RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 RPUSD3Q6P087 351 aaKnown RBP16.06■□□□□ 0.16
CHMP3-203ENST00000409225 TLDC1Q6P9B6 456 aa16.06■□□□□ 0.16
CHMP3-203ENST00000409225 SHISA6Q6ZSJ9 500 aa16.06■□□□□ 0.16
CHMP3-203ENST00000409225 ZNF295-AS1Q8N0V1 137 aa16.06■□□□□ 0.16
CHMP3-203ENST00000409225 MRGPRX2Q96LB1 330 aa16.06■□□□□ 0.16
CHMP3-203ENST00000409225 MAK16Q9BXY0 300 aaKnown RBP16.06■□□□□ 0.16
CHMP3-203ENST00000409225 OR52A5Q9H2C5 316 aa16.06■□□□□ 0.16
CHMP3-203ENST00000409225 MVB12BQ9H7P6 319 aa16.06■□□□□ 0.16
CHMP3-203ENST00000409225 CTTNBP2NLQ9P2B4 639 aa16.06■□□□□ 0.16
CHMP3-203ENST00000409225 SH3BGRL2Q9UJC5 107 aa16.06■□□□□ 0.16
CHMP3-203ENST00000409225 TACC2O95359 2948 aa16.06■□□□□ 0.16
CHMP3-203ENST00000409225 PDHA2P29803 388 aa16.05■□□□□ 0.16
CHMP3-203ENST00000409225 PRLHRP49683 370 aa16.05■□□□□ 0.16
CHMP3-203ENST00000409225 DYNLT1P63172 113 aa16.05■□□□□ 0.16
CHMP3-203ENST00000409225 MFAP5Q13361 173 aa16.05■□□□□ 0.16
CHMP3-203ENST00000409225 TESK1Q15569 626 aa16.05■□□□□ 0.16
CHMP3-203ENST00000409225 SLC1A5Q15758 541 aa16.05■□□□□ 0.16
CHMP3-203ENST00000409225 KIRREL2Q6UWL6 708 aa16.05■□□□□ 0.16
CHMP3-203ENST00000409225 ISLR2Q6UXK2 745 aa16.05■□□□□ 0.16
CHMP3-203ENST00000409225 RBM43Q6ZSC3 357 aaKnown RBP16.05■□□□□ 0.16
CHMP3-203ENST00000409225 RFX6Q8HWS3 928 aa16.05■□□□□ 0.16
CHMP3-203ENST00000409225 IPMKQ8NFU5 416 aa16.05■□□□□ 0.16
CHMP3-203ENST00000409225 NR4A3Q92570 626 aa16.05■□□□□ 0.16
CHMP3-203ENST00000409225 NACC2Q96BF6 587 aa16.05■□□□□ 0.16
CHMP3-203ENST00000409225 TAAR6Q96RI8 345 aa16.05■□□□□ 0.16
CHMP3-203ENST00000409225 COG4Q9H9E3 785 aa16.05■□□□□ 0.16
CHMP3-203ENST00000409225 FKBPLQ9UIM3 349 aa16.05■□□□□ 0.16
CHMP3-203ENST00000409225 CRLS1Q9UJA2 301 aa16.05■□□□□ 0.16
CHMP3-203ENST00000409225 ICKQ9UPZ9 632 aa16.05■□□□□ 0.16
CHMP3-203ENST00000409225 HS3ST3B1Q9Y662 390 aa16.05■□□□□ 0.16
CHMP3-203ENST00000409225 ARL5AQ9Y689 179 aa16.05■□□□□ 0.16
CHMP3-203ENST00000409225 A0A087X0T9 212 aa16.04■□□□□ 0.16
CHMP3-203ENST00000409225 A0A0J9YY10 115 aa16.04■□□□□ 0.16
CHMP3-203ENST00000409225 SRP72O76094 671 aaKnown RBP16.04■□□□□ 0.16
CHMP3-203ENST00000409225 KLHL18O94889 574 aa16.04■□□□□ 0.16
CHMP3-203ENST00000409225 EPOP01588 193 aa16.04■□□□□ 0.16
CHMP3-203ENST00000409225 FAM228BP0C875 321 aa16.04■□□□□ 0.16
CHMP3-203ENST00000409225 RALBP11234 206 aa16.04■□□□□ 0.16
CHMP3-203ENST00000409225 ITGAXP20702 1163 aa16.04■□□□□ 0.16
CHMP3-203ENST00000409225 KRTAP10-9P60411 292 aa16.04■□□□□ 0.16
CHMP3-203ENST00000409225 Q0VFX4 171 aa16.04■□□□□ 0.16
CHMP3-203ENST00000409225 BOP1Q14137 746 aaKnown RBP16.04■□□□□ 0.16
CHMP3-203ENST00000409225 RBBP7Q16576 425 aa16.04■□□□□ 0.16
CHMP3-203ENST00000409225 ALKBH5Q6P6C2 394 aaKnown RBP16.04■□□□□ 0.16
CHMP3-203ENST00000409225 TMEM207Q6UWW9 146 aa16.04■□□□□ 0.16
CHMP3-203ENST00000409225 TTLL10Q6ZVT0 673 aa16.04■□□□□ 0.16
CHMP3-203ENST00000409225 OR4K2Q8NGD2 314 aa16.04■□□□□ 0.16
CHMP3-203ENST00000409225 FKBP10Q96AY3 582 aa16.04■□□□□ 0.16
CHMP3-203ENST00000409225 OXNAD1Q96HP4 312 aaPredicted RBP16.04■□□□□ 0.16
CHMP3-203ENST00000409225 OR2A14Q96R47 310 aa16.04■□□□□ 0.16
CHMP3-203ENST00000409225 TRIM56Q9BRZ2 755 aaKnown RBP16.04■□□□□ 0.16
CHMP3-203ENST00000409225 SOX17Q9H6I2 414 aaPredicted RBP16.04■□□□□ 0.16
CHMP3-203ENST00000409225 SPHK1Q9NYA1 384 aa16.04■□□□□ 0.16
CHMP3-203ENST00000409225 C17orf113A0A1B0GUU1 675 aa16.03■□□□□ 0.16
CHMP3-203ENST00000409225 C3orf70A6NLC5 250 aaPredicted RBP16.03■□□□□ 0.16
CHMP3-203ENST00000409225 UNC5CO95185 931 aa16.03■□□□□ 0.16
CHMP3-203ENST00000409225 ARG2P78540 354 aa16.03■□□□□ 0.16
CHMP3-203ENST00000409225 SRSF11Q05519 484 aaKnown RBP16.03■□□□□ 0.16
CHMP3-203ENST00000409225 WASHC5Q12768 1159 aa16.03■□□□□ 0.16
CHMP3-203ENST00000409225 NKG7Q16617 165 aa16.03■□□□□ 0.16
CHMP3-203ENST00000409225 FILIP1LQ4L180 1135 aa16.03■□□□□ 0.16
CHMP3-203ENST00000409225 MTFR2Q6P444 385 aa16.03■□□□□ 0.16
CHMP3-203ENST00000409225 RPTNQ6XPR3 784 aa16.03■□□□□ 0.16
CHMP3-203ENST00000409225 SPNS3Q6ZMD2 512 aa16.03■□□□□ 0.16
CHMP3-203ENST00000409225 UNC5AQ6ZN44 842 aa16.03■□□□□ 0.16
CHMP3-203ENST00000409225 OVCH1Q7RTY7 1134 aa16.03■□□□□ 0.16
CHMP3-203ENST00000409225 DNAJC22Q8N4W6 341 aa16.03■□□□□ 0.16
CHMP3-203ENST00000409225 TFGQ92734 400 aaPredicted RBP16.03■□□□□ 0.16
CHMP3-203ENST00000409225 DLG3Q92796 817 aa16.03■□□□□ 0.16
CHMP3-203ENST00000409225 POM121Q96HA1 1249 aa16.03■□□□□ 0.16
CHMP3-203ENST00000409225 LMF1Q96S06 567 aa16.03■□□□□ 0.16
CHMP3-203ENST00000409225 SPSB2Q99619 263 aa16.03■□□□□ 0.16
CHMP3-203ENST00000409225 CHRNA10Q9GZZ6 450 aa16.03■□□□□ 0.16
CHMP3-203ENST00000409225 FAM96AQ9H5X1 160 aa16.03■□□□□ 0.16
CHMP3-203ENST00000409225 PLA2G3Q9NZ20 509 aa16.03■□□□□ 0.16
CHMP3-203ENST00000409225 KLHL8Q9P2G9 620 aaPredicted RBP16.03■□□□□ 0.16
CHMP3-203ENST00000409225 PLCL2Q9UPR0 1127 aa16.03■□□□□ 0.16
CHMP3-203ENST00000409225 BZW2Q9Y6E2 419 aaKnown RBP16.03■□□□□ 0.16
CHMP3-203ENST00000409225 A0A1B0GX78 115 aa16.02■□□□□ 0.16
CHMP3-203ENST00000409225 ZNF487B1APH4 448 aa16.02■□□□□ 0.16
CHMP3-203ENST00000409225 PRICKLE3O43900 615 aaPredicted RBP16.02■□□□□ 0.16
CHMP3-203ENST00000409225 CHRM5P08912 532 aaPredicted RBP16.02■□□□□ 0.16
CHMP3-203ENST00000409225 ATP1B2P14415 290 aaPredicted RBP16.02■□□□□ 0.16
CHMP3-203ENST00000409225 ZFXP17010 805 aaPredicted RBP16.02■□□□□ 0.16
CHMP3-203ENST00000409225 SSTR2P30874 369 aa16.02■□□□□ 0.16
CHMP3-203ENST00000409225 CA7P43166 264 aa16.02■□□□□ 0.16
CHMP3-203ENST00000409225 CD151P48509 253 aa16.02■□□□□ 0.16
CHMP3-203ENST00000409225 ZNF449Q6P9G9 518 aa16.02■□□□□ 0.16
CHMP3-203ENST00000409225 COX15Q7KZN9 410 aa16.02■□□□□ 0.16
CHMP3-203ENST00000409225 CDH24Q86UP0 819 aa16.02■□□□□ 0.16
CHMP3-203ENST00000409225 OR11G2Q8NGC1 345 aa16.02■□□□□ 0.16
CHMP3-203ENST00000409225 OR5AR1Q8NGP9 310 aa16.02■□□□□ 0.16
CHMP3-203ENST00000409225 FLVCR1-AS1Q8TAF5 88 aa16.02■□□□□ 0.16
CHMP3-203ENST00000409225 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.02■□□□□ 0.16
CHMP3-203ENST00000409225 MESP1Q9BRJ9 268 aa16.02■□□□□ 0.16
CHMP3-203ENST00000409225 WDR54Q9H977 334 aa16.02■□□□□ 0.16
CHMP3-203ENST00000409225 MRM3Q9HC36 420 aaKnown RBP16.02■□□□□ 0.16
CHMP3-203ENST00000409225 CHMP5Q9NZZ3 219 aa16.02■□□□□ 0.16
CHMP3-203ENST00000409225 CTSFQ9UBX1 484 aa16.02■□□□□ 0.16
CHMP3-203ENST00000409225 C2orf81A6NN90 581 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms