RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 TUBGCP5Q96RT8 1024 aa12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 ACOX2Q99424 681 aa12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 ASH1LQ9NR48 2969 aaKnown RBP12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 CD274Q9NZQ7 290 aa12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 KLHL42Q9P2K6 505 aa12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 FKBPLQ9UIM3 349 aa12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 SLC25A13Q9UJS0 675 aa12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 A6NHS1 94 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 TMEM233B4DJY2 109 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 WASH3PC4AMC7 463 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 H0YJX3 145 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 BTN3A1O00481 513 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 ANGPT2O15123 496 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 RAD51BO15315 384 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 ESRRBO95718 433 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 MT-CO1P00395 513 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 NPPAP01160 153 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 PDHA1P08559 390 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 RPS17P08708 135 aaKnown RBP12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 CHRM1P11229 460 aaPredicted RBP12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 MTHFD2P13995 350 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 UQCRBP14927 111 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 SERPINA4P29622 427 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 WASP42768 502 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 STK19P49842 368 aaPredicted RBP12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 SNRPD1P62314 119 aaKnown RBP12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 SH3BP2P78314 561 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 TIAL1Q01085 375 aaKnown RBP eCLIP12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 LRP8Q14114 963 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 TRIP10Q15642 601 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 TTLL9Q3SXZ7 439 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 UGT3A2Q3SY77 523 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 EOGTQ5NDL2 527 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 PTRHD1Q6GMV3 140 aaKnown RBP12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 SERPINA13PQ6UXR4 307 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 GK5Q6ZS86 529 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 SNX20Q7Z614 316 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 GALNT13Q8IUC8 556 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 RGL4Q8IZJ4 473 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 MYO1HQ8N1T3 1032 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 TRPC4APQ8TEL6 797 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 ZNF483Q8TF39 744 aaPredicted RBP12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 SETD7Q8WTS6 366 aaKnown RBP12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 ISG20Q96AZ6 181 aaKnown RBP12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 TUBGCP3Q96CW5 907 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 MOCOSQ96EN8 888 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 LINGO1Q96FE5 620 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 CRELD1Q96HD1 420 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 EXOC2Q96KP1 924 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 HGH1Q9BTY7 390 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 AKTIPQ9H8T0 292 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 ZFYVE1Q9HBF4 777 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 CAPN10Q9HC96 672 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 CACNA2D2Q9NY47 1150 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 CCDC167Q9P0B6 97 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 SLCO3A1Q9UIG8 710 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 CNOT11Q9UKZ1 510 aaKnown RBP12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 DTNAQ9Y4J8 743 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 STON1Q9Y6Q2 735 aa12.65□□□□□ -0.38
SMARCB1-203ENST00000407082 EIF3FO00303 357 aaPredicted RBP12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 HTRA2O43464 458 aaPredicted RBP12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 JUNP05412 331 aaKnown RBP12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 CBSLP0DN79 551 aa12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 GPX3P22352 226 aa12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 HOXD12P35452 270 aa12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 CBSP35520 551 aa12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 IL12RB1P42701 662 aa12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 KCNC1P48547 511 aa12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 PIK3CGP48736 1102 aa12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 THOP1P52888 689 aa12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 CYP4F3Q08477 520 aa12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 BNIP2Q12982 314 aa12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 MAP7Q14244 749 aa12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 PTPRCAPQ14761 206 aa12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 TSNQ15631 228 aaKnown RBP12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 RBBP7Q16576 425 aa12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 SMU1Q2TAY7 513 aa12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 OGFRL1Q5TC84 451 aaPredicted RBP12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 SLC36A4Q6YBV0 504 aa12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 GPRIN3Q6ZVF9 776 aa12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 RABEPKQ7Z6M1 372 aa12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 MARCH9Q86YJ5 346 aa12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 NAXDQ8IW45 347 aa12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 FUBP1Q96AE4 644 aaKnown RBP12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 ZUFSPQ96AP4 578 aa12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 ULK4Q96C45 1275 aa12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 DUS3LQ96G46 650 aaKnown RBP12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 MRGPRX3Q96LB0 322 aa12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 BIRC8Q96P09 236 aa12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 ZNF382Q96SR6 550 aa12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 NPAS2Q99743 824 aa12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 FAM192AQ9GZU8 254 aa12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 P2RY12Q9H244 342 aa12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 TMEM245Q9H330 911 aa12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 ACSS2Q9NR19 701 aa12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 SUN2Q9UH99 717 aa12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 RAB26Q9ULW5 256 aa12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 HS3ST2Q9Y278 367 aa12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 DNAJC15Q9Y5T4 150 aa12.64□□□□□ -0.39
SMARCB1-203ENST00000407082 ACTL7AQ9Y615 435 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms