa12.42□□□□□ -0.42
CHRNA1-205ENST00000409542 PLXDC1Q8IUK5 500 aa12.42□□□□□ -0.42
CHRNA1-205ENST00000409542 TEX26Q8N6G2 289 aa12.42□□□□□ -0.42
CHRNA1-205ENST00000409542 PPM1NQ8N819 430 aa12.42□□□□□ -0.42
CHRNA1-205ENST00000409542 CPT1CQ8TCG5 803 aa12.42□□□□□ -0.42
CHRNA1-205ENST00000409542 SSC4DQ8WTU2 575 aa12.42□□□□□ -0.42
CHRNA1-205ENST00000409542 CT55Q8WUE5 264 aa12.42□□□□□ -0.42
CHRNA1-205ENST00000409542 LRRN4Q8WUT4 740 aa12.42□□□□□ -0.42
CHRNA1-205ENST00000409542 TGM7Q96PF1 710 aa12.42□□□□□ -0.42
CHRNA1-205ENST00000409542 TWSG1Q9GZX9 223 aa12.42□□□□□ -0.42
CHRNA1-205ENST00000409542 MANSC1Q9H8J5 431 aa12.42□□□□□ -0.42
CHRNA1-205ENST00000409542 ZNF624Q9P2J8 865 aaPredicted RBP12.42□□□□□ -0.42
CHRNA1-205ENST00000409542 SLC17A7Q9P2U7 560 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms