RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 TRDMT1O14717 391 aaKnown RBP5.38□□□□□ -1.55
CLK1-202ENST00000409403 POLR1CO15160 346 aaPredicted RBP5.38□□□□□ -1.55
CLK1-202ENST00000409403 GPR42O15529 346 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 TADA2AO75478 443 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 DAB1O75553 588 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 PROSCO94903 275 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 PTTG1O95997 202 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 SERPINE1P05121 402 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 GRPP07492 148 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 IL4RP24394 825 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 CD40LGP29965 261 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 RCVRNP35243 200 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 PTGS2P35354 604 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 LEPRP48357 1165 aaKnown RBP5.38□□□□□ -1.55
CLK1-202ENST00000409403 NUDT2P50583 147 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 HLCSP50747 726 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 MFAP3P55082 362 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 MRPS15P82914 257 aaKnown RBP5.38□□□□□ -1.55
CLK1-202ENST00000409403 PPP2R2BQ00005 443 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 BFSP1Q12934 665 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 CTBP1Q13363 440 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 NAB1Q13506 487 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 GK3PQ14409 553 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 DLG2Q15700 870 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 PIGGQ5H8A4 983 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 CRB2Q5IJ48 1285 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 INTS11Q5TA45 600 aaKnown RBP5.38□□□□□ -1.55
CLK1-202ENST00000409403 RINT1Q6NUQ1 792 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 FAM122CQ6P4D5 195 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.38□□□□□ -1.55
CLK1-202ENST00000409403 ZBTB49Q6ZSB9 765 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 LCNL1Q6ZST4 164 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 KIAA0408Q6ZU52 694 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 TMEM26Q6ZUK4 368 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 DENND5BQ6ZUT9 1274 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 TFAP2DQ7Z6R9 452 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 CDR2LQ86X02 465 aaPredicted RBP5.38□□□□□ -1.55
CLK1-202ENST00000409403 ZNF677Q86XU0 584 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 C12orf56Q8IXR9 622 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 ELMOD2Q8IZ81 293 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 CLYBLQ8N0X4 340 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 ZCCHC7Q8N3Z6 543 aaKnown RBP5.38□□□□□ -1.55
CLK1-202ENST00000409403 LEMD2Q8NC56 503 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 OR13F1Q8NGS4 319 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 RP9Q8TA86 221 aaKnown RBP5.38□□□□□ -1.55
CLK1-202ENST00000409403 TFB1MQ8WVM0 346 aaKnown RBP5.38□□□□□ -1.55
CLK1-202ENST00000409403 SEPT8Q92599 483 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 KIAA1191Q96A73 305 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 VPS33AQ96AX1 596 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 ASB9Q96DX5 294 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 SH3YL1Q96HL8 342 aaPredicted RBP5.38□□□□□ -1.55
CLK1-202ENST00000409403 EGLN2Q96KS0 407 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 GON7Q9BXV9 100 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 TMEM39BQ9GZU3 492 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 TRPV6Q9H1D0 765 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 ZCCHC4Q9H5U6 513 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 PTPRHQ9HD43 1115 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 AKIP1Q9NQ31 210 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 GIMAP4Q9NUV9 329 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 FBXO28Q9NVF7 368 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 PCSK1NQ9UHG2 260 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 VPS51Q9UID3 782 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 ENPP5Q9UJA9 477 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 ZNF221Q9UK13 617 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 HEMK1Q9Y5R4 338 aaPredicted RBP5.38□□□□□ -1.55
CLK1-202ENST00000409403 LOC285556D6RIA3 1793 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 TENM4Q6N022 2769 aa5.38□□□□□ -1.55
CLK1-202ENST00000409403 A0A0B4J269 797 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 ERVV-1B6SEH8 477 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 E5RJQ4 531 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 F5H423 210 aaPredicted RBP5.37□□□□□ -1.55
CLK1-202ENST00000409403 M0QYG6 137 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 APOL1O14791 398 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 BET1O15155 118 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 HOXC11O43248 304 aaPredicted RBP5.37□□□□□ -1.55
CLK1-202ENST00000409403 SNX2O60749 519 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 GLRA3O75311 464 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 RFPL2O75678 378 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 FGF18O76093 207 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 GCNT3O95395 438 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 FCGR1AP12314 374 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 CDH1P12830 882 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 NCF2P19878 526 aaPredicted RBP5.37□□□□□ -1.55
CLK1-202ENST00000409403 BTDP43251 543 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 GABRB2P47870 512 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 PSMD8P48556 350 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 SLC11A2P49281 568 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 CLK3P49761 638 aaKnown RBP5.37□□□□□ -1.55
CLK1-202ENST00000409403 AP2S1P53680 142 aaPredicted RBP5.37□□□□□ -1.55
CLK1-202ENST00000409403 SLC12A3P55017 1021 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 MAP3K7CLP57077 242 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 EIF3EP60228 445 aaKnown RBP5.37□□□□□ -1.55
CLK1-202ENST00000409403 SRP54P61011 504 aaKnown RBP5.37□□□□□ -1.55
CLK1-202ENST00000409403 GNA12Q03113 381 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 FOXD4Q12950 439 aaPredicted RBP5.37□□□□□ -1.55
CLK1-202ENST00000409403 KLF10Q13118 480 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 ART3Q13508 389 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 TUBB3Q13509 450 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 SLC12A1Q13621 1099 aa5.37□□□□□ -1.55
CLK1-202ENST00000409403 FASTKD3Q14CZ7 662 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms